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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1434068..1435067+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_003433-T1 ID=KYF_003433-T1|Name=KYF_003433-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1000bp|location=Sequence derived from alignment at ch3:1434068..1435067+ (Aspergillus niger KYF3)
ATGAACAAAGAAGCATTGCTCTCCGTCACTGAGCGCGACTTCATCCTCAA
TGCGCTGCGCGAGGATGTACGACTGGACGGTCGCGGTTTCGACCAGCTAC
GTCCGCTGAATGTGTCATTCGGGGAGGAGTATGGACATGTGAAGGTGCAG
CTCGGCAAAACCAGGTAGGTAGACTCATCGTTCAGCTTGCTTCAACAACA
CTAACTGATTCTTTTCTGCTGCAGCCTCATTGTCCGTATCTCAGCTGAAG
TCACAAAACCTCACGATGATCGTCCGTTCGACGGTCTTTTCACAATCGCC
ATGGAGCTGACTGCCATGGGCTCCCCCGCTTGGGACAATGGCCGGTATGG
ATATTCTCATCAAGCCGCGAGCGAGCAATAACTCAGCTGACCATTTCTGC
TTCAGACAAGGAGACTTTGAAACATATGTCACCAATGTCCTCGACCGTGT
CGTTCGCCATTCCAACGCCCTGGACACCGAGTCCCTCTGTATCCTCAAGG
GTGTCAGCTGCTGGAGCATCCGCGCGGACGTCCACGTTACCGATTACGAT
GGCAATCTGATTGATGCGGCTTGTATTGGTATCATGGCTGGATTGCAGCA
TTTCCGCCGTCAAGACGCTGTAGTCAAGGATGGCCAGGTGATTGTGTACA
GACTCGATGAACGAGTTCCTGTCGCATTGAACATTACACATAAGCCGCTG
TCTGTTACTTTCCACACATTCGATGAAGGAAAACGGGTCATCATTGATGC
AACTCGGAAGGAGGAGCAAGCAGCGGAAGCTGACGTCGTGATTGGCATCA
ACAACGCTGGTGATGTGTGCTTCGTCTCCAAGTTCTCCGGATCGCCAGTG
GACGCGATGGTCTTTGTGGATAAGACTTCCGTTGCCCTGGAGAAGGTCAA
GGAGATCAATGCAATCATTGATAAGGCGTTACAAGCCGATCTCTCGAAAC
GAGCGAAGATTGGCATGGCTGAGGAGTCGCGGGCGGAAAACGATCGGTGA
back to topCoding sequence (CDS) from alignment at ch3:1434068..1435067+ >KYF_003433-T1 ID=KYF_003433-T1|Name=KYF_003433-T1|organism=Aspergillus niger KYF3|type=CDS|length=2637bp|location=Sequence derived from alignment at ch3:1434068..1435067+ (Aspergillus niger KYF3)
ATGAACAAAGAAGCATTGCTCTCCGTCACTGAGCGCGACTTCATCCTCAA
TGCGCTGCGCGAGGATGTACGACTGGACGGTCGCGGTTTCGACCAGCTAC
GTCCGCTGAATGTGTCATTCGGGGAGGAGTATGGACATGTGAAGGTGCAG
CTCGGCAAAACCAGCCTCATTGTCCGTATCTCAGCTGAAGTCACAAAACC
TCACGATGATCGTCCGTTCGACGGTCTTTTCACAATCGCCATGGAGCTGA
CTGCCATGGGCTCCCCCGCTTGGGACAATGGCCGACAAGGAGACTTTGAA
ACATATGTCACCAATGTCCTCGACCGTGTCGTTCGCCATTCCAACGCCCT
GGACACCGAGTCCCTCTGTATCCTCAAGGGTGTCAGCTGCTGGAGCATCC
GCGCGGACGTCCACGTTACCGATTACGATGGCAATCTGATTGATGCGGCT
TGTATTGGTATCATGGCTGGATTGCAGCATTTCCGCCGTCAAGACGCTGT
AGTCAAGGATGGCCAGGTGATTGTGTACAGACTCGATGAACGAGTTCCTG
TCGCATTGAACATTACACATAAGCCGCTGTCTGTTACTTTCCACACATTC
GATGAAGGAAAACGGGTCATCATTGATGCAACTCGGAAGGAGGAGCAAGC
AGCGGAAGCTGACGTCGTGATTGGCATCAACAACGCTGGTGATGTGTGCT
TCGTCTCCAAGTTCTCCGGATCGCCAGTGGACGCGATGGTCTTTGTGGAT
AAGACTTCCGTTGCCCTGGAGAAGGTCAAGGAGATCAATGCAATCATTGA
TAAGGCGTTACAAGCCGATCTCTCGAAACGAGCGAAGATTGGCATGGCTG
AGGAGTCGCGGGCGGAAAACGATCGGTGAATGAACAAAGAAGCATTGCTC
TCCGTCACTGAGCGCGACTTCATCCTCAATGCGCTGCGCGAGGATGTACG
ACTGGACGGTCGCGGTTTCGACCAGCTACGTCCGCTGAATGTGTCATTCG
GGGAGGAGTATGGACATGTGAAGGTGCAGCTCGGCAAAACCAGCCTCATT
GTCCGTATCTCAGCTGAAGTCACAAAACCTCACGATGATCGTCCGTTCGA
CGGTCTTTTCACAATCGCCATGGAGCTGACTGCCATGGGCTCCCCCGCTT
GGGACAATGGCCGACAAGGAGACTTTGAAACATATGTCACCAATGTCCTC
GACCGTGTCGTTCGCCATTCCAACGCCCTGGACACCGAGTCCCTCTGTAT
CCTCAAGGGTGTCAGCTGCTGGAGCATCCGCGCGGACGTCCACGTTACCG
ATTACGATGGCAATCTGATTGATGCGGCTTGTATTGGTATCATGGCTGGA
TTGCAGCATTTCCGCCGTCAAGACGCTGTAGTCAAGGATGGCCAGGTGAT
TGTGTACAGACTCGATGAACGAGTTCCTGTCGCATTGAACATTACACATA
AGCCGCTGTCTGTTACTTTCCACACATTCGATGAAGGAAAACGGGTCATC
ATTGATGCAACTCGGAAGGAGGAGCAAGCAGCGGAAGCTGACGTCGTGAT
TGGCATCAACAACGCTGGTGATGTGTGCTTCGTCTCCAAGTTCTCCGGAT
CGCCAGTGGACGCGATGGTCTTTGTGGATAAGACTTCCGTTGCCCTGGAG
AAGGTCAAGGAGATCAATGCAATCATTGATAAGGCGTTACAAGCCGATCT
CTCGAAACGAGCGAAGATTGGCATGGCTGAGGAGTCGCGGGCGGAAAACG
ATCGGTGAATGAACAAAGAAGCATTGCTCTCCGTCACTGAGCGCGACTTC
ATCCTCAATGCGCTGCGCGAGGATGTACGACTGGACGGTCGCGGTTTCGA
CCAGCTACGTCCGCTGAATGTGTCATTCGGGGAGGAGTATGGACATGTGA
AGGTGCAGCTCGGCAAAACCAGCCTCATTGTCCGTATCTCAGCTGAAGTC
ACAAAACCTCACGATGATCGTCCGTTCGACGGTCTTTTCACAATCGCCAT
GGAGCTGACTGCCATGGGCTCCCCCGCTTGGGACAATGGCCGACAAGGAG
ACTTTGAAACATATGTCACCAATGTCCTCGACCGTGTCGTTCGCCATTCC
AACGCCCTGGACACCGAGTCCCTCTGTATCCTCAAGGGTGTCAGCTGCTG
GAGCATCCGCGCGGACGTCCACGTTACCGATTACGATGGCAATCTGATTG
ATGCGGCTTGTATTGGTATCATGGCTGGATTGCAGCATTTCCGCCGTCAA
GACGCTGTAGTCAAGGATGGCCAGGTGATTGTGTACAGACTCGATGAACG
AGTTCCTGTCGCATTGAACATTACACATAAGCCGCTGTCTGTTACTTTCC
ACACATTCGATGAAGGAAAACGGGTCATCATTGATGCAACTCGGAAGGAG
GAGCAAGCAGCGGAAGCTGACGTCGTGATTGGCATCAACAACGCTGGTGA
TGTGTGCTTCGTCTCCAAGTTCTCCGGATCGCCAGTGGACGCGATGGTCT
TTGTGGATAAGACTTCCGTTGCCCTGGAGAAGGTCAAGGAGATCAATGCA
ATCATTGATAAGGCGTTACAAGCCGATCTCTCGAAACGAGCGAAGATTGG
CATGGCTGAGGAGTCGCGGGCGGAAAACGATCGGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0000178 | exosome (RNase complex) |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006396 | RNA processing |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264398 |
| DBxref | InterPro:IPR036345 |
| DBxref | InterPro:IPR020568 |
| DBxref | InterPro:IPR033100 |
| DBxref | InterPro:IPR015847 |
| DBxref | InterPro:IPR001247 |
| DBxref | InterPro:IPR027408 |
| DBxref | PFAM:PF03725 |
| DBxref | PFAM:PF01138 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1434068..1435067 + |
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