|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:687494..688875+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_003163-T1 ID=KYF_003163-T1|Name=KYF_003163-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1382bp|location=Sequence derived from alignment at ch3:687494..688875+ (Aspergillus niger KYF3)
ATGTTGGTCTCCTTGACAGTCGGCAAGGTAGACGCAGGAGTCGCTGTACT
CTTGACCCAGGACAACAGACTGGTGAGTTCAATTTCCATCCCCACACACT
TACAGCAAGCGATTGACGCACGAGCCTGCACGATATTGCCTCAAAATAAT
CCACTCTTCTTTCAGAGTAGCCCTGATACTCAACTAACCCGCCCCAGATC
GAATTTCCCTCCGTCCTTCTCCCCAGCAACATCACGTCCGGTAGTATCGT
CGACATCACCGTCGCGCGCAACCACACAGCCGAATCCGCCAGTGCCGCCA
ACTTCCAGTCGCTCCAAAAACGCATCCTCAATACCTACGGCATCAAGACC
CCCACACCCCCGGTTCTCCGTCTCCGCAACGCAACTCAAACTTCCCTCGT
CTTGGAATGGGAACCTATTGACCTAGCCACCGCATCCCTGAAATCACTCT
CCCTGTACCGCAATGGCTCTAAAGCCGGATCCATTCCCCGTCCGCTTGAG
ACGCGAAGCACCAAAATTAGCGGTCTAGCCATCCACACCGAATACACCTT
CCATCTCGTCCTGCGCACCACCGCCGGCACCTACCAGTCGGAGAAGCTGA
CTTGCCGCACGCACAAGATGACGGATCTCTCCGGTATCACGGTGACGGCG
GGTGTCCTTCCCCCGCAACAGAAGGATGCTCTTGCAGCTGCGTTGGATCG
CATCGGTGGAAAGCTGATCGACTCGGTCCGCATTGATACCACCCACTTTG
TCTGTACGGAGGGGAGAGGCCCGCTCTGGGAGAAGGCGGTTGAGATGAAT
ATTCCCGTGGTCGTTCCGGAGTGGGTGGATGCTTGCGAGGCCGAAGGCAC
TATTGTCAGTGTTCGCGGGTATTACCTGAATGCTGACCCCAAGGCAAGAC
AGCTGGGCCCGATTCACAGCTCTACGCAGCATCAGCGAACGGTTTCTACT
GCCACTTCGAACCTGGCGCCCCCGGCTGCGCAGGCTCAGACCCCATCACG
GCAGGCGGCGCAGGAAGACGAGCAGAACGTTGAGCCTCCGGTTACGCCGT
TCCCGGGAGCCGAGATGACCGGCCAGCCCATCGCGGAAGAGAAGGAGGTG
GGATCGGACGAGAGTACAGAGTCGCCGCCACCTCCACCTCCGAAGGATGA
AGAAAAGGAGGATGAAACTGCCGAGCAGAATGGTGATCACGAGACACCGC
CATCTCCGCCGGAGAAGGACGAGGACGAGGGCGAAGGCAAGGACGAGGAA
GAGAAGACCGAAGAGAACACGCGAGAGCAAGAAGAGGAAGAGGAAGAGGA
AGAGAAAGGCGACTCATCAAATACCAAAGAGCGCAAATCAAAGGAGGGTG
GAGAAGGGGACTTTAATGAAGTCCCTCTGTAA back to topCoding sequence (CDS) from alignment at ch3:687494..688875+ >KYF_003163-T1 ID=KYF_003163-T1|Name=KYF_003163-T1|organism=Aspergillus niger KYF3|type=CDS|length=2514bp|location=Sequence derived from alignment at ch3:687494..688875+ (Aspergillus niger KYF3)
ATGTTGGTCTCCTTGACAGTCGGCAAGGTAGACGCAGGAGTCGCTGTACT
CTTGACCCAGGACAACAGACTGATCGAATTTCCCTCCGTCCTTCTCCCCA
GCAACATCACGTCCGGTAGTATCGTCGACATCACCGTCGCGCGCAACCAC
ACAGCCGAATCCGCCAGTGCCGCCAACTTCCAGTCGCTCCAAAAACGCAT
CCTCAATACCTACGGCATCAAGACCCCCACACCCCCGGTTCTCCGTCTCC
GCAACGCAACTCAAACTTCCCTCGTCTTGGAATGGGAACCTATTGACCTA
GCCACCGCATCCCTGAAATCACTCTCCCTGTACCGCAATGGCTCTAAAGC
CGGATCCATTCCCCGTCCGCTTGAGACGCGAAGCACCAAAATTAGCGGTC
TAGCCATCCACACCGAATACACCTTCCATCTCGTCCTGCGCACCACCGCC
GGCACCTACCAGTCGGAGAAGCTGACTTGCCGCACGCACAAGATGACGGA
TCTCTCCGGTATCACGGTGACGGCGGGTGTCCTTCCCCCGCAACAGAAGG
ATGCTCTTGCAGCTGCGTTGGATCGCATCGGTGGAAAGCTGATCGACTCG
GTCCGCATTGATACCACCCACTTTGTCTGTACGGAGGGGAGAGGCCCGCT
CTGGGAGAAGGCGGTTGAGATGAATATTCCCGTGGTCGTTCCGGAGTGGG
TGGATGCTTGCGAGGCCGAAGGCACTATTGTCAGTGTTCGCGGGTATTAC
CTGAATGCTGACCCCAAGGCAAGACAGCTGGGCCCGATTCACAGCTCTAC
GCAGCATCAGCGAACGGTTTCTACTGCCACTTCGAACCTGGCGCCCCCGG
CTGCGCAGGCTCAGACCCCATCACGGCAGGCGGCGCAGGAAGACGAGCAG
AACGTTGAGCCTCCGGTTACGCCGTTCCCGGGAGCCGAGATGACCGGCCA
GCCCATCGCGGAAGAGAAGGAGGTGGGATCGGACGAGAGTACAGAGTCGC
CGCCACCTCCACCTCCGAAGGATGAAGAAAAGGAGGATGAAACTGCCGAG
CAGAATGGTGATCACGAGACACCGCCATCTCCGCCGGAGAAGGACGAGGA
CGAGGGCGAAGGCAAGGACGAGGAAGAGAAGACCGAAGAGAACACGCGAG
AGCAAGAAGAGGAAGAGGAAGAGGAAGAGAAAGGCGACTCATCAAATACC
AAAGAGCGCAAATCAAAGGAGGGTGGAGAAGGGGACTTTAATGAAGTCCC
TCTGTAAATGTTGGTCTCCTTGACAGTCGGCAAGGTAGACGCAGGAGTCG
CTGTACTCTTGACCCAGGACAACAGACTGATCGAATTTCCCTCCGTCCTT
CTCCCCAGCAACATCACGTCCGGTAGTATCGTCGACATCACCGTCGCGCG
CAACCACACAGCCGAATCCGCCAGTGCCGCCAACTTCCAGTCGCTCCAAA
AACGCATCCTCAATACCTACGGCATCAAGACCCCCACACCCCCGGTTCTC
CGTCTCCGCAACGCAACTCAAACTTCCCTCGTCTTGGAATGGGAACCTAT
TGACCTAGCCACCGCATCCCTGAAATCACTCTCCCTGTACCGCAATGGCT
CTAAAGCCGGATCCATTCCCCGTCCGCTTGAGACGCGAAGCACCAAAATT
AGCGGTCTAGCCATCCACACCGAATACACCTTCCATCTCGTCCTGCGCAC
CACCGCCGGCACCTACCAGTCGGAGAAGCTGACTTGCCGCACGCACAAGA
TGACGGATCTCTCCGGTATCACGGTGACGGCGGGTGTCCTTCCCCCGCAA
CAGAAGGATGCTCTTGCAGCTGCGTTGGATCGCATCGGTGGAAAGCTGAT
CGACTCGGTCCGCATTGATACCACCCACTTTGTCTGTACGGAGGGGAGAG
GCCCGCTCTGGGAGAAGGCGGTTGAGATGAATATTCCCGTGGTCGTTCCG
GAGTGGGTGGATGCTTGCGAGGCCGAAGGCACTATTGTCAGTGTTCGCGG
GTATTACCTGAATGCTGACCCCAAGGCAAGACAGCTGGGCCCGATTCACA
GCTCTACGCAGCATCAGCGAACGGTTTCTACTGCCACTTCGAACCTGGCG
CCCCCGGCTGCGCAGGCTCAGACCCCATCACGGCAGGCGGCGCAGGAAGA
CGAGCAGAACGTTGAGCCTCCGGTTACGCCGTTCCCGGGAGCCGAGATGA
CCGGCCAGCCCATCGCGGAAGAGAAGGAGGTGGGATCGGACGAGAGTACA
GAGTCGCCGCCACCTCCACCTCCGAAGGATGAAGAAAAGGAGGATGAAAC
TGCCGAGCAGAATGGTGATCACGAGACACCGCCATCTCCGCCGGAGAAGG
ACGAGGACGAGGGCGAAGGCAAGGACGAGGAAGAGAAGACCGAAGAGAAC
ACGCGAGAGCAAGAAGAGGAAGAGGAAGAGGAAGAGAAAGGCGACTCATC
AAATACCAAAGAGCGCAAATCAAAGGAGGGTGGAGAAGGGGACTTTAATG
AAGTCCCTCTGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
| GO:0046983 | protein dimerization activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092612CC |
| DBxref | InterPro:IPR036116 |
| DBxref | InterPro:IPR003961 |
| DBxref | InterPro:IPR013783 |
| DBxref | InterPro:IPR031669 |
| DBxref | InterPro:IPR031673 |
| DBxref | InterPro:IPR036420 |
| DBxref | InterPro:IPR001357 |
| DBxref | PFAM:PF12738 |
| DBxref | PFAM:PF16893 |
| DBxref | PFAM:PF16892 |
| DBxref | PFAM:PF00533 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:687494..688875 + |
|
