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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:342207..344360+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_003070-T1 ID=KYF_003070-T1|Name=KYF_003070-T1|organism=Aspergillus niger KYF3|type=mRNA|length=2154bp|location=Sequence derived from alignment at ch3:342207..344360+ (Aspergillus niger KYF3)
ATGGCAAACCTCAACGAACTTTCCACCGAAATTCTGCTGGAAATATTAAG
CTACATAGATTACGACGTCGATCTGACAGCACTTTCACAGACTAATCGTC
GACTTTACAATCTTACAAGCAAATTGATCGATCAGGCCATCCTCCATATC
TTCAATAACAGTGACATCTATCCCAACAAAAGCGGTGCGTTGCACAACGC
AACATTTGATGGAAATGTGGACTGTGTGCGCAGGCTGTTACGACTTGGAA
TTCCCCCAACTTGGAGACGTAGAAAGGGTCATTGTTGGGAACCCATCCAG
ACCGCGGCGACAAGGGGACATGCGAACCTAGTTCGTATGTTCATAGAGCA
CGGCGTCGATCCGAACGCCGTGAAAGACCCTGAACGCTTTAATTTGAACA
GAAATCCTCTTCTGGCCGCAATAAGTGGCGGCCATGAAGAAGTTGTCCGA
GTATTGATTGAACATGGTGTGGATTTGGAATACACCAAGGAGCAAGAGAC
GAATGTGCAGCCTTTATCCGAGGCCACAAGTCGCCTTCGCTACGAGATAG
TGAAACTACTCCTAGATCATGGTTGCAATCCCCGATCACCCGACTTCCTA
TCATGGAGGCCAAGCTCCGCACTCGAGGTGGCTGGTGGTTTGAGCCTGCC
AATTCTGCGTATGTTTGTGGGTCCCGACATACCAGAGGACTACTTCTCTG
CTTCTGAAAACTATTCTCATGATATGGTAATCGAGGCCCTGAGAAAGAGT
AATCTGCCCCTGGTCAGGTTTCTTGTGGAGCACGGTGCCGAATTCAATTA
TCGTCAGCCGAATCATTGCCAAGGCCTTCCTTCTCAGATGTACCTATGGG
GTGACGTTTTGTACCACCTCGGCCGCTTGTCAGTCAAATGTTCTGAAGAC
GCAGGTTACTTGCTTCGAAACATAGATGTTGATAACATCATCACTGAAAG
AAATATCACTGCGATTATGGGTCTGGCTATTGGTGCGGCACGTGGTGGCA
ATATAGGTCTGCTAAAGCGTTTAATAGGCCTTGACTGGATACAGAGTCAC
CCAATGATTGAGCCAGAAATCTGGAAAGATCTTATGACCACGTGTATGGC
AGAGGCAGTTTTTGGAGGCCATCTCGAAATTGTCAGACTATCACTCAATC
GCGGAGCAGATCCCGACGATCCAGCCTATTGGAACCGGACCGAAGGAGTA
CGCGATCGGCCTATCCACAATGCAATAAGAAAAGGATATACGAAGATTCT
CGAGTTACTGCTCGATAGAGGAGCCAATGCGTTCCCAAAGGGTGGCAAGA
CTGCTTTTGAAAAAACAACCACTCGATATGCACCAAAATTAACGCGGCAG
GCACGGTATGATATCGTCCAGCTTCTAGTGAACAGAGGCCTCGTTGAAGC
GGACCAAGTTTGGGTGCAAAGAGGCTTCTCTGAACCGCAAGTACCGGAGC
GAAGAACTATCAAAAGAGCCGTTCGCTGGGGGCCAAAGATATTCCGCCTA
ATTCAGCAGCATTTCGACGTCAAACTTGATGTGGGCAACGCCAACCATCA
GTTGGCATTTGAGGAAGCTGTTGAACGAGGTGACATTGCAATTTTGAAGG
AATTTCTTGAGGCAGGATTTAATCCCAACGTTCCCGACGGGCTTCTGATT
ACCGCAGCAGAAAGCGACCGGAGCCATGACGCTACAGAGCAAGTTGTTGA
CCTACTACTCTTGTACGGAGCGGATATCAATTTACGCGATACGGAAACAG
ATATGCCGTATATCTTCAGGGGCATACATGGCCTCAAGTATTGCTCAGAG
GAGGTTATCAGGTTTCTTTTGCGAAAGGGCGCCGATCCGTTTAGTGTCGA
CCGGTCCGGAGAGCATCTATTCATTAAGGTAGCAGCGGAAGGTCAAACGG
ACACAGTGAAAGGCGTGCTGGGGCACTTTGATAATGAAGGGATTCCGTTT
GCTCGGGTCAAATCTATGGTTGAGAAGGCTGCAAGAGCCGCAGGTAGTGC
CGCGAAGGCTGCCATGACTTCAGCGTATGAAATGAAGCCCGATACTTACA
ATATTAGGAATGACGCGCTTTATTATGCCAGAGAAACTGCCACAGTGGAG
GAGTACCTATGGCGCTGGTATTGGCACAGAATGTATCCTTGTCAGGAGAG
CTAA back to topCoding sequence (CDS) from alignment at ch3:342207..344360+ >KYF_003070-T1 ID=KYF_003070-T1|Name=KYF_003070-T1|organism=Aspergillus niger KYF3|type=CDS|length=2154bp|location=Sequence derived from alignment at ch3:342207..344360+ (Aspergillus niger KYF3)
ATGGCAAACCTCAACGAACTTTCCACCGAAATTCTGCTGGAAATATTAAG
CTACATAGATTACGACGTCGATCTGACAGCACTTTCACAGACTAATCGTC
GACTTTACAATCTTACAAGCAAATTGATCGATCAGGCCATCCTCCATATC
TTCAATAACAGTGACATCTATCCCAACAAAAGCGGTGCGTTGCACAACGC
AACATTTGATGGAAATGTGGACTGTGTGCGCAGGCTGTTACGACTTGGAA
TTCCCCCAACTTGGAGACGTAGAAAGGGTCATTGTTGGGAACCCATCCAG
ACCGCGGCGACAAGGGGACATGCGAACCTAGTTCGTATGTTCATAGAGCA
CGGCGTCGATCCGAACGCCGTGAAAGACCCTGAACGCTTTAATTTGAACA
GAAATCCTCTTCTGGCCGCAATAAGTGGCGGCCATGAAGAAGTTGTCCGA
GTATTGATTGAACATGGTGTGGATTTGGAATACACCAAGGAGCAAGAGAC
GAATGTGCAGCCTTTATCCGAGGCCACAAGTCGCCTTCGCTACGAGATAG
TGAAACTACTCCTAGATCATGGTTGCAATCCCCGATCACCCGACTTCCTA
TCATGGAGGCCAAGCTCCGCACTCGAGGTGGCTGGTGGTTTGAGCCTGCC
AATTCTGCGTATGTTTGTGGGTCCCGACATACCAGAGGACTACTTCTCTG
CTTCTGAAAACTATTCTCATGATATGGTAATCGAGGCCCTGAGAAAGAGT
AATCTGCCCCTGGTCAGGTTTCTTGTGGAGCACGGTGCCGAATTCAATTA
TCGTCAGCCGAATCATTGCCAAGGCCTTCCTTCTCAGATGTACCTATGGG
GTGACGTTTTGTACCACCTCGGCCGCTTGTCAGTCAAATGTTCTGAAGAC
GCAGGTTACTTGCTTCGAAACATAGATGTTGATAACATCATCACTGAAAG
AAATATCACTGCGATTATGGGTCTGGCTATTGGTGCGGCACGTGGTGGCA
ATATAGGTCTGCTAAAGCGTTTAATAGGCCTTGACTGGATACAGAGTCAC
CCAATGATTGAGCCAGAAATCTGGAAAGATCTTATGACCACGTGTATGGC
AGAGGCAGTTTTTGGAGGCCATCTCGAAATTGTCAGACTATCACTCAATC
GCGGAGCAGATCCCGACGATCCAGCCTATTGGAACCGGACCGAAGGAGTA
CGCGATCGGCCTATCCACAATGCAATAAGAAAAGGATATACGAAGATTCT
CGAGTTACTGCTCGATAGAGGAGCCAATGCGTTCCCAAAGGGTGGCAAGA
CTGCTTTTGAAAAAACAACCACTCGATATGCACCAAAATTAACGCGGCAG
GCACGGTATGATATCGTCCAGCTTCTAGTGAACAGAGGCCTCGTTGAAGC
GGACCAAGTTTGGGTGCAAAGAGGCTTCTCTGAACCGCAAGTACCGGAGC
GAAGAACTATCAAAAGAGCCGTTCGCTGGGGGCCAAAGATATTCCGCCTA
ATTCAGCAGCATTTCGACGTCAAACTTGATGTGGGCAACGCCAACCATCA
GTTGGCATTTGAGGAAGCTGTTGAACGAGGTGACATTGCAATTTTGAAGG
AATTTCTTGAGGCAGGATTTAATCCCAACGTTCCCGACGGGCTTCTGATT
ACCGCAGCAGAAAGCGACCGGAGCCATGACGCTACAGAGCAAGTTGTTGA
CCTACTACTCTTGTACGGAGCGGATATCAATTTACGCGATACGGAAACAG
ATATGCCGTATATCTTCAGGGGCATACATGGCCTCAAGTATTGCTCAGAG
GAGGTTATCAGGTTTCTTTTGCGAAAGGGCGCCGATCCGTTTAGTGTCGA
CCGGTCCGGAGAGCATCTATTCATTAAGGTAGCAGCGGAAGGTCAAACGG
ACACAGTGAAAGGCGTGCTGGGGCACTTTGATAATGAAGGGATTCCGTTT
GCTCGGGTCAAATCTATGGTTGAGAAGGCTGCAAGAGCCGCAGGTAGTGC
CGCGAAGGCTGCCATGACTTCAGCGTATGAAATGAAGCCCGATACTTACA
ATATTAGGAATGACGCGCTTTATTATGCCAGAGAAACTGCCACAGTGGAG
GAGTACCTATGGCGCTGGTATTGGCACAGAATGTATCCTTGTCAGGAGAG
CTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036770 |
| DBxref | InterPro:IPR020683 |
| DBxref | InterPro:IPR002110 |
| DBxref | PFAM:PF13637 |
| DBxref | PFAM:PF12796 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:342207..344360 + |
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