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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1694907..1695968+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_003530-T1 ID=KYF_003530-T1|Name=KYF_003530-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1062bp|location=Sequence derived from alignment at ch3:1694907..1695968+ (Aspergillus niger KYF3)
ATGACGTCTTACGGGTTACTGGATCAACCAGACGAAGGTTGGTTCTAGAA
ACACGCCCCCGGTCCCTGTCACCATGCTAATGCCCTTCCAGATGGTCTCC
ACAAGTCGCGCCTTTTGAACGTCGAAGAAAAGCCTTTCAAGCGGATTTCA
AAACGCCTCCTCAACAACGATTCAACCGTAGTGTCCAACGCGACGCTCCC
TCCCACCCCTCCACCAGATGGTGCAGACGATGATGCAACAGCAGCTGCAG
AGGCGGAGAAACAGAGACGGCTCGAGGAATGGCGCCATTTCCGTGAAGAT
ATTGCTTTGGATTTTTCCGCATTTGAAGGCAGTATCGCGCGCATCCAGTT
CCTCTTGACGAGTAACGAGAAGGAGCGCGAGCGCTATGCGACAGAGAAGC
TTCGAATCCTTGATACAATGCAGTCGGTGCGTGACAATACCGCAGAGCTG
CGGGTACAGCTCGAGGAGGCCCAGCGTCTACTAGCACTGCGCAAAAGCTA
CGATGAATTGGCAGAGAAGATTACCAGCAACCGACTCTTGAAGCCGCGCG
AAGATCAACAGGCCAATCTACAAAAGCTACAGGCGGAAATAACGGAGCTG
GAGAAAGAGAGTAAAGAATACGCACACACCTGGTCGGAACGGCGAGAACA
GTTCGGTCGCATTGTTGAAGAAGGAATGCAACTTCGTCGGCTCATTCGTG
ACGAGAAGGAGGAGGTCGAGCGCAGAGAGGGCATGCAAGAGGAAGAAGAT
GGAGATGACGGGGATGTTCCCTCCAAGGGGAAATCCAGTGGAGCTAATAC
CCCTCGTCACGAGTCAGACAGTCTGACTCCTTCTCAACATGGCCATGATG
ATCTTGGACGATCACCAGCGGGCTTGCAAGTGGAAAAGACGGGTACTGCC
GGTGCGGTGTCACCCTTGCGACAGATGACTGCGGTGGACGACGAAAATAA
GACTACCCCCGATCAGGACACCTCAATGGAAGATGAAGGCGAGGTCCCCG
AAGAGCTAGAAGAAGGGGAGGAAGTCCAGGATGACCGTGCAGACAAAATG
GACACTACTTGA back to topCoding sequence (CDS) from alignment at ch3:1694907..1695968+ >KYF_003530-T1 ID=KYF_003530-T1|Name=KYF_003530-T1|organism=Aspergillus niger KYF3|type=CDS|length=2016bp|location=Sequence derived from alignment at ch3:1694907..1695968+ (Aspergillus niger KYF3)
ATGACGTCTTACGGGTTACTGGATCAACCAGACGAAGATGGTCTCCACAA
GTCGCGCCTTTTGAACGTCGAAGAAAAGCCTTTCAAGCGGATTTCAAAAC
GCCTCCTCAACAACGATTCAACCGTAGTGTCCAACGCGACGCTCCCTCCC
ACCCCTCCACCAGATGGTGCAGACGATGATGCAACAGCAGCTGCAGAGGC
GGAGAAACAGAGACGGCTCGAGGAATGGCGCCATTTCCGTGAAGATATTG
CTTTGGATTTTTCCGCATTTGAAGGCAGTATCGCGCGCATCCAGTTCCTC
TTGACGAGTAACGAGAAGGAGCGCGAGCGCTATGCGACAGAGAAGCTTCG
AATCCTTGATACAATGCAGTCGGTGCGTGACAATACCGCAGAGCTGCGGG
TACAGCTCGAGGAGGCCCAGCGTCTACTAGCACTGCGCAAAAGCTACGAT
GAATTGGCAGAGAAGATTACCAGCAACCGACTCTTGAAGCCGCGCGAAGA
TCAACAGGCCAATCTACAAAAGCTACAGGCGGAAATAACGGAGCTGGAGA
AAGAGAGTAAAGAATACGCACACACCTGGTCGGAACGGCGAGAACAGTTC
GGTCGCATTGTTGAAGAAGGAATGCAACTTCGTCGGCTCATTCGTGACGA
GAAGGAGGAGGTCGAGCGCAGAGAGGGCATGCAAGAGGAAGAAGATGGAG
ATGACGGGGATGTTCCCTCCAAGGGGAAATCCAGTGGAGCTAATACCCCT
CGTCACGAGTCAGACAGTCTGACTCCTTCTCAACATGGCCATGATGATCT
TGGACGATCACCAGCGGGCTTGCAAGTGGAAAAGACGGGTACTGCCGGTG
CGGTGTCACCCTTGCGACAGATGACTGCGGTGGACGACGAAAATAAGACT
ACCCCCGATCAGGACACCTCAATGGAAGATGAAGGCGAGGTCCCCGAAGA
GCTAGAAGAAGGGGAGGAAGTCCAGGATGACCGTGCAGACAAAATGGACA
CTACTTGAATGACGTCTTACGGGTTACTGGATCAACCAGACGAAGATGGT
CTCCACAAGTCGCGCCTTTTGAACGTCGAAGAAAAGCCTTTCAAGCGGAT
TTCAAAACGCCTCCTCAACAACGATTCAACCGTAGTGTCCAACGCGACGC
TCCCTCCCACCCCTCCACCAGATGGTGCAGACGATGATGCAACAGCAGCT
GCAGAGGCGGAGAAACAGAGACGGCTCGAGGAATGGCGCCATTTCCGTGA
AGATATTGCTTTGGATTTTTCCGCATTTGAAGGCAGTATCGCGCGCATCC
AGTTCCTCTTGACGAGTAACGAGAAGGAGCGCGAGCGCTATGCGACAGAG
AAGCTTCGAATCCTTGATACAATGCAGTCGGTGCGTGACAATACCGCAGA
GCTGCGGGTACAGCTCGAGGAGGCCCAGCGTCTACTAGCACTGCGCAAAA
GCTACGATGAATTGGCAGAGAAGATTACCAGCAACCGACTCTTGAAGCCG
CGCGAAGATCAACAGGCCAATCTACAAAAGCTACAGGCGGAAATAACGGA
GCTGGAGAAAGAGAGTAAAGAATACGCACACACCTGGTCGGAACGGCGAG
AACAGTTCGGTCGCATTGTTGAAGAAGGAATGCAACTTCGTCGGCTCATT
CGTGACGAGAAGGAGGAGGTCGAGCGCAGAGAGGGCATGCAAGAGGAAGA
AGATGGAGATGACGGGGATGTTCCCTCCAAGGGGAAATCCAGTGGAGCTA
ATACCCCTCGTCACGAGTCAGACAGTCTGACTCCTTCTCAACATGGCCAT
GATGATCTTGGACGATCACCAGCGGGCTTGCAAGTGGAAAAGACGGGTAC
TGCCGGTGCGGTGTCACCCTTGCGACAGATGACTGCGGTGGACGACGAAA
ATAAGACTACCCCCGATCAGGACACCTCAATGGAAGATGAAGGCGAGGTC
CCCGAAGAGCTAGAAGAAGGGGAGGAAGTCCAGGATGACCGTGCAGACAA
AATGGACACTACTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0000445 | THO complex part of transcription export complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006397 | mRNA processing |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR008501 |
| DBxref | PFAM:PF05615 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1694907..1695968 + |
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