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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1589962..1590659+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_003493-T1 ID=KYF_003493-T1|Name=KYF_003493-T1|organism=Aspergillus niger KYF3|type=mRNA|length=698bp|location=Sequence derived from alignment at ch3:1589962..1590659+ (Aspergillus niger KYF3)
ATGTCTGCCAGCCCATCCCCCTCTGCCGGTGGCGATAGCAAGCCCACCGA
TCAAATTCACTTCCGATTCTGTCGTGAATGGTAAGTTTTGATCTCTACAC
TTTGGTCGGACCTTCTGCTAACGTCTACAGTTCCAACTTGCTCTACCCGA
AGGAAGACCGCATCAACAACCGGTTGATGTTCACCTGCCGAACCTGCCAT
GTCGGCGAGCCCGCCACCTCCTACTGCGTCTATCAAAACAAACTCAACAC
TCAAGTCGGAGATACCGCCGGTGTGACCCAGGATGTGGGATCTGATCCTA
CGGTTTGTCTCCCGGGTTTCTGTGATCATTGTGGGGAAGAGATTACCTGC
TTCGTCTGTGACATATCCTCCGAGGACTCCTGGTCCGAAGAGGATTATGA
TGGCTTTTCGTCGTCATGAGGTCCTGCGAGCGCCGCGCTCGCGTCATGGA
TACATTCCAAGTTGTCTTGAAATTTCCGTGGCTAACCCACTCTTTCCCTA
GCTTCCTCGTTCCAACAAGCTCTGCCCGAGCTGCGGCGAAGCCGAAGCAG
TCTTCTTCCAGTCGCAACAGCGTTCCGCTGAAACGGGAATGGTAAGCCTT
CATGCCGGTTTACACCGCATCCATGAAGGGATCGGCTGACGCTTACTTTC
CAGAAACTTTACTACGTCTGTTGCGCGTGCGGCAATGTTTTCGTCTAA back to topCoding sequence (CDS) from alignment at ch3:1589962..1590659+ >KYF_003493-T1 ID=KYF_003493-T1|Name=KYF_003493-T1|organism=Aspergillus niger KYF3|type=CDS|length=1548bp|location=Sequence derived from alignment at ch3:1589962..1590659+ (Aspergillus niger KYF3)
ATGTCTGCCAGCCCATCCCCCTCTGCCGGTGGCGATAGCAAGCCCACCGA
TCAAATTCACTTCCGATTCTGTCGTGAATGTTCCAACTTGCTCTACCCGA
AGGAAGACCGCATCAACAACCGGTTGATGTTCACCTGCCGAACCTGCCAT
GTCGGCGAGCCCGCCACCTCCTACTGCGTCTATCAAAACAAACTCAACAC
TCAAGTCGGAGATACCGCCGGTGTGACCCAGGATGTGGGATCTGATCCTA
CGCTTCCTCGTTCCAACAAGCTCTGCCCGAGCTGCGGCGAAGCCGAAGCA
GTCTTCTTCCAGTCGCAACAGCGTTCCGCTGAAACGGGAATGAAACTTTA
CTACGTCTGTTGCGCGTGCGGCAATGTTTTCGTCTAAATGTCTGCCAGCC
CATCCCCCTCTGCCGGTGGCGATAGCAAGCCCACCGATCAAATTCACTTC
CGATTCTGTCGTGAATGTTCCAACTTGCTCTACCCGAAGGAAGACCGCAT
CAACAACCGGTTGATGTTCACCTGCCGAACCTGCCATGTCGGCGAGCCCG
CCACCTCCTACTGCGTCTATCAAAACAAACTCAACACTCAAGTCGGAGAT
ACCGCCGGTGTGACCCAGGATGTGGGATCTGATCCTACGCTTCCTCGTTC
CAACAAGCTCTGCCCGAGCTGCGGCGAAGCCGAAGCAGTCTTCTTCCAGT
CGCAACAGCGTTCCGCTGAAACGGGAATGAAACTTTACTACGTCTGTTGC
GCGTGCGGCAATGTTTTCGTCTAAATGTCTGCCAGCCCATCCCCCTCTGC
CGGTGGCGATAGCAAGCCCACCGATCAAATTCACTTCCGATTCTGTCGTG
AATGTTCCAACTTGCTCTACCCGAAGGAAGACCGCATCAACAACCGGTTG
ATGTTCACCTGCCGAACCTGCCATGTCGGCGAGCCCGCCACCTCCTACTG
CGTCTATCAAAACAAACTCAACACTCAAGTCGGAGATACCGCCGGTGTGA
CCCAGGATGTGGGATCTGATCCTACGCTTCCTCGTTCCAACAAGCTCTGC
CCGAGCTGCGGCGAAGCCGAAGCAGTCTTCTTCCAGTCGCAACAGCGTTC
CGCTGAAACGGGAATGAAACTTTACTACGTCTGTTGCGCGTGCGGCAATG
TTTTCGTCTAAATGTCTGCCAGCCCATCCCCCTCTGCCGGTGGCGATAGC
AAGCCCACCGATCAAATTCACTTCCGATTCTGTCGTGAATGTTCCAACTT
GCTCTACCCGAAGGAAGACCGCATCAACAACCGGTTGATGTTCACCTGCC
GAACCTGCCATGTCGGCGAGCCCGCCACCTCCTACTGCGTCTATCAAAAC
AAACTCAACACTCAAGTCGGAGATACCGCCGGTGTGACCCAGGATGTGGG
ATCTGATCCTACGCTTCCTCGTTCCAACAAGCTCTGCCCGAGCTGCGGCG
AAGCCGAAGCAGTCTTCTTCCAGTCGCAACAGCGTTCCGCTGAAACGGGA
ATGAAACTTTACTACGTCTGTTGCGCGTGCGGCAATGTTTTCGTCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0003676 | nucleic acid binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006379 | mRNA cleavage |
| GO:0006351 | transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092654O3 |
| DBxref | InterPro:IPR034012 |
| DBxref | InterPro:IPR012164 |
| DBxref | InterPro:IPR001222 |
| DBxref | InterPro:IPR001529 |
| DBxref | PFAM:PF01096 |
| DBxref | PFAM:PF02150 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1589962..1590659 + |
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