You are here

Home

KYF_003030-T1, KYF_003030-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_003030-T1
Unique NameKYF_003030-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:252938..254267-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_003030-T1 ID=KYF_003030-T1|Name=KYF_003030-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1330bp|location=Sequence derived from alignment at ch3:252938..254267- (Aspergillus niger KYF3)
ATGCCAGGCGAAACCAATATACCCCCTCGTCGAGACAGACATGTCTCCAA
AGTCCACATCGCCGACACCCCCATCACCCTCCGGAACTGGCATAAACATG
TCAACTGGCTGAACGTGACCATGATCGTCCTGATCCCCCTCTACGGCTGC
ATCCAAGCTCTCTGGACCCCTCTACGACTAAAAACCGCCATCTGGGCAGT
AGCATACTACTTCTTCACAGCCCTAGGCGTCACAGCAGGTCTGTCCCACC
ACCACCGTACCCCCCTCTCACATCCCCTCTTCTAACCCATCGTAACCAAC
AGGCTACCACCGCCTCTGGGCCCACAGATCCTACACAGCAACCCTCCCCC
TCCGCATCACCCTGGCCCTCGCCGCCGGGGGCTCCGTCCAAGGTTCCGCT
CGCTGGTGGGCACGCCTGCACCGCTCGCACCACCGGTACACAGACACGGA
GCGGGACCCTTACTCCGTACATAAGGGCATCTTCTACGCGCACTTCGGCT
GGATGATACTGAAGCAGAACCCGAAGCGGTTCGGCCGAACCGACATCTCC
GATCTCAACGCCGACCCCGTGGTCGTCTGGCAGCATCGACACTTCCTGAA
GATCGTGGTCCTCATGGGTCTTGTCGTTCCGATGCTTGTCGCAGGCATCT
GGGGTGACTGGTGGGGCGGGTTCGTGTACGCGGGCATCCTGCGCATCTTC
TTCGTGCAGCAGGCCACTTTCTGCGTGAACTCTCTGGCTCACTGGCTCGG
CGAGCAGCCGTTCGATGATCGCAATTCACCCCGTGATCATGTCGTCACGG
CGTTGGCGACGATGGGTGAGGGGTATCATAATTTTCATCACGAGTTTCCG
TCAGATTATCGCAATGCTATTCGGTGGTATCAGTATGATCCGACCAAGTG
GGCCATTTGGTGCTGGGGACAGGTGGGATTGGCGCGTGATTTGAAGATGT
TTCGCGAGAATGAGATTGAGAAGGGGAGGGTGCAGCAGTTACAGAAGAAG
GTGGATAAGAAACGGGCAGAGTTGGATTGGGGGACTCCGTTGAGTGAGTT
ACCGGTTATGGAGTGGGAGGAGTTTGTCGAGAGGGCGAGGAGCAGGGCGT
TAGTCGTTGTTGCTGGGGTGGTGCATGATGTTGAGGACTTTGTAAAGGAA
CATCCTGGTGGGAGGGCCATGATCCAGGCTGGTGTTGGGAAGGATGCGAC
CGCTATGTTCAATGGTGGGGTGTATTATCATTCGAATGCGGCGCATAATC
TGCTGTCGATGATGCGGGTAGCGGTTATTCGGGGTGGGAGTGAGGTGGAG
ATTTGGAAGAGGCCGCAGAAGGAGATGTAG
back to top

Coding sequence (CDS) from alignment at ch3:252938..254267-

>KYF_003030-T1 ID=KYF_003030-T1|Name=KYF_003030-T1|organism=Aspergillus niger KYF3|type=CDS|length=2532bp|location=Sequence derived from alignment at ch3:252938..254267- (Aspergillus niger KYF3)
GCTACCACCGCCTCTGGGCCCACAGATCCTACACAGCAACCCTCCCCCTC
CGCATCACCCTGGCCCTCGCCGCCGGGGGCTCCGTCCAAGGTTCCGCTCG
CTGGTGGGCACGCCTGCACCGCTCGCACCACCGGTACACAGACACGGAGC
GGGACCCTTACTCCGTACATAAGGGCATCTTCTACGCGCACTTCGGCTGG
ATGATACTGAAGCAGAACCCGAAGCGGTTCGGCCGAACCGACATCTCCGA
TCTCAACGCCGACCCCGTGGTCGTCTGGCAGCATCGACACTTCCTGAAGA
TCGTGGTCCTCATGGGTCTTGTCGTTCCGATGCTTGTCGCAGGCATCTGG
GGTGACTGGTGGGGCGGGTTCGTGTACGCGGGCATCCTGCGCATCTTCTT
CGTGCAGCAGGCCACTTTCTGCGTGAACTCTCTGGCTCACTGGCTCGGCG
AGCAGCCGTTCGATGATCGCAATTCACCCCGTGATCATGTCGTCACGGCG
TTGGCGACGATGGGTGAGGGGTATCATAATTTTCATCACGAGTTTCCGTC
AGATTATCGCAATGCTATTCGGTGGTATCAGTATGATCCGACCAAGTGGG
CCATTTGGTGCTGGGGACAGGTGGGATTGGCGCGTGATTTGAAGATGTTT
CGCGAGAATGAGATTGAGAAGGGGAGGGTGCAGCAGTTACAGAAGAAGGT
GGATAAGAAACGGGCAGAGTTGGATTGGGGGACTCCGTTGAGTGAGTTAC
CGGTTATGGAGTGGGAGGAGTTTGTCGAGAGGGCGAGGAGCAGGGCGTTA
GTCGTTGTTGCTGGGGTGGTGCATGATGTTGAGGACTTTGTAAAGGAACA
TCCTGGTGGGAGGGCCATGATCCAGGCTGGTGTTGGGAAGGATGCGACCG
CTATGTTCAATGGTGGGGTGTATTATCATTCGAATGCGGCGCATAATCTG
CTGTCGATGATGCGGGTAGCGGTTATTCGGGGTGGGAGTGAGGTGGAGAT
TTGGAAGAGGCCGCAGAAGGAGATGTAGATGCCAGGCGAAACCAATATAC
CCCCTCGTCGAGACAGACATGTCTCCAAAGTCCACATCGCCGACACCCCC
ATCACCCTCCGGAACTGGCATAAACATGTCAACTGGCTGAACGTGACCAT
GATCGTCCTGATCCCCCTCTACGGCTGCATCCAAGCTCTCTGGACCCCTC
TACGACTAAAAACCGCCATCTGGGCAGTAGCATACTACTTCTTCACAGCC
CTAGGCGTCACAGCAGGCTACCACCGCCTCTGGGCCCACAGATCCTACAC
AGCAACCCTCCCCCTCCGCATCACCCTGGCCCTCGCCGCCGGGGGCTCCG
TCCAAGGTTCCGCTCGCTGGTGGGCACGCCTGCACCGCTCGCACCACCGG
TACACAGACACGGAGCGGGACCCTTACTCCGTACATAAGGGCATCTTCTA
CGCGCACTTCGGCTGGATGATACTGAAGCAGAACCCGAAGCGGTTCGGCC
GAACCGACATCTCCGATCTCAACGCCGACCCCGTGGTCGTCTGGCAGCAT
CGACACTTCCTGAAGATCGTGGTCCTCATGGGTCTTGTCGTTCCGATGCT
TGTCGCAGGCATCTGGGGTGACTGGTGGGGCGGGTTCGTGTACGCGGGCA
TCCTGCGCATCTTCTTCGTGCAGCAGGCCACTTTCTGCGTGAACTCTCTG
GCTCACTGGCTCGGCGAGCAGCCGTTCGATGATCGCAATTCACCCCGTGA
TCATGTCGTCACGGCGTTGGCGACGATGGGTGAGGGGTATCATAATTTTC
ATCACGAGTTTCCGTCAGATTATCGCAATGCTATTCGGTGGTATCAGTAT
GATCCGACCAAGTGGGCCATTTGGTGCTGGGGACAGGTGGGATTGGCGCG
TGATTTGAAGATGTTTCGCGAGAATGAGATTGAGAAGGGGAGGGTGCAGC
AGTTACAGAAGAAGGTGGATAAGAAACGGGCAGAGTTGGATTGGGGGACT
CCGTTGAGTGAGTTACCGGTTATGGAGTGGGAGGAGTTTGTCGAGAGGGC
GAGGAGCAGGGCGTTAGTCGTTGTTGCTGGGGTGGTGCATGATGTTGAGG
ACTTTGTAAAGGAACATCCTGGTGGGAGGGCCATGATCCAGGCTGGTGTT
GGGAAGGATGCGACCGCTATGTTCAATGGTGGGGTGTATTATCATTCGAA
TGCGGCGCATAATCTGCTGTCGATGATGCGGGTAGCGGTTATTCGGGGTG
GGAGTGAGGTGGAGATTTGGAAGAGGCCGCAGAAGGAGATGTAGATGCCA
GGCGAAACCAATATACCCCCTCGTCGAGACAGACATGTCTCCAAAGTCCA
CATCGCCGACACCCCCATCACCCTCCGGAACTGGCATAAACATGTCAACT
GGCTGAACGTGACCATGATCGTCCTGATCCCCCTCTACGGCTGCATCCAA
GCTCTCTGGACCCCTCTACGACTAAAAACCGCCATCTGGGCAGTAGCATA
CTACTTCTTCACAGCCCTAGGCGTCACAGCAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0020037heme binding
GO:0004768stearoyl-CoA 9-desaturase activity
GO:0016717oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water
Vocabulary: Biological Process
TermDefinition
GO:0006629lipid metabolic process
GO:0006636unsaturated fatty acid biosynthetic process
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
OLE1_1KYF_003030Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_003030-T1KYF_003030-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_003030-T1.cdsKYF_003030-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_003030-T1.exon2KYF_003030-T1.exon2Aspergillus niger KYF3exon
KYF_003030-T1.exon1KYF_003030-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
DBxrefInterPro:IPR001522
DBxrefInterPro:IPR018506
DBxrefInterPro:IPR036400
DBxrefInterPro:IPR005804
DBxrefInterPro:IPR009160
DBxrefInterPro:IPR001199
DBxrefInterPro:IPR015876
DBxrefPFAM:PF00487
DBxrefPFAM:PF00173
Productstearoyl-CoA 9-desaturase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:252938..254267 -
Powered by Drupal