You are here

KYF_003222-T1, KYF_003222-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_003222-T1
Unique NameKYF_003222-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:852315..852901+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_003222-T1 ID=KYF_003222-T1|Name=KYF_003222-T1|organism=Aspergillus niger KYF3|type=mRNA|length=587bp|location=Sequence derived from alignment at ch3:852315..852901+ (Aspergillus niger KYF3)
ATGCCAAGTCATGCCGGTCTCTTCACTGCCTTCACCGGCTGCGTTCTGGC CATCGATAACGACAATCGCCTGACTCTCCACCCGAAAGACCATCAGCCTG GCCTGAGGGATAAGCTCCGAGCTAATGGAGAGTTCTGGCTCTGTCGCGAT GATGGAGTTAGTTGCTCTGTATCCCGATTCGTTGTCAGTGGAAGCTAATG ACTCGTTCTTGTACTCAAAGCTGATTGGGAAGTTCGGAATCCCAGACAAG GTAAATAACTCACCGTTTGCTACCTCGAGTACACACCATCTCACTCAGCC GTCTCTAGGTCGTCTTTCTGTATGATAACCAGGAGTATAATATCTGGATT GAGACACGTGGTTTCAGCGATGGCGCACTGGAGGTAAGCTGGCTTGTCGC AGCATTCGTTGCTATTGGGTCCAGCGGTAACTGACGCGTGGCCTCCCGGT TATCATAGTACGGGCTTATCCCCATCATTCCTGGCGGAGACTACAGTAAT TCCTTCTTGGCCGTTAACGACCAGACCGGGCGGTTAGAAATTGTGAAGCA GTGGAGACAGGAAGCGAAATTTCGTTGTGTTGAGTAA
back to top

Coding sequence (CDS) from alignment at ch3:852315..852901+

>KYF_003222-T1 ID=KYF_003222-T1|Name=KYF_003222-T1|organism=Aspergillus niger KYF3|type=CDS|length=1560bp|location=Sequence derived from alignment at ch3:852315..852901+ (Aspergillus niger KYF3)
ATGCCAAGTCATGCCGGTCTCTTCACTGCCTTCACCGGCTGCGTTCTGGC
CATCGATAACGACAATCGCCTGACTCTCCACCCGAAAGACCATCAGCCTG
GCCTGAGGGATAAGCTCCGAGCTAATGGAGAGTTCTGGCTCTGTCGCGAT
GATGGACTGATTGGGAAGTTCGGAATCCCAGACAAGGTCGTCTTTCTGTA
TGATAACCAGGAGTATAATATCTGGATTGAGACACGTGGTTTCAGCGATG
GCGCACTGGAGTACGGGCTTATCCCCATCATTCCTGGCGGAGACTACAGT
AATTCCTTCTTGGCCGTTAACGACCAGACCGGGCGGTTAGAAATTGTGAA
GCAGTGGAGACAGGAAGCGAAATTTCGTTGTGTTGAGTAAATGCCAAGTC
ATGCCGGTCTCTTCACTGCCTTCACCGGCTGCGTTCTGGCCATCGATAAC
GACAATCGCCTGACTCTCCACCCGAAAGACCATCAGCCTGGCCTGAGGGA
TAAGCTCCGAGCTAATGGAGAGTTCTGGCTCTGTCGCGATGATGGACTGA
TTGGGAAGTTCGGAATCCCAGACAAGGTCGTCTTTCTGTATGATAACCAG
GAGTATAATATCTGGATTGAGACACGTGGTTTCAGCGATGGCGCACTGGA
GTACGGGCTTATCCCCATCATTCCTGGCGGAGACTACAGTAATTCCTTCT
TGGCCGTTAACGACCAGACCGGGCGGTTAGAAATTGTGAAGCAGTGGAGA
CAGGAAGCGAAATTTCGTTGTGTTGAGTAAATGCCAAGTCATGCCGGTCT
CTTCACTGCCTTCACCGGCTGCGTTCTGGCCATCGATAACGACAATCGCC
TGACTCTCCACCCGAAAGACCATCAGCCTGGCCTGAGGGATAAGCTCCGA
GCTAATGGAGAGTTCTGGCTCTGTCGCGATGATGGACTGATTGGGAAGTT
CGGAATCCCAGACAAGGTCGTCTTTCTGTATGATAACCAGGAGTATAATA
TCTGGATTGAGACACGTGGTTTCAGCGATGGCGCACTGGAGTACGGGCTT
ATCCCCATCATTCCTGGCGGAGACTACAGTAATTCCTTCTTGGCCGTTAA
CGACCAGACCGGGCGGTTAGAAATTGTGAAGCAGTGGAGACAGGAAGCGA
AATTTCGTTGTGTTGAGTAAATGCCAAGTCATGCCGGTCTCTTCACTGCC
TTCACCGGCTGCGTTCTGGCCATCGATAACGACAATCGCCTGACTCTCCA
CCCGAAAGACCATCAGCCTGGCCTGAGGGATAAGCTCCGAGCTAATGGAG
AGTTCTGGCTCTGTCGCGATGATGGACTGATTGGGAAGTTCGGAATCCCA
GACAAGGTCGTCTTTCTGTATGATAACCAGGAGTATAATATCTGGATTGA
GACACGTGGTTTCAGCGATGGCGCACTGGAGTACGGGCTTATCCCCATCA
TTCCTGGCGGAGACTACAGTAATTCCTTCTTGGCCGTTAACGACCAGACC
GGGCGGTTAGAAATTGTGAAGCAGTGGAGACAGGAAGCGAAATTTCGTTG
TGTTGAGTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_003222KYF_003222Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_003222-T1.exon1KYF_003222-T1.exon1Aspergillus niger KYF3exon
KYF_003222-T1.exon2KYF_003222-T1.exon2Aspergillus niger KYF3exon
KYF_003222-T1.exon3KYF_003222-T1.exon3Aspergillus niger KYF3exon
KYF_003222-T1.exon4KYF_003222-T1.exon4Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_003222-T1.cdsKYF_003222-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_003222-T1KYF_003222-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_3.4
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:852315..852901 +