You are here

Home

KYF_003231-T1, KYF_003231-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_003231-T1
Unique NameKYF_003231-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:873502..875211+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_003231-T1 ID=KYF_003231-T1|Name=KYF_003231-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1710bp|location=Sequence derived from alignment at ch3:873502..875211+ (Aspergillus niger KYF3)
ATGTCGACGACCTCCAAGCGTAAGCGTGCAAGGAAGGCCTGCATTCCATG
CCACCAGCGGAAACGGAAATGCGACAACCAATATCCTTGCAGCATGTGTA
CCACTTACGACTATAACTGCAGATACGACAAGGACCTGACAGGAACTGTG
GGAGAAAGCGTTGATGTCCCACCCCAAGCTAAGCGCATCAGCCTTGATGG
CAGAAGTCGTTTGACCAACCAGCCACACGTAGAGCAAGGCTCCCACGAAG
CCAATAGCTCATCGACAAAAAGTCCCGCCACTGTGACCAGCACATCACCT
GGAATCTTTGACGACAATAAGTGCAGATACACCGGGGCATCAGCGGCCAT
GACTTTTCCACATGTCCTGGGCGTTAGTCTCGGTGCTGACAGTCCTCCGC
GATTGCGGTCATGCGCCTACAACTTTGGCAACCGACCAGACGAGGCTTCA
AACACCCACAGCTTTCTCGGAGATCTGATCTCCGAGGAGGACGTCGGCTA
CTATGCGGGGGTTTATTTCGCTGTCATGAACCCGATCGGCGACATCTTGG
ACCCAAGAATATTCGCCGATCGATGTCACCAATATTACAACGGCGTTTCT
AGCACAGACATTGCATTTGCTGCTGTGGCTGCTGGCGTAGCCTGCCTCGG
GTCCTTTCTCTCATCCAACAGACATGCACGGGAGACTGACCTGGTGCGAT
ACGCTAAGGCGATTCTCGATGATCCATCGTCAATACGCACGCTAAATATT
GACCACATACTCGCATGGGACATGCGAGCATTCTACCTTCGCGCCACAAG
CCGCCCCAAGAATGCCTGGATTGCCTCCTGTACCGTCATGCACCTGTGTG
AAACAGTTGGGTTGCACGACGAAGCGAGTATCAAGAAGATGGCATCCAAG
GCCGGCTCTGCTGTTCTTGGGCTTGATGCCGACCGACTGAGGAGAATCTT
TTGGGTCTCTTGGGCTGGACACAATATGTTATCCTATGAGCAAGATTGTT
CTGCTGTAAACTTTCGCTATGTGACTTGTCAGTCTTTTGTAGCAACACCA
GGGTCCGTTGCCGACCAGTTCGTCCGATTAGTCCAACTTACCCCAGCCCC
GAACTCCCCGTTTCGTCTCAAATGGGAGCCTTCGAATCTGAGTGAGGAAC
TATTTGAACGTCTAAAAGCAGTGACTGAACTCCAGGTCAAACATCCATTT
TTGGTGGTGACCGCGGCAGACATCGCCTTTTGCTTTTATCGTCGCCTGTA
CCAGGCTCAGACGGGGATCTCAGATGATTTTATCAATCTCGTCATTGATT
GCGGTAACGCAGGGGTTGAGGCAGCCGAGAAGCTCGCTAACGAGGGTCAT
TTATTCTGGAACATCCTTGGCAGCGTCTTCCAATTTGCTTGTGTTCTGTT
GGCTATTGACAGGCCGATTGCCTCCGCTCACATCGGCACTGTCTTCAAGG
GTTTGGAGAACTTAGTCAAGGCGGCCGATACAACACTGACGCGCGAGGCA
TTATCAATAGCACGACATCTACTCAGCCTCAAGACGGCTAGAAAGCGCAA
GGAGCTGGCTGAGCTGGAAGCGATCGAGGCAGGCTATCAATTTGGTCTGA
CACCACCGGGACCAGAGGCCAGTGTCTCTGTGCCTGACATCAGCTGGGAT
CTATACTGGGATCAGTTCTTTATTGAGCCGTATCTGTCGATGCCTGGTGG
AGGTATCTAG
back to top

Coding sequence (CDS) from alignment at ch3:873502..875211+

>KYF_003231-T1 ID=KYF_003231-T1|Name=KYF_003231-T1|organism=Aspergillus niger KYF3|type=CDS|length=1710bp|location=Sequence derived from alignment at ch3:873502..875211+ (Aspergillus niger KYF3)
ATGTCGACGACCTCCAAGCGTAAGCGTGCAAGGAAGGCCTGCATTCCATG
CCACCAGCGGAAACGGAAATGCGACAACCAATATCCTTGCAGCATGTGTA
CCACTTACGACTATAACTGCAGATACGACAAGGACCTGACAGGAACTGTG
GGAGAAAGCGTTGATGTCCCACCCCAAGCTAAGCGCATCAGCCTTGATGG
CAGAAGTCGTTTGACCAACCAGCCACACGTAGAGCAAGGCTCCCACGAAG
CCAATAGCTCATCGACAAAAAGTCCCGCCACTGTGACCAGCACATCACCT
GGAATCTTTGACGACAATAAGTGCAGATACACCGGGGCATCAGCGGCCAT
GACTTTTCCACATGTCCTGGGCGTTAGTCTCGGTGCTGACAGTCCTCCGC
GATTGCGGTCATGCGCCTACAACTTTGGCAACCGACCAGACGAGGCTTCA
AACACCCACAGCTTTCTCGGAGATCTGATCTCCGAGGAGGACGTCGGCTA
CTATGCGGGGGTTTATTTCGCTGTCATGAACCCGATCGGCGACATCTTGG
ACCCAAGAATATTCGCCGATCGATGTCACCAATATTACAACGGCGTTTCT
AGCACAGACATTGCATTTGCTGCTGTGGCTGCTGGCGTAGCCTGCCTCGG
GTCCTTTCTCTCATCCAACAGACATGCACGGGAGACTGACCTGGTGCGAT
ACGCTAAGGCGATTCTCGATGATCCATCGTCAATACGCACGCTAAATATT
GACCACATACTCGCATGGGACATGCGAGCATTCTACCTTCGCGCCACAAG
CCGCCCCAAGAATGCCTGGATTGCCTCCTGTACCGTCATGCACCTGTGTG
AAACAGTTGGGTTGCACGACGAAGCGAGTATCAAGAAGATGGCATCCAAG
GCCGGCTCTGCTGTTCTTGGGCTTGATGCCGACCGACTGAGGAGAATCTT
TTGGGTCTCTTGGGCTGGACACAATATGTTATCCTATGAGCAAGATTGTT
CTGCTGTAAACTTTCGCTATGTGACTTGTCAGTCTTTTGTAGCAACACCA
GGGTCCGTTGCCGACCAGTTCGTCCGATTAGTCCAACTTACCCCAGCCCC
GAACTCCCCGTTTCGTCTCAAATGGGAGCCTTCGAATCTGAGTGAGGAAC
TATTTGAACGTCTAAAAGCAGTGACTGAACTCCAGGTCAAACATCCATTT
TTGGTGGTGACCGCGGCAGACATCGCCTTTTGCTTTTATCGTCGCCTGTA
CCAGGCTCAGACGGGGATCTCAGATGATTTTATCAATCTCGTCATTGATT
GCGGTAACGCAGGGGTTGAGGCAGCCGAGAAGCTCGCTAACGAGGGTCAT
TTATTCTGGAACATCCTTGGCAGCGTCTTCCAATTTGCTTGTGTTCTGTT
GGCTATTGACAGGCCGATTGCCTCCGCTCACATCGGCACTGTCTTCAAGG
GTTTGGAGAACTTAGTCAAGGCGGCCGATACAACACTGACGCGCGAGGCA
TTATCAATAGCACGACATCTACTCAGCCTCAAGACGGCTAGAAAGCGCAA
GGAGCTGGCTGAGCTGGAAGCGATCGAGGCAGGCTATCAATTTGGTCTGA
CACCACCGGGACCAGAGGCCAGTGTCTCTGTGCCTGACATCAGCTGGGAT
CTATACTGGGATCAGTTCTTTATTGAGCCGTATCTGTCGATGCCTGGTGG
AGGTATCTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_003231KYF_003231Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_003231-T1.exon1KYF_003231-T1.exon1Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_003231-T1.cdsKYF_003231-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_003231-T1KYF_003231-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_3.5
NoteEggNog:ENOG41
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR007219
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:873502..875211 +
Powered by Drupal