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KYF_003533-T1, KYF_003533-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_003533-T1
Unique NameKYF_003533-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:1700321..1701542+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_003533-T1 ID=KYF_003533-T1|Name=KYF_003533-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1222bp|location=Sequence derived from alignment at ch3:1700321..1701542+ (Aspergillus niger KYF3)
ATGCCGCCACCATCACTTCTGCAGCTCTGCACGGCGACTGCGATTAGGAA
CGTGAAACGTATGCAGAGCCCAATCCCACCTTGACAAGAGCCCATCGGTA
AACTGATACTAAGTGCTCGTGCAGAATTAAATGATATTGGCAACATTCCC
TATGTACTCGCTCGTCCATTTCTACTGAAAGTGGAGAGTCCTGAGAAACT
GGTGAGTCTGCAGCGGAACCCCCCCGTCCTTCGTCAGTAACCCTTTGGCT
AACAGTCAAACTCACCCCACAACACAGAGAACTCTGGAATTACAGTCCCC
ACATTTGATGCGAGATGACGAGGAACTCTGGCTGGAGTTCATCAAAAGAG
ATATCCCGCGATGGGACGAATACGATCTGCCTGAGAAACCCGATTGTTGG
TATGACGTATATTGTGACCTCCGGGAACAAGTCCAACGGGCAGTGGAAGA
GGATGCTGAAAAGCTGAAGATGGCTTTAGATGGCATCAGCTCGGAGCGCC
AGGAAAAAAGTGCCAAATTCGTTACCGATCGTCGAATCATCGGTCTCCCC
CGAGAGAGGCCGACCGCGAGGCAACGATATGCTTCGTACGATCGGAGACT
GGGCGGCTCGCCGACGTCGTCATCTTCCATGACCCCCTGGGCTTTTGGTA
GGCCAAGAGAAACAAAGAAAAAGAACAGCATATTTACAGCAACAAAGAGG
AATAATGTTCTTACTGTGCCAACAAAGCACCTTAATAACAGAGCTTCCCA
GGTCAGACAGGCTCCGCGGTCTCTGATCGAGGACCATATACGTCCTGCTG
AGCCCCCTGTCGCTCGACGAAAGGAGGCTCCAGCTCTGAGAGCGCCCGGT
CGGTCACGGCCCCAGATGAGTGCTCCCTCCACAAGCCAGAATAGTCTGGA
AGTTGGTCCCAGCTTGCGGGAAAGAGAGGCTCGTTTACGAGCAATAACCC
AATCGCATAGCCCTGCTGCAGCCAGTAAGCCTATGGCAGGGAGAAATGCA
CAGACATCGCTGCCAACAAGAGGTCCATCCGGATCTCTATCAGGGGTAGC
GGCCAAGAAACAGACATCCCATCCGCTCAGTAACAGTGCGACTGGCTCTC
ATCGGGGGTCTGCCGTAGAGGACATGCCAGCGTCTCCGCCACAACCACCC
CGTCCGGCAGTTGTCCGCAAACGTCCTGCCCCGAACCTCTTTATCCAACC
AAAGAAGAAGAAACTGAACTGA
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Coding sequence (CDS) from alignment at ch3:1700321..1701542+

>KYF_003533-T1 ID=KYF_003533-T1|Name=KYF_003533-T1|organism=Aspergillus niger KYF3|type=CDS|length=3240bp|location=Sequence derived from alignment at ch3:1700321..1701542+ (Aspergillus niger KYF3)
ATGCCGCCACCATCACTTCTGCAGCTCTGCACGGCGACTGCGATTAGGAA
CGTGAAACAATTAAATGATATTGGCAACATTCCCTATGTACTCGCTCGTC
CATTTCTACTGAAAGTGGAGAGTCCTGAGAAACTGAGAACTCTGGAATTA
CAGTCCCCACATTTGATGCGAGATGACGAGGAACTCTGGCTGGAGTTCAT
CAAAAGAGATATCCCGCGATGGGACGAATACGATCTGCCTGAGAAACCCG
ATTGTTGGTATGACGTATATTGTGACCTCCGGGAACAAGTCCAACGGGCA
GTGGAAGAGGATGCTGAAAAGCTGAAGATGGCTTTAGATGGCATCAGCTC
GGAGCGCCAGGAAAAAAGTGCCAAATTCGTTACCGATCGTCGAATCATCG
GTCTCCCCCGAGAGAGGCCGACCGCGAGGCAACGATATGCTTCGTACGAT
CGGAGACTGGGCGGCTCGCCGACGTCGTCATCTTCCATGACCCCCTGGGC
TTTTGGTAGGCCAAGAGAAACAAAGAAAAAGAACAGCATATTTACAGCAA
CAAAGAGGAATAATGTTCTTACTGTGCCAACAAAGCACCTTAATAACAGA
GCTTCCCAGGTCAGACAGGCTCCGCGGTCTCTGATCGAGGACCATATACG
TCCTGCTGAGCCCCCTGTCGCTCGACGAAAGGAGGCTCCAGCTCTGAGAG
CGCCCGGTCGGTCACGGCCCCAGATGAGTGCTCCCTCCACAAGCCAGAAT
AGTCTGGAAGTTGGTCCCAGCTTGCGGGAAAGAGAGGCTCGTTTACGAGC
AATAACCCAATCGCATAGCCCTGCTGCAGCCAGTAAGCCTATGGCAGGGA
GAAATGCACAGACATCGCTGCCAACAAGAGGTCCATCCGGATCTCTATCA
GGGGTAGCGGCCAAGAAACAGACATCCCATCCGCTCAGTAACAGTGCGAC
TGGCTCTCATCGGGGGTCTGCCGTAGAGGACATGCCAGCGTCTCCGCCAC
AACCACCCCGTCCGGCAGTTGTCCGCAAACGTCCTGCCCCGAACCTCTTT
ATCCAACCAAAGAAGAAGAAACTGAACTGAATGCCGCCACCATCACTTCT
GCAGCTCTGCACGGCGACTGCGATTAGGAACGTGAAACAATTAAATGATA
TTGGCAACATTCCCTATGTACTCGCTCGTCCATTTCTACTGAAAGTGGAG
AGTCCTGAGAAACTGAGAACTCTGGAATTACAGTCCCCACATTTGATGCG
AGATGACGAGGAACTCTGGCTGGAGTTCATCAAAAGAGATATCCCGCGAT
GGGACGAATACGATCTGCCTGAGAAACCCGATTGTTGGTATGACGTATAT
TGTGACCTCCGGGAACAAGTCCAACGGGCAGTGGAAGAGGATGCTGAAAA
GCTGAAGATGGCTTTAGATGGCATCAGCTCGGAGCGCCAGGAAAAAAGTG
CCAAATTCGTTACCGATCGTCGAATCATCGGTCTCCCCCGAGAGAGGCCG
ACCGCGAGGCAACGATATGCTTCGTACGATCGGAGACTGGGCGGCTCGCC
GACGTCGTCATCTTCCATGACCCCCTGGGCTTTTGGTAGGCCAAGAGAAA
CAAAGAAAAAGAACAGCATATTTACAGCAACAAAGAGGAATAATGTTCTT
ACTGTGCCAACAAAGCACCTTAATAACAGAGCTTCCCAGGTCAGACAGGC
TCCGCGGTCTCTGATCGAGGACCATATACGTCCTGCTGAGCCCCCTGTCG
CTCGACGAAAGGAGGCTCCAGCTCTGAGAGCGCCCGGTCGGTCACGGCCC
CAGATGAGTGCTCCCTCCACAAGCCAGAATAGTCTGGAAGTTGGTCCCAG
CTTGCGGGAAAGAGAGGCTCGTTTACGAGCAATAACCCAATCGCATAGCC
CTGCTGCAGCCAGTAAGCCTATGGCAGGGAGAAATGCACAGACATCGCTG
CCAACAAGAGGTCCATCCGGATCTCTATCAGGGGTAGCGGCCAAGAAACA
GACATCCCATCCGCTCAGTAACAGTGCGACTGGCTCTCATCGGGGGTCTG
CCGTAGAGGACATGCCAGCGTCTCCGCCACAACCACCCCGTCCGGCAGTT
GTCCGCAAACGTCCTGCCCCGAACCTCTTTATCCAACCAAAGAAGAAGAA
ACTGAACTGAATGCCGCCACCATCACTTCTGCAGCTCTGCACGGCGACTG
CGATTAGGAACGTGAAACAATTAAATGATATTGGCAACATTCCCTATGTA
CTCGCTCGTCCATTTCTACTGAAAGTGGAGAGTCCTGAGAAACTGAGAAC
TCTGGAATTACAGTCCCCACATTTGATGCGAGATGACGAGGAACTCTGGC
TGGAGTTCATCAAAAGAGATATCCCGCGATGGGACGAATACGATCTGCCT
GAGAAACCCGATTGTTGGTATGACGTATATTGTGACCTCCGGGAACAAGT
CCAACGGGCAGTGGAAGAGGATGCTGAAAAGCTGAAGATGGCTTTAGATG
GCATCAGCTCGGAGCGCCAGGAAAAAAGTGCCAAATTCGTTACCGATCGT
CGAATCATCGGTCTCCCCCGAGAGAGGCCGACCGCGAGGCAACGATATGC
TTCGTACGATCGGAGACTGGGCGGCTCGCCGACGTCGTCATCTTCCATGA
CCCCCTGGGCTTTTGGTAGGCCAAGAGAAACAAAGAAAAAGAACAGCATA
TTTACAGCAACAAAGAGGAATAATGTTCTTACTGTGCCAACAAAGCACCT
TAATAACAGAGCTTCCCAGGTCAGACAGGCTCCGCGGTCTCTGATCGAGG
ACCATATACGTCCTGCTGAGCCCCCTGTCGCTCGACGAAAGGAGGCTCCA
GCTCTGAGAGCGCCCGGTCGGTCACGGCCCCAGATGAGTGCTCCCTCCAC
AAGCCAGAATAGTCTGGAAGTTGGTCCCAGCTTGCGGGAAAGAGAGGCTC
GTTTACGAGCAATAACCCAATCGCATAGCCCTGCTGCAGCCAGTAAGCCT
ATGGCAGGGAGAAATGCACAGACATCGCTGCCAACAAGAGGTCCATCCGG
ATCTCTATCAGGGGTAGCGGCCAAGAAACAGACATCCCATCCGCTCAGTA
ACAGTGCGACTGGCTCTCATCGGGGGTCTGCCGTAGAGGACATGCCAGCG
TCTCCGCCACAACCACCCCGTCCGGCAGTTGTCCGCAAACGTCCTGCCCC
GAACCTCTTTATCCAACCAAAGAAGAAGAAACTGAACTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0070449elongin complex
Vocabulary: Biological Process
TermDefinition
GO:0006357regulation of transcription by RNA polymerase II
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_003533KYF_003533Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_003533-T1.exon1KYF_003533-T1.exon1Aspergillus niger KYF3exon
KYF_003533-T1.exon2KYF_003533-T1.exon2Aspergillus niger KYF3exon
KYF_003533-T1.exon3KYF_003533-T1.exon3Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_003533-T1.cdsKYF_003533-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_003533-T1KYF_003533-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR010684
DBxrefPFAM:PF06881
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:1700321..1701542 +
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