You are here

Home

KYF_003266-T1, KYF_003266-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_003266-T1
Unique NameKYF_003266-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:969279..970850+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_003266-T1 ID=KYF_003266-T1|Name=KYF_003266-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1572bp|location=Sequence derived from alignment at ch3:969279..970850+ (Aspergillus niger KYF3)
ATGTCTCGACAACTTTTGCACCTTACTGGCAGTGCTTTACGCATGGCCCA
GGTTATCCTTATCGTTGCTCCCGCTTTTATCATCTTCGGCTACAACCAGG
CTGGGGCTGGTCCCCTTGCTACCCTCCAATCTTGGGTTAAGGTCTTTCCC
CAGATCGATACAATCAATACGACAGGTGCTCTAGAAGCGAAGAATTCTAC
TGGAAAGGGAGCTGTCATTGCGTCTTTCCAAATTGGTGCGCTGATAGGTG
CGCTGTCATGTACTGTCATCTCAGATCGTCTAGGGCGACGCAAGACTATT
TTCATCGGTTCTATTCTCACTATCATTGGTCAATTACTCCAAGTATCAGC
CTATTCTTTGATTCAATTTACTGTTGGCCGAATCATTCTGGGTATCGGTA
CCGGTCAATTCAGTGTTGCTGTCCCTGTTTGGCAATCTGAATGCTCTTCC
GCCAAGCATCGTGGTCAGCATGTCATCGCCGACGGTATTTTTATGTGTCT
GGGATATGCTCTGTGCAACTGGATCGACTTTGCTTTCAGTCGGCTATCTG
GTGAAAATACCGGCCAATGGCGTGGACCGCTGTCACTGTCCTTCCTGCCA
TCACTGGTGATCTTGGTCGCGGTCTTCTTACTTCCTGAGTCACCACGTTG
GTTGGTAAGAGTGAACCGTACCGAAGAGGCATCCGCTAGCCTTGCCGCAT
ACAAGGGCATGTCTCCGGAAGATGAAGCTATCAAGTCAGAAATTTCTGGT
ATTGAACTATCATTTGAGAATACCACCCAGTCAACAAGGGCGATCCGTGA
AATGTTCTCCAAAGATGATGACGAACGTTTATTCTATCGCTTCTGTCTCT
GCATCGTCTTGCAATTCTTCCAACAAATGTGTGGTGGAAACCTTATCTCA
GTCTACGCCTCTACCATCTTCGAACAAAATCTGGGCCTGAGCTCTAGTCT
TTCAAGAATCCTTGCAGCATCTGCCCTGACATGGAAGTTTGTATGCTGCT
TTATCTCCTTCTTTGCCATTGATCGACTAGGCCGGCGTGCAGTATTTATG
ATCAGCGGTACAGGCATGGCATTCTGCATGGCTGCATTGGCCATCACCAC
TAGCTTCGGGGTTGAAAACAGACAGGCGTCGATCGCATCCGTGGTGTTTA
TTTTCATGTTTAATCTCTTCTATCCCATTGGCTTCCTGGGTGGTAATTTC
CTGTACTGCACGGAAGTTGCGCCCCAGCGTCTTCGAGTCGCGATGTCAGC
TATCTCCACTGCCAACCACTGGTTGTGGAACTTTGTTGTTGTGATGATTA
CCCCGGTCGCTTTGGATACTATCGGCTACCGGTACTATATCATGTACGCG
ATCTTATCTGCCTGCATTCCGGTTCTGGTGTATTTCTTCTATCCGGAGAC
TATGAACCGGAACTTGGAGTTGATCAACCACGTCTTCCGGGATGCGTCGT
CGCCTTGGCAGATTGTCTCTATGGCGCGTCATCTTCCTCAGGGAGAAATT
ACCCCGGCAGAGCTGGTTGCCTATAACAAGGAGAAGGACGATTGCTCTGT
TGAGATGAGAGAACATGCATGA
back to top

Coding sequence (CDS) from alignment at ch3:969279..970850+

>KYF_003266-T1 ID=KYF_003266-T1|Name=KYF_003266-T1|organism=Aspergillus niger KYF3|type=CDS|length=1572bp|location=Sequence derived from alignment at ch3:969279..970850+ (Aspergillus niger KYF3)
ATGTCTCGACAACTTTTGCACCTTACTGGCAGTGCTTTACGCATGGCCCA
GGTTATCCTTATCGTTGCTCCCGCTTTTATCATCTTCGGCTACAACCAGG
CTGGGGCTGGTCCCCTTGCTACCCTCCAATCTTGGGTTAAGGTCTTTCCC
CAGATCGATACAATCAATACGACAGGTGCTCTAGAAGCGAAGAATTCTAC
TGGAAAGGGAGCTGTCATTGCGTCTTTCCAAATTGGTGCGCTGATAGGTG
CGCTGTCATGTACTGTCATCTCAGATCGTCTAGGGCGACGCAAGACTATT
TTCATCGGTTCTATTCTCACTATCATTGGTCAATTACTCCAAGTATCAGC
CTATTCTTTGATTCAATTTACTGTTGGCCGAATCATTCTGGGTATCGGTA
CCGGTCAATTCAGTGTTGCTGTCCCTGTTTGGCAATCTGAATGCTCTTCC
GCCAAGCATCGTGGTCAGCATGTCATCGCCGACGGTATTTTTATGTGTCT
GGGATATGCTCTGTGCAACTGGATCGACTTTGCTTTCAGTCGGCTATCTG
GTGAAAATACCGGCCAATGGCGTGGACCGCTGTCACTGTCCTTCCTGCCA
TCACTGGTGATCTTGGTCGCGGTCTTCTTACTTCCTGAGTCACCACGTTG
GTTGGTAAGAGTGAACCGTACCGAAGAGGCATCCGCTAGCCTTGCCGCAT
ACAAGGGCATGTCTCCGGAAGATGAAGCTATCAAGTCAGAAATTTCTGGT
ATTGAACTATCATTTGAGAATACCACCCAGTCAACAAGGGCGATCCGTGA
AATGTTCTCCAAAGATGATGACGAACGTTTATTCTATCGCTTCTGTCTCT
GCATCGTCTTGCAATTCTTCCAACAAATGTGTGGTGGAAACCTTATCTCA
GTCTACGCCTCTACCATCTTCGAACAAAATCTGGGCCTGAGCTCTAGTCT
TTCAAGAATCCTTGCAGCATCTGCCCTGACATGGAAGTTTGTATGCTGCT
TTATCTCCTTCTTTGCCATTGATCGACTAGGCCGGCGTGCAGTATTTATG
ATCAGCGGTACAGGCATGGCATTCTGCATGGCTGCATTGGCCATCACCAC
TAGCTTCGGGGTTGAAAACAGACAGGCGTCGATCGCATCCGTGGTGTTTA
TTTTCATGTTTAATCTCTTCTATCCCATTGGCTTCCTGGGTGGTAATTTC
CTGTACTGCACGGAAGTTGCGCCCCAGCGTCTTCGAGTCGCGATGTCAGC
TATCTCCACTGCCAACCACTGGTTGTGGAACTTTGTTGTTGTGATGATTA
CCCCGGTCGCTTTGGATACTATCGGCTACCGGTACTATATCATGTACGCG
ATCTTATCTGCCTGCATTCCGGTTCTGGTGTATTTCTTCTATCCGGAGAC
TATGAACCGGAACTTGGAGTTGATCAACCACGTCTTCCGGGATGCGTCGT
CGCCTTGGCAGATTGTCTCTATGGCGCGTCATCTTCCTCAGGGAGAAATT
ACCCCGGCAGAGCTGGTTGCCTATAACAAGGAGAAGGACGATTGCTCTGT
TGAGATGAGAGAACATGCATGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_003266KYF_003266Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_003266-T1.exon1KYF_003266-T1.exon1Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_003266-T1.cdsKYF_003266-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_003266-T1KYF_003266-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR005829
DBxrefInterPro:IPR005828
DBxrefInterPro:IPR003663
DBxrefPFAM:PF00083
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:969279..970850 +
Powered by Drupal