You are here

Home

KYF_003607-T1, KYF_003607-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_003607-T1
Unique NameKYF_003607-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:2079618..2080055+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_003607-T1 ID=KYF_003607-T1|Name=KYF_003607-T1|organism=Aspergillus niger KYF3|type=mRNA|length=438bp|location=Sequence derived from alignment at ch3:2079618..2080055+ (Aspergillus niger KYF3)
ATGGTTCAGTTCTCCGAGGAAACCAAGGTTAGTCTGCGGTGCTCTGTTGC
CCGTCATACATAACTAGTCACGCTTGGTCTCGGTATGCTAACGGATATGC
CTACTATCTAGGAGCGTATCTCCAAGGTCATTGACGTCTCCAGAGTTGCT
ATTCACTAGTTCGTCGCATCTTGATTCTTTCGAGCAATGTGTCCTGACCA
AAACTGACGGTTATGTTTGCATAAGTGGATACCTGCCATTGATCGTCTAT
CTCGGTACGTGTGATGGAATTATTTTTCTTGATGGAAATTTTCTTTGCTA
ACGGAAGCGGGACTAGGATACACTTACAGTGAACCCAAGCCTTCTCTGTT
CAAGTATGAGCGACTGCGCCCTGCCGACGCTTCCCGACGATTCCAGCTCA
CTAACGCTACATATAGGCTGTTCTCGCCGCTCGCCTAG
back to top

Coding sequence (CDS) from alignment at ch3:2079618..2080055+

>KYF_003607-T1 ID=KYF_003607-T1|Name=KYF_003607-T1|organism=Aspergillus niger KYF3|type=CDS|length=900bp|location=Sequence derived from alignment at ch3:2079618..2080055+ (Aspergillus niger KYF3)
ATGGTTCAGTTCTCCGAGGAAACCAAGGAGCGTATCTCCAAGGTCATTGA
CGTCTCCAGAGTTGCTATTCACTATGGATACCTGCCATTGATCGTCTATC
TCGGATACACTTACAGTGAACCCAAGCCTTCTCTGTTCAAGTATGAGCGA
CTGCGCCCTGCCGACGCTTCCCGACGATTCCAGCTCACTAACGCTACATA
TAGGCTGTTCTCGCCGCTCGCCTAGATGGTTCAGTTCTCCGAGGAAACCA
AGGAGCGTATCTCCAAGGTCATTGACGTCTCCAGAGTTGCTATTCACTAT
GGATACCTGCCATTGATCGTCTATCTCGGATACACTTACAGTGAACCCAA
GCCTTCTCTGTTCAAGTATGAGCGACTGCGCCCTGCCGACGCTTCCCGAC
GATTCCAGCTCACTAACGCTACATATAGGCTGTTCTCGCCGCTCGCCTAG
ATGGTTCAGTTCTCCGAGGAAACCAAGGAGCGTATCTCCAAGGTCATTGA
CGTCTCCAGAGTTGCTATTCACTATGGATACCTGCCATTGATCGTCTATC
TCGGATACACTTACAGTGAACCCAAGCCTTCTCTGTTCAAGTATGAGCGA
CTGCGCCCTGCCGACGCTTCCCGACGATTCCAGCTCACTAACGCTACATA
TAGGCTGTTCTCGCCGCTCGCCTAGATGGTTCAGTTCTCCGAGGAAACCA
AGGAGCGTATCTCCAAGGTCATTGACGTCTCCAGAGTTGCTATTCACTAT
GGATACCTGCCATTGATCGTCTATCTCGGATACACTTACAGTGAACCCAA
GCCTTCTCTGTTCAAGTATGAGCGACTGCGCCCTGCCGACGCTTCCCGAC
GATTCCAGCTCACTAACGCTACATATAGGCTGTTCTCGCCGCTCGCCTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005742mitochondrial outer membrane translocase complex
Vocabulary: Biological Process
TermDefinition
GO:0030150protein import into mitochondrial matrix
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_003607KYF_003607Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_003607-T1.exon1KYF_003607-T1.exon1Aspergillus niger KYF3exon
KYF_003607-T1.exon2KYF_003607-T1.exon2Aspergillus niger KYF3exon
KYF_003607-T1.exon3KYF_003607-T1.exon3Aspergillus niger KYF3exon
KYF_003607-T1.exon4KYF_003607-T1.exon4Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_003607-T1.cdsKYF_003607-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_003607-T1KYF_003607-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR012621
DBxrefPFAM:PF08038
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:2079618..2080055 +
Powered by Drupal