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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:884076..885428- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_003234-T1 ID=KYF_003234-T1|Name=KYF_003234-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1353bp|location=Sequence derived from alignment at ch3:884076..885428- (Aspergillus niger KYF3)
ATGACGCGCACTCAAAAAAAGATCACCCTTGCTGGAACCACACGACCACT
GGAGACCACAGTCGCACTCGTGGCACACTACTCGAAAGGCAGTTATTACA
TCTTTGAAAACAACGATACATAGTACATTGGGCTCGGCACCTATGTATCT
TTGATATTTGATGCACAAGGCCGAACAGCTACCAGGACAAGTAGTGACGG
CCAATCAGAATCTACGGCTATCACGGGCTCACCCACAGACCTGATTAGAG
ATTTTGTCTCCAAGTATTCCAGCCATGGGAAAATATTTGGCCATGTGGGA
TTTAACTATTCCGCACGGTGCTCCGGCCAAGCTTTCGAACCGGGTCAATG
GCCAATGTTGAGCCTCATAGTTCCTAGCGTGCAGGTTACTATTGACCGGA
GTAAGGTCACAGTCACGGGAGGTGACGATGAAGATATACGCCGAGCAACC
GAGCAGATCAAAAGAATGCTGGAAGCGGAGCTGGCCGAAGACATTGCCCT
GCCATCTCCTGTCCCAGGCAAGATAAACCTGAATGTGGATGCAAAGACAT
ATCAGACCCGCGTAGCTAATGCGATCGCGGATATTTCCGAAGCCAAATAT
ACCAAGGCAATCCCATCCAGGAAGGTACCTTTGGACTTTCGGGTTGATAT
GTTAGCAACACTTCTTCACGGCCGACGGGCCAACAATCCCGCGCGCACGT
TCTCCTTCAATCACAACGGCATCCAGGCGACTGGCTTCAGCCCCGAAGTA
CTTCTTAGCATCAACGGTGAGGATGCCTATACAGAAGCACTGGCCGGAAC
TCAACTGTCAAACTCCGCCAAAGCCAGCCTCGATCCGTTCGACAATAAAC
TCCACAATGATACCAAAGAGGTCGCCGAACACGTCATTGCTATCAAAGGC
TCTATCCGCCGGTTAAGTAAGCTATGCGAACCAGACTCAATTGCGATCAA
GGATTTCATGAAGGTTATGCCGAGAGGAAGCGTACAGCACCTACATTCTC
ATGTGTGCGGACACCTGAAGCCGGGATGCGATGGTTGGGATGCTCTGCCG
GGCCTCATAGCCAATATTACCGTGCCTGGATTACCAGGAGACGGCAACTC
GGATGCAATGAAGTCCTTCGAGCCAGACCCGAGGGATCTTTATTGTGGTG
CAGTGCTTATGTTGGATGACAGCTCAAAACTGTTTGATGCTACTCTGGTG
CTTCGCACAGTATTCCAGGATGAGACTCGGCAATGGTTGCAGGCTGGGGC
TGGTGTGACCATCAACTCCAACCCGGAACGCGAATATGCTGAAACATGTG
AGAAGCTGGGGAGTGTGGCACCCTTCGTAGTTCCAGCTTCTACTCAGGTT
TGA back to topCoding sequence (CDS) from alignment at ch3:884076..885428- >KYF_003234-T1 ID=KYF_003234-T1|Name=KYF_003234-T1|organism=Aspergillus niger KYF3|type=CDS|length=2598bp|location=Sequence derived from alignment at ch3:884076..885428- (Aspergillus niger KYF3)
TACATTGGGCTCGGCACCTATGTATCTTTGATATTTGATGCACAAGGCCG
AACAGCTACCAGGACAAGTAGTGACGGCCAATCAGAATCTACGGCTATCA
CGGGCTCACCCACAGACCTGATTAGAGATTTTGTCTCCAAGTATTCCAGC
CATGGGAAAATATTTGGCCATGTGGGATTTAACTATTCCGCACGGTGCTC
CGGCCAAGCTTTCGAACCGGGTCAATGGCCAATGTTGAGCCTCATAGTTC
CTAGCGTGCAGGTTACTATTGACCGGAGTAAGGTCACAGTCACGGGAGGT
GACGATGAAGATATACGCCGAGCAACCGAGCAGATCAAAAGAATGCTGGA
AGCGGAGCTGGCCGAAGACATTGCCCTGCCATCTCCTGTCCCAGGCAAGA
TAAACCTGAATGTGGATGCAAAGACATATCAGACCCGCGTAGCTAATGCG
ATCGCGGATATTTCCGAAGCCAAATATACCAAGGCAATCCCATCCAGGAA
GGTACCTTTGGACTTTCGGGTTGATATGTTAGCAACACTTCTTCACGGCC
GACGGGCCAACAATCCCGCGCGCACGTTCTCCTTCAATCACAACGGCATC
CAGGCGACTGGCTTCAGCCCCGAAGTACTTCTTAGCATCAACGGTGAGGA
TGCCTATACAGAAGCACTGGCCGGAACTCAACTGTCAAACTCCGCCAAAG
CCAGCCTCGATCCGTTCGACAATAAACTCCACAATGATACCAAAGAGGTC
GCCGAACACGTCATTGCTATCAAAGGCTCTATCCGCCGGTTAAGTAAGCT
ATGCGAACCAGACTCAATTGCGATCAAGGATTTCATGAAGGTTATGCCGA
GAGGAAGCGTACAGCACCTACATTCTCATGTGTGCGGACACCTGAAGCCG
GGATGCGATGGTTGGGATGCTCTGCCGGGCCTCATAGCCAATATTACCGT
GCCTGGATTACCAGGAGACGGCAACTCGGATGCAATGAAGTCCTTCGAGC
CAGACCCGAGGGATCTTTATTGTGGTGCAGTGCTTATGTTGGATGACAGC
TCAAAACTGTTTGATGCTACTCTGGTGCTTCGCACAGTATTCCAGGATGA
GACTCGGCAATGGTTGCAGGCTGGGGCTGGTGTGACCATCAACTCCAACC
CGGAACGCGAATATGCTGAAACATGTGAGAAGCTGGGGAGTGTGGCACCC
TTCGTAGTTCCAGCTTCTACTCAGGTTTGAATGACGCGCACTCAAAAAAA
GATCACCCTTGCTGGAACCACACGACCACTGGAGACCACAGTCGCACTCT
ACATTGGGCTCGGCACCTATGTATCTTTGATATTTGATGCACAAGGCCGA
ACAGCTACCAGGACAAGTAGTGACGGCCAATCAGAATCTACGGCTATCAC
GGGCTCACCCACAGACCTGATTAGAGATTTTGTCTCCAAGTATTCCAGCC
ATGGGAAAATATTTGGCCATGTGGGATTTAACTATTCCGCACGGTGCTCC
GGCCAAGCTTTCGAACCGGGTCAATGGCCAATGTTGAGCCTCATAGTTCC
TAGCGTGCAGGTTACTATTGACCGGAGTAAGGTCACAGTCACGGGAGGTG
ACGATGAAGATATACGCCGAGCAACCGAGCAGATCAAAAGAATGCTGGAA
GCGGAGCTGGCCGAAGACATTGCCCTGCCATCTCCTGTCCCAGGCAAGAT
AAACCTGAATGTGGATGCAAAGACATATCAGACCCGCGTAGCTAATGCGA
TCGCGGATATTTCCGAAGCCAAATATACCAAGGCAATCCCATCCAGGAAG
GTACCTTTGGACTTTCGGGTTGATATGTTAGCAACACTTCTTCACGGCCG
ACGGGCCAACAATCCCGCGCGCACGTTCTCCTTCAATCACAACGGCATCC
AGGCGACTGGCTTCAGCCCCGAAGTACTTCTTAGCATCAACGGTGAGGAT
GCCTATACAGAAGCACTGGCCGGAACTCAACTGTCAAACTCCGCCAAAGC
CAGCCTCGATCCGTTCGACAATAAACTCCACAATGATACCAAAGAGGTCG
CCGAACACGTCATTGCTATCAAAGGCTCTATCCGCCGGTTAAGTAAGCTA
TGCGAACCAGACTCAATTGCGATCAAGGATTTCATGAAGGTTATGCCGAG
AGGAAGCGTACAGCACCTACATTCTCATGTGTGCGGACACCTGAAGCCGG
GATGCGATGGTTGGGATGCTCTGCCGGGCCTCATAGCCAATATTACCGTG
CCTGGATTACCAGGAGACGGCAACTCGGATGCAATGAAGTCCTTCGAGCC
AGACCCGAGGGATCTTTATTGTGGTGCAGTGCTTATGTTGGATGACAGCT
CAAAACTGTTTGATGCTACTCTGGTGCTTCGCACAGTATTCCAGGATGAG
ACTCGGCAATGGTTGCAGGCTGGGGCTGGTGTGACCATCAACTCCAACCC
GGAACGCGAATATGCTGAAACATGTGAGAAGCTGGGGAGTGTGGCACCCT
TCGTAGTTCCAGCTTCTACTCAGGTTTGAATGACGCGCACTCAAAAAAAG
ATCACCCTTGCTGGAACCACACGACCACTGGAGACCACAGTCGCACTC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0009058 | biosynthetic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016833 | oxo-acid-lyase activity |
| GO:0008909 | isochorismate synthase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_3.5 |
| Note | SMCOG1018:isochorismate synthase |
| DBxref | InterPro:IPR005801 |
| DBxref | InterPro:IPR019996 |
| DBxref | InterPro:IPR015890 |
| DBxref | PFAM:PF00425 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:884076..885428 - |
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