You are here

Home

KYF_003039-T1, KYF_003039-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_003039-T1
Unique NameKYF_003039-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:270063..270616-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_003039-T1 ID=KYF_003039-T1|Name=KYF_003039-T1|organism=Aspergillus niger KYF3|type=mRNA|length=554bp|location=Sequence derived from alignment at ch3:270063..270616- (Aspergillus niger KYF3)
ATGTCATCTGGATTAAAAGTCCAACAATCAATTTATTTGCATAGCATTCC
TAGTAGTCCTTCTGAGATCAGTTGCCCACCTCACGCTTTTTTGAAATGTC
ACGATTACTCAAATATACCGCCGCACTCTTCTCCACGCTCCCTGCAACCC
TCGGACAGACCTACACCGATTGTAAACCTCTAGAAAAGACCTGTCCGTTC
GGCACAGGCTCCACACATTCTACTTAAGGCCCCCAAGCTAAATAAATACC
TTCTACTGCGAAACAGGAAGTCCTCGGAAGCTACACAACCCAACTCAAAA
CCGACTACTTCGGCGAAGGCGACTCATCCACCTCCAACCGCTGGTCCTGG
GAGCCCATCGATGACCCCCAATCCAAGTTTCACAACTACACCCTATCTTG
GACAACCGCGGCCCTGACGTGGAGCATCGAAGGCACGCCCACAGGTTTCA
CGAAAAAGACTACTGATATCCGAGGTGGAACCAAGCAACAAGCTTGGACC
AGCGAGATGCGTGATATGCCACGTGACCCTGCGGCCGGGCGCACGATGTA
TTGA
back to top

Coding sequence (CDS) from alignment at ch3:270063..270616-

>KYF_003039-T1 ID=KYF_003039-T1|Name=KYF_003039-T1|organism=Aspergillus niger KYF3|type=CDS|length=918bp|location=Sequence derived from alignment at ch3:270063..270616- (Aspergillus niger KYF3)
GAAGTCCTCGGAAGCTACACAACCCAACTCAAAACCGACTACTTCGGCGA
AGGCGACTCATCCACCTCCAACCGCTGGTCCTGGGAGCCCATCGATGACC
CCCAATCCAAGTTTCACAACTACACCCTATCTTGGACAACCGCGGCCCTG
ACGTGGAGCATCGAAGGCACGCCCACAGGTTTCACGAAAAAGACTACTGA
TATCCGAGGTGGAACCAAGCAACAAGCTTGGACCAGCGAGATGCGTGATA
TGCCACGTGACCCTGCGGCCGGGCGCACGATGTATTGAATGTCATCTGGA
TTAAAAGTCCAACAATCAATTTATTTGCATAGCATTCCTAGTAGTCCTTC
TGAGATCAGTTGCCCACCTCACGCTTTTTTGAAATGTCACGATTACTCAA
ATATACCGCCGCACTCTTCTCCACGCTCCCTGCAACCCTCGGACAGACCT
ACACCGATTGAAGTCCTCGGAAGCTACACAACCCAACTCAAAACCGACTA
CTTCGGCGAAGGCGACTCATCCACCTCCAACCGCTGGTCCTGGGAGCCCA
TCGATGACCCCCAATCCAAGTTTCACAACTACACCCTATCTTGGACAACC
GCGGCCCTGACGTGGAGCATCGAAGGCACGCCCACAGGTTTCACGAAAAA
GACTACTGATATCCGAGGTGGAACCAAGCAACAAGCTTGGACCAGCGAGA
TGCGTGATATGCCACGTGACCCTGCGGCCGGGCGCACGATGTATTGAATG
TCATCTGGATTAAAAGTCCAACAATCAATTTATTTGCATAGCATTCCTAG
TAGTCCTTCTGAGATCAGTTGCCCACCTCACGCTTTTTTGAAATGTCACG
ATTACTCAAATATACCGCCGCACTCTTCTCCACGCTCCCTGCAACCCTCG
GACAGACCTACACCGATT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_003039KYF_003039Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_003039-T1KYF_003039-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_003039-T1.cdsKYF_003039-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_003039-T1.exon2KYF_003039-T1.exon2Aspergillus niger KYF3exon
KYF_003039-T1.exon1KYF_003039-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR013320
DBxrefInterPro:IPR000757
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:270063..270616 -
Powered by Drupal