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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:506562..507696- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_003109-T1 ID=KYF_003109-T1|Name=KYF_003109-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1135bp|location=Sequence derived from alignment at ch3:506562..507696- (Aspergillus niger KYF3)
ATGGCCGACATCACTGCCGTCGGTGAGGAGAACCCTTCTCCTACTCAGGA
CGACCTGCAGCAGGCCGCCGGTAACGGCGCCGCTGACAACCGCGGCACCA
AGCGCTCTCGCATGAGCGCCGACGACGACGACGATGATGATGACAAGCCC
GGTCGCGAGCGCAGAAAGATTGAGATCAAATTCATTCAGGATAAGTCGCG
TCGCCACATCACCTTCTCCAAGCGGAAGGCGGGTATCATGAAGAAGGTGC
GTGCTGTCGCGTCTCTGCAGCCTCATCTCTCCCCTTCGTTATCGCCGTCA
ATTCTGTCGCCAACTCTAGTCTTTTCATGATGCGTCTTTTCTCGTCGTTG
TCAAGCTTGTTTTGCACGTTGTCTGCCTGGAACTATTGCCGTTGGATCGG
TGCTGACGCCTCAATGCGGTCGCAAAACAGGCCTACGAACTCTCCGTTCT
CACAGGTACCCAAGTACTCCTCCTGGTGGTGTCCGAGACCGGTCTCGTCT
ATACTTTCACCACCCCGAAGCTTCAACCGCTGGTGACCAAGGCTGAGGGC
AAGAACCTCATTCAGGTGAGTGCTGTGCCACTGCTTCCTCTCGTCTACGC
GAGTCGAACTCAACGCGACTGACTCCCTCCGTTTCCCATGTACAGGCCTG
CCTGAATGCACCTGATCCCACTACCAATGAGAATGGCGTTGATGCGCCCG
AGGTGCCGGCTGAGACGCCAGAGGATGTCAGCCACAGCAATGTCAACCCT
CAACAGTCGAATATCCCCCGTCCCGCCGGTATGCACCCCGGCTACATGAC
GAACGAACAACAGCAGCAGATGGCCTACTACCAGGGCCTTCAGCAGCAAC
AGCAGGCAGGAGGACAGTATCCTGGCATGCCTGTGGGTAACCGGATGCCA
CCTCAGCACCAGCCCACGGCGTAAGCGGTGGCTATGTGTCTTCATGCCCC
GCGTTTTCAAGCACCTGAGGGGCCCAGACAGTTGTTCGCATCCTTGTCAA
CTCCAGCGCGTGCAGCTTTCCTCTACGGCCTTCCTTTGATACCCAACGAT
TTGTTTCCAGACATAATTCATACTATTAAAACCGGTCTACAGTGTTGTAC
CGCCGCGCAACTCAGAACGAAGAACGGAGAGATGA back to topCoding sequence (CDS) from alignment at ch3:506562..507696- >KYF_003109-T1 ID=KYF_003109-T1|Name=KYF_003109-T1|organism=Aspergillus niger KYF3|type=CDS|length=2796bp|location=Sequence derived from alignment at ch3:506562..507696- (Aspergillus niger KYF3)
TGTTGTACCGCCGCGCAACTCAGAACGAAGAACGGAGAGATGAGCCTGCC
TGAATGCACCTGATCCCACTACCAATGAGAATGGCGTTGATGCGCCCGAG
GTGCCGGCTGAGACGCCAGAGGATGTCAGCCACAGCAATGTCAACCCTCA
ACAGTCGAATATCCCCCGTCCCGCCGGTATGCACCCCGGCTACATGACGA
ACGAACAACAGCAGCAGATGGCCTACTACCAGGGCCTTCAGCAGCAACAG
CAGGCAGGAGGACAGTATCCTGGCATGCCTGTGGGTAACCGGATGCCACC
TCAGCACCAGCCCACGGCGCCTACGAACTCTCCGTTCTCACAGGTACCCA
AGTACTCCTCCTGGTGGTGTCCGAGACCGGTCTCGTCTATACTTTCACCA
CCCCGAAGCTTCAACCGCTGGTGACCAAGGCTGAGGGCAAGAACCTCATT
CAGATGGCCGACATCACTGCCGTCGGTGAGGAGAACCCTTCTCCTACTCA
GGACGACCTGCAGCAGGCCGCCGGTAACGGCGCCGCTGACAACCGCGGCA
CCAAGCGCTCTCGCATGAGCGCCGACGACGACGACGATGATGATGACAAG
CCCGGTCGCGAGCGCAGAAAGATTGAGATCAAATTCATTCAGGATAAGTC
GCGTCGCCACATCACCTTCTCCAAGCGGAAGGCGGGTATCATGAAGAAGT
GTTGTACCGCCGCGCAACTCAGAACGAAGAACGGAGAGATGAGCCTGCCT
GAATGCACCTGATCCCACTACCAATGAGAATGGCGTTGATGCGCCCGAGG
TGCCGGCTGAGACGCCAGAGGATGTCAGCCACAGCAATGTCAACCCTCAA
CAGTCGAATATCCCCCGTCCCGCCGGTATGCACCCCGGCTACATGACGAA
CGAACAACAGCAGCAGATGGCCTACTACCAGGGCCTTCAGCAGCAACAGC
AGGCAGGAGGACAGTATCCTGGCATGCCTGTGGGTAACCGGATGCCACCT
CAGCACCAGCCCACGGCGCCTACGAACTCTCCGTTCTCACAGGTACCCAA
GTACTCCTCCTGGTGGTGTCCGAGACCGGTCTCGTCTATACTTTCACCAC
CCCGAAGCTTCAACCGCTGGTGACCAAGGCTGAGGGCAAGAACCTCATTC
AGATGGCCGACATCACTGCCGTCGGTGAGGAGAACCCTTCTCCTACTCAG
GACGACCTGCAGCAGGCCGCCGGTAACGGCGCCGCTGACAACCGCGGCAC
CAAGCGCTCTCGCATGAGCGCCGACGACGACGACGATGATGATGACAAGC
CCGGTCGCGAGCGCAGAAAGATTGAGATCAAATTCATTCAGGATAAGTCG
CGTCGCCACATCACCTTCTCCAAGCGGAAGGCGGGTATCATGAAGAAGTG
TTGTACCGCCGCGCAACTCAGAACGAAGAACGGAGAGATGAGCCTGCCTG
AATGCACCTGATCCCACTACCAATGAGAATGGCGTTGATGCGCCCGAGGT
GCCGGCTGAGACGCCAGAGGATGTCAGCCACAGCAATGTCAACCCTCAAC
AGTCGAATATCCCCCGTCCCGCCGGTATGCACCCCGGCTACATGACGAAC
GAACAACAGCAGCAGATGGCCTACTACCAGGGCCTTCAGCAGCAACAGCA
GGCAGGAGGACAGTATCCTGGCATGCCTGTGGGTAACCGGATGCCACCTC
AGCACCAGCCCACGGCGCCTACGAACTCTCCGTTCTCACAGGTACCCAAG
TACTCCTCCTGGTGGTGTCCGAGACCGGTCTCGTCTATACTTTCACCACC
CCGAAGCTTCAACCGCTGGTGACCAAGGCTGAGGGCAAGAACCTCATTCA
GATGGCCGACATCACTGCCGTCGGTGAGGAGAACCCTTCTCCTACTCAGG
ACGACCTGCAGCAGGCCGCCGGTAACGGCGCCGCTGACAACCGCGGCACC
AAGCGCTCTCGCATGAGCGCCGACGACGACGACGATGATGATGACAAGCC
CGGTCGCGAGCGCAGAAAGATTGAGATCAAATTCATTCAGGATAAGTCGC
GTCGCCACATCACCTTCTCCAAGCGGAAGGCGGGTATCATGAAGAAGTGT
TGTACCGCCGCGCAACTCAGAACGAAGAACGGAGAGATGAGCCTGCCTGA
ATGCACCTGATCCCACTACCAATGAGAATGGCGTTGATGCGCCCGAGGTG
CCGGCTGAGACGCCAGAGGATGTCAGCCACAGCAATGTCAACCCTCAACA
GTCGAATATCCCCCGTCCCGCCGGTATGCACCCCGGCTACATGACGAACG
AACAACAGCAGCAGATGGCCTACTACCAGGGCCTTCAGCAGCAACAGCAG
GCAGGAGGACAGTATCCTGGCATGCCTGTGGGTAACCGGATGCCACCTCA
GCACCAGCCCACGGCGCCTACGAACTCTCCGTTCTCACAGGTACCCAAGT
ACTCCTCCTGGTGGTGTCCGAGACCGGTCTCGTCTATACTTTCACCACCC
CGAAGCTTCAACCGCTGGTGACCAAGGCTGAGGGCAAGAACCTCATTCAG
ATGGCCGACATCACTGCCGTCGGTGAGGAGAACCCTTCTCCTACTCAGGA
CGACCTGCAGCAGGCCGCCGGTAACGGCGCCGCTGACAACCGCGGCACCA
AGCGCTCTCGCATGAGCGCCGACGACGACGACGATGATGATGACAAGCCC
GGTCGCGAGCGCAGAAAGATTGAGATCAAATTCATTCAGGATAAGTCGCG
TCGCCACATCACCTTCTCCAAGCGGAAGGCGGGTATCATGAAGAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0045944 | positive regulation of transcription by RNA polymerase II |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000987 | cis-regulatory region sequence-specific DNA binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0046983 | protein dimerization activity |
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR033897 |
| DBxref | InterPro:IPR036879 |
| DBxref | InterPro:IPR002100 |
| DBxref | PFAM:PF00319 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:506562..507696 - |
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