You are here

Home

KYF_003079-T1, KYF_003079-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_003079-T1
Unique NameKYF_003079-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:368983..370688-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_003079-T1 ID=KYF_003079-T1|Name=KYF_003079-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1706bp|location=Sequence derived from alignment at ch3:368983..370688- (Aspergillus niger KYF3)
ATGTCTTCCGAGAAAGACTTTGGCGGCGAGAAAGTTGCCAATGACCCCAA
GTCTAGTCTGGATCTGAAGTCCGATGCCAAACATATTGAAGTTGCCGATA
ATGCAACTGATGTCGAGGCTCTGGCAGCCAGTGTCAATGACCTGCCCATT
ACTTGGTTCGTGTGGGTGGTGGCCCTAACCGCCTCCATTGCCGGCATGTT
GTTTGGTTACGACACGGGTATTATTTCCGGGGTGTTGGTGGTGCTCAAGG
ACGACCTGAACAATCGTCCAGTGACCAGCTCTGAGAAAGAAATGATCACC
TCGCTCTGCTCCGGGGGTGCCTTCATCGGGGCGATTTTCGCTGGTAACAC
CGCAGACCGAGTAAGTTGCTTCCTGCGCGGCCGCAAAAGCAAAAGGCACC
TAACTAACCCAATCCGCAGTTTGGTCGCAAGATGGCCATCTACCTCGGCT
GCGTGCTCTTCGTCGTTGGCTCTGTTCTCCAGGCTGCCGCCTATACGATC
GCGCAGATGGCGGTGGGTCGCGTAGTGGTCGGGCTGGGCGTAGGCTCGGC
GGCGATGGTGGTGCCGCTGTACGTTGCGGAGATCGCACCCGCGGGCGCCC
GCGGTCGCCTAATTGGGCTAAACAACATGTCCATCACCGGAGGACAGGTC
ATCTCTTATGCAATCGGAGCGGCCTTTGCGAATGTCAGCCACGGTTGGCG
CTACATGGTCGGCCTGGGCGCTCTCCCCGCCATTATCCTCGGCTGTATGA
TGCCGTTTTGTCCCGAATCGCCTCGCCATCTCATCTACAACGGGCGCGAC
GAAGAAGCCCGCGGCGTCCTGTGTCGCATCTACAGCAGCGCTGCGACGGA
CGAGCAGATTGCCGCGCTGTTGGTCACGATCCGTGCGGCCTGCGATCAGG
CGCGCGAGATCAACGACACGGGTAGCCGATGGTCCAAGATCGTGAAATTA
CATACCGTGGGGAGTAATTTGCGCGCGTTGATTAGTGCGTGCGGGTTAAT
GGTCATCTCGCAAATGAGTGGGTTCAATGCCCTTATGTACTACTCTTCGA
CCCTGTTTGCGTTGGTGGGGTTCAACAACTCGACAGCCGTGGGGTTAGTG
GTCGCGGGCACCAACTTTATCATGACTTGGGTGAACATGATGGTGGTGGA
TGGCTGGGGTCGCCGACGCTTGCTCCTGGCGACCGCCTGGGGAATGGCGG
TGGGGATGGCCGCCGTTGCGATCGCTTTCCACTGGGTTCCCGTCGATATG
GAAACGCTAGAACCCCTCAACCCGGGAGTCTCTCCGGCGGCTATCGTCAT
TCTGGTGTTTATCATCTGGTTCGTGGTGTTCTATGGGGTGTCGGTCGGCA
ACACCGCCTGGATGAGCACCGACTTCTTCCCGCTGGAGGTGCGCGCCATG
GGCACCATGTGGATGACCTGCTCGAACTGGGGCAGCAACGTTATTGTCTC
CAGCACCTTCCTTACCATGGCCAAATCAATGACTCCCTCTGGAGCATTCG
GCTTCTACGCGGCGCTGTGCGGCGTTTCCTACGTCTGGATTTATTTCTTC
TATCCCGAGGTGTCCGGCCTCGTGCTGGAAGAAGTCCAGGAAGTGTTCCA
GCACGGGTTCGGGGTCCGGTACGCCCGACAGCTGCGCAAGGAGCGAAAAG
ACATCATCGAGGAGCGGATGCGAAGTGCGGACAAGCCGATTCCAATGGGC
CATTAG
back to top

Coding sequence (CDS) from alignment at ch3:368983..370688-

>KYF_003079-T1 ID=KYF_003079-T1|Name=KYF_003079-T1|organism=Aspergillus niger KYF3|type=CDS|length=3294bp|location=Sequence derived from alignment at ch3:368983..370688- (Aspergillus niger KYF3)
TTTGGTCGCAAGATGGCCATCTACCTCGGCTGCGTGCTCTTCGTCGTTGG
CTCTGTTCTCCAGGCTGCCGCCTATACGATCGCGCAGATGGCGGTGGGTC
GCGTAGTGGTCGGGCTGGGCGTAGGCTCGGCGGCGATGGTGGTGCCGCTG
TACGTTGCGGAGATCGCACCCGCGGGCGCCCGCGGTCGCCTAATTGGGCT
AAACAACATGTCCATCACCGGAGGACAGGTCATCTCTTATGCAATCGGAG
CGGCCTTTGCGAATGTCAGCCACGGTTGGCGCTACATGGTCGGCCTGGGC
GCTCTCCCCGCCATTATCCTCGGCTGTATGATGCCGTTTTGTCCCGAATC
GCCTCGCCATCTCATCTACAACGGGCGCGACGAAGAAGCCCGCGGCGTCC
TGTGTCGCATCTACAGCAGCGCTGCGACGGACGAGCAGATTGCCGCGCTG
TTGGTCACGATCCGTGCGGCCTGCGATCAGGCGCGCGAGATCAACGACAC
GGGTAGCCGATGGTCCAAGATCGTGAAATTACATACCGTGGGGAGTAATT
TGCGCGCGTTGATTAGTGCGTGCGGGTTAATGGTCATCTCGCAAATGAGT
GGGTTCAATGCCCTTATGTACTACTCTTCGACCCTGTTTGCGTTGGTGGG
GTTCAACAACTCGACAGCCGTGGGGTTAGTGGTCGCGGGCACCAACTTTA
TCATGACTTGGGTGAACATGATGGTGGTGGATGGCTGGGGTCGCCGACGC
TTGCTCCTGGCGACCGCCTGGGGAATGGCGGTGGGGATGGCCGCCGTTGC
GATCGCTTTCCACTGGGTTCCCGTCGATATGGAAACGCTAGAACCCCTCA
ACCCGGGAGTCTCTCCGGCGGCTATCGTCATTCTGGTGTTTATCATCTGG
TTCGTGGTGTTCTATGGGGTGTCGGTCGGCAACACCGCCTGGATGAGCAC
CGACTTCTTCCCGCTGGAGGTGCGCGCCATGGGCACCATGTGGATGACCT
GCTCGAACTGGGGCAGCAACGTTATTGTCTCCAGCACCTTCCTTACCATG
GCCAAATCAATGACTCCCTCTGGAGCATTCGGCTTCTACGCGGCGCTGTG
CGGCGTTTCCTACGTCTGGATTTATTTCTTCTATCCCGAGGTGTCCGGCC
TCGTGCTGGAAGAAGTCCAGGAAGTGTTCCAGCACGGGTTCGGGGTCCGG
TACGCCCGACAGCTGCGCAAGGAGCGAAAAGACATCATCGAGGAGCGGAT
GCGAAGTGCGGACAAGCCGATTCCAATGGGCCATTAGATGTCTTCCGAGA
AAGACTTTGGCGGCGAGAAAGTTGCCAATGACCCCAAGTCTAGTCTGGAT
CTGAAGTCCGATGCCAAACATATTGAAGTTGCCGATAATGCAACTGATGT
CGAGGCTCTGGCAGCCAGTGTCAATGACCTGCCCATTACTTGGTTCGTGT
GGGTGGTGGCCCTAACCGCCTCCATTGCCGGCATGTTGTTTGGTTACGAC
ACGGGTATTATTTCCGGGGTGTTGGTGGTGCTCAAGGACGACCTGAACAA
TCGTCCAGTGACCAGCTCTGAGAAAGAAATGATCACCTCGCTCTGCTCCG
GGGGTGCCTTCATCGGGGCGATTTTCGCTGGTAACACCGCAGACCGATTT
GGTCGCAAGATGGCCATCTACCTCGGCTGCGTGCTCTTCGTCGTTGGCTC
TGTTCTCCAGGCTGCCGCCTATACGATCGCGCAGATGGCGGTGGGTCGCG
TAGTGGTCGGGCTGGGCGTAGGCTCGGCGGCGATGGTGGTGCCGCTGTAC
GTTGCGGAGATCGCACCCGCGGGCGCCCGCGGTCGCCTAATTGGGCTAAA
CAACATGTCCATCACCGGAGGACAGGTCATCTCTTATGCAATCGGAGCGG
CCTTTGCGAATGTCAGCCACGGTTGGCGCTACATGGTCGGCCTGGGCGCT
CTCCCCGCCATTATCCTCGGCTGTATGATGCCGTTTTGTCCCGAATCGCC
TCGCCATCTCATCTACAACGGGCGCGACGAAGAAGCCCGCGGCGTCCTGT
GTCGCATCTACAGCAGCGCTGCGACGGACGAGCAGATTGCCGCGCTGTTG
GTCACGATCCGTGCGGCCTGCGATCAGGCGCGCGAGATCAACGACACGGG
TAGCCGATGGTCCAAGATCGTGAAATTACATACCGTGGGGAGTAATTTGC
GCGCGTTGATTAGTGCGTGCGGGTTAATGGTCATCTCGCAAATGAGTGGG
TTCAATGCCCTTATGTACTACTCTTCGACCCTGTTTGCGTTGGTGGGGTT
CAACAACTCGACAGCCGTGGGGTTAGTGGTCGCGGGCACCAACTTTATCA
TGACTTGGGTGAACATGATGGTGGTGGATGGCTGGGGTCGCCGACGCTTG
CTCCTGGCGACCGCCTGGGGAATGGCGGTGGGGATGGCCGCCGTTGCGAT
CGCTTTCCACTGGGTTCCCGTCGATATGGAAACGCTAGAACCCCTCAACC
CGGGAGTCTCTCCGGCGGCTATCGTCATTCTGGTGTTTATCATCTGGTTC
GTGGTGTTCTATGGGGTGTCGGTCGGCAACACCGCCTGGATGAGCACCGA
CTTCTTCCCGCTGGAGGTGCGCGCCATGGGCACCATGTGGATGACCTGCT
CGAACTGGGGCAGCAACGTTATTGTCTCCAGCACCTTCCTTACCATGGCC
AAATCAATGACTCCCTCTGGAGCATTCGGCTTCTACGCGGCGCTGTGCGG
CGTTTCCTACGTCTGGATTTATTTCTTCTATCCCGAGGTGTCCGGCCTCG
TGCTGGAAGAAGTCCAGGAAGTGTTCCAGCACGGGTTCGGGGTCCGGTAC
GCCCGACAGCTGCGCAAGGAGCGAAAAGACATCATCGAGGAGCGGATGCG
AAGTGCGGACAAGCCGATTCCAATGGGCCATTAGATGTCTTCCGAGAAAG
ACTTTGGCGGCGAGAAAGTTGCCAATGACCCCAAGTCTAGTCTGGATCTG
AAGTCCGATGCCAAACATATTGAAGTTGCCGATAATGCAACTGATGTCGA
GGCTCTGGCAGCCAGTGTCAATGACCTGCCCATTACTTGGTTCGTGTGGG
TGGTGGCCCTAACCGCCTCCATTGCCGGCATGTTGTTTGGTTACGACACG
GGTATTATTTCCGGGGTGTTGGTGGTGCTCAAGGACGACCTGAACAATCG
TCCAGTGACCAGCTCTGAGAAAGAAATGATCACCTCGCTCTGCTCCGGGG
GTGCCTTCATCGGGGCGATTTTCGCTGGTAACACCGCAGACCGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_003079KYF_003079Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_003079-T1KYF_003079-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_003079-T1.cdsKYF_003079-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_003079-T1.exon2KYF_003079-T1.exon2Aspergillus niger KYF3exon
KYF_003079-T1.exon1KYF_003079-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR005829
DBxrefInterPro:IPR005828
DBxrefInterPro:IPR003663
DBxrefPFAM:PF00083
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:368983..370688 -
Powered by Drupal