You are here

Home

KYF_003608-T1, KYF_003608-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_003608-T1
Unique NameKYF_003608-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:2080534..2081871+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_003608-T1 ID=KYF_003608-T1|Name=KYF_003608-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1338bp|location=Sequence derived from alignment at ch3:2080534..2081871+ (Aspergillus niger KYF3)
ATGAACTTGAATCTTAGCTCCAGCTCAAATCCGGACCGAATCCGGACCTC
TTTAATCCTCCCGACACTTCCGGCTAGAATCTCAAACACCTGCAAGCGGC
ACATTCCAGGAGGACTCGAAGGGTTAATGACTGGCAAGGATGGCTTGTCC
TCGTCCTTTGTGGAGACCGTAGCGGGATTCACGGCCGGAATCGCTTCGAC
GCTCTGCCTGCATCCGCTAGATCTGATCAAGACTCGACTTCAAGGTTAGT
GGTTCATCTCTCGAGGAAGAAGACAAGTCGCGAAGCGCGGATCAATCTCC
AATATTTGATCAGCATTCAAATTATGACTAACGCAGTATCAATCTGCCAT
ATTTTCTAGTCGACCGGTTACCCTCTTCACGAGTCGGCGGTTCAGTCCCA
GTGATTCGCGAGATCTTTCAGAATGAGGGCGGCATTAAAGCCTTTTACAG
AGGCCTGACACCCAACATATTTGGGAATTCCACAAGTTGGGCGCTCTACT
TCTTGTGCTACGGCAACATCAAGGGCGTGATGCGCAGCTGGCGTAGTGGT
TCTCAAGACCAGGCCCTCACCTCGGCCGACTACTTCCTAGCCTCAGGATC
CGCAGGTACGCTCCAGAAGCAGAAAAGAAACAGACCTGCGATGTTTTCTC
CCAAGAAAGCACCGGGTATGCAGTTCCGAAGCGGGAGATGAGGCTAATTC
ACGGAATTTTGATTCTCACAGGGATGTTGACATCCGCGCTAACCAATCCG
ATCTGGGTGATAAAAACCCGCATGCTGTCGACGGGATCCCAGAGCCCCGG
GGCATACGCGTCGTTCACGACGGGTGCGAAGGAAATTCTTCGCTCGGAGG
GTATTGCGGGCTTTTATCGGGGTCTGGTTCCAGCCCTGTTTGGAGTCAGC
CATGGTGCACTTCAATTCATGGCGTATGAGCAGTTGAAACTGCATCGCTC
CCGGATGGCTCCTTCGGCCGGAACAACCGGCGTTCGACGGGATGCTGATT
GGAGCCATGTGTCGTCGTCGGACGCGGCCCGGTCGGGGATACGGGAGCTG
GGAAATGTGGACTTATTCGTGATCTCGAGCTTGTCAAAACTATTCGCCGG
GTGTGTTACCTATCCGTATCAGGTGTTGCGGTCTCGTTTACAGACATATG
ATGCTCACCTCGTGTATTCGGGCGTCAGGGATGCCGTTGCTCAGATTTGG
GCTAGAGAAGGTATCACTGGCTTCTATAAGGGTCTTGGCCCCAATTTGCT
GCGCGTGTTGCCCAGTACGTGGGTCACTTTCCTGGTGTATGAAAATACAA
GAGCGTATCTACCAAGGTTGTTTTCCAACCTTCGATAG
back to top

Coding sequence (CDS) from alignment at ch3:2080534..2081871+

>KYF_003608-T1 ID=KYF_003608-T1|Name=KYF_003608-T1|organism=Aspergillus niger KYF3|type=CDS|length=3321bp|location=Sequence derived from alignment at ch3:2080534..2081871+ (Aspergillus niger KYF3)
ATGAACTTGAATCTTAGCTCCAGCTCAAATCCGGACCGAATCCGGACCTC
TTTAATCCTCCCGACACTTCCGGCTAGAATCTCAAACACCTGCAAGCGGC
ACATTCCAGGAGGACTCGAAGGGTTAATGACTGGCAAGGATGGCTTGTCC
TCGTCCTTTGTGGAGACCGTAGCGGGATTCACGGCCGGAATCGCTTCGAC
GCTCTGCCTGCATCCGCTAGATCTGATCAAGACTCGACTTCAAGTCGACC
GGTTACCCTCTTCACGAGTCGGCGGTTCAGTCCCAGTGATTCGCGAGATC
TTTCAGAATGAGGGCGGCATTAAAGCCTTTTACAGAGGCCTGACACCCAA
CATATTTGGGAATTCCACAAGTTGGGCGCTCTACTTCTTGTGCTACGGCA
ACATCAAGGGCGTGATGCGCAGCTGGCGTAGTGGTTCTCAAGACCAGGCC
CTCACCTCGGCCGACTACTTCCTAGCCTCAGGATCCGCAGGGATGTTGAC
ATCCGCGCTAACCAATCCGATCTGGGTGATAAAAACCCGCATGCTGTCGA
CGGGATCCCAGAGCCCCGGGGCATACGCGTCGTTCACGACGGGTGCGAAG
GAAATTCTTCGCTCGGAGGGTATTGCGGGCTTTTATCGGGGTCTGGTTCC
AGCCCTGTTTGGAGTCAGCCATGGTGCACTTCAATTCATGGCGTATGAGC
AGTTGAAACTGCATCGCTCCCGGATGGCTCCTTCGGCCGGAACAACCGGC
GTTCGACGGGATGCTGATTGGAGCCATGTGTCGTCGTCGGACGCGGCCCG
GTCGGGGATACGGGAGCTGGGAAATGTGGACTTATTCGTGATCTCGAGCT
TGTCAAAACTATTCGCCGGGTGTGTTACCTATCCGTATCAGGTGTTGCGG
TCTCGTTTACAGACATATGATGCTCACCTCGTGTATTCGGGCGTCAGGGA
TGCCGTTGCTCAGATTTGGGCTAGAGAAGGTATCACTGGCTTCTATAAGG
GTCTTGGCCCCAATTTGCTGCGCGTGTTGCCCAGTACGTGGGTCACTTTC
CTGGTGTATGAAAATACAAGAGCGTATCTACCAAGGTTGTTTTCCAACCT
TCGATAGATGAACTTGAATCTTAGCTCCAGCTCAAATCCGGACCGAATCC
GGACCTCTTTAATCCTCCCGACACTTCCGGCTAGAATCTCAAACACCTGC
AAGCGGCACATTCCAGGAGGACTCGAAGGGTTAATGACTGGCAAGGATGG
CTTGTCCTCGTCCTTTGTGGAGACCGTAGCGGGATTCACGGCCGGAATCG
CTTCGACGCTCTGCCTGCATCCGCTAGATCTGATCAAGACTCGACTTCAA
GTCGACCGGTTACCCTCTTCACGAGTCGGCGGTTCAGTCCCAGTGATTCG
CGAGATCTTTCAGAATGAGGGCGGCATTAAAGCCTTTTACAGAGGCCTGA
CACCCAACATATTTGGGAATTCCACAAGTTGGGCGCTCTACTTCTTGTGC
TACGGCAACATCAAGGGCGTGATGCGCAGCTGGCGTAGTGGTTCTCAAGA
CCAGGCCCTCACCTCGGCCGACTACTTCCTAGCCTCAGGATCCGCAGGGA
TGTTGACATCCGCGCTAACCAATCCGATCTGGGTGATAAAAACCCGCATG
CTGTCGACGGGATCCCAGAGCCCCGGGGCATACGCGTCGTTCACGACGGG
TGCGAAGGAAATTCTTCGCTCGGAGGGTATTGCGGGCTTTTATCGGGGTC
TGGTTCCAGCCCTGTTTGGAGTCAGCCATGGTGCACTTCAATTCATGGCG
TATGAGCAGTTGAAACTGCATCGCTCCCGGATGGCTCCTTCGGCCGGAAC
AACCGGCGTTCGACGGGATGCTGATTGGAGCCATGTGTCGTCGTCGGACG
CGGCCCGGTCGGGGATACGGGAGCTGGGAAATGTGGACTTATTCGTGATC
TCGAGCTTGTCAAAACTATTCGCCGGGTGTGTTACCTATCCGTATCAGGT
GTTGCGGTCTCGTTTACAGACATATGATGCTCACCTCGTGTATTCGGGCG
TCAGGGATGCCGTTGCTCAGATTTGGGCTAGAGAAGGTATCACTGGCTTC
TATAAGGGTCTTGGCCCCAATTTGCTGCGCGTGTTGCCCAGTACGTGGGT
CACTTTCCTGGTGTATGAAAATACAAGAGCGTATCTACCAAGGTTGTTTT
CCAACCTTCGATAGATGAACTTGAATCTTAGCTCCAGCTCAAATCCGGAC
CGAATCCGGACCTCTTTAATCCTCCCGACACTTCCGGCTAGAATCTCAAA
CACCTGCAAGCGGCACATTCCAGGAGGACTCGAAGGGTTAATGACTGGCA
AGGATGGCTTGTCCTCGTCCTTTGTGGAGACCGTAGCGGGATTCACGGCC
GGAATCGCTTCGACGCTCTGCCTGCATCCGCTAGATCTGATCAAGACTCG
ACTTCAAGTCGACCGGTTACCCTCTTCACGAGTCGGCGGTTCAGTCCCAG
TGATTCGCGAGATCTTTCAGAATGAGGGCGGCATTAAAGCCTTTTACAGA
GGCCTGACACCCAACATATTTGGGAATTCCACAAGTTGGGCGCTCTACTT
CTTGTGCTACGGCAACATCAAGGGCGTGATGCGCAGCTGGCGTAGTGGTT
CTCAAGACCAGGCCCTCACCTCGGCCGACTACTTCCTAGCCTCAGGATCC
GCAGGGATGTTGACATCCGCGCTAACCAATCCGATCTGGGTGATAAAAAC
CCGCATGCTGTCGACGGGATCCCAGAGCCCCGGGGCATACGCGTCGTTCA
CGACGGGTGCGAAGGAAATTCTTCGCTCGGAGGGTATTGCGGGCTTTTAT
CGGGGTCTGGTTCCAGCCCTGTTTGGAGTCAGCCATGGTGCACTTCAATT
CATGGCGTATGAGCAGTTGAAACTGCATCGCTCCCGGATGGCTCCTTCGG
CCGGAACAACCGGCGTTCGACGGGATGCTGATTGGAGCCATGTGTCGTCG
TCGGACGCGGCCCGGTCGGGGATACGGGAGCTGGGAAATGTGGACTTATT
CGTGATCTCGAGCTTGTCAAAACTATTCGCCGGGTGTGTTACCTATCCGT
ATCAGGTGTTGCGGTCTCGTTTACAGACATATGATGCTCACCTCGTGTAT
TCGGGCGTCAGGGATGCCGTTGCTCAGATTTGGGCTAGAGAAGGTATCAC
TGGCTTCTATAAGGGTCTTGGCCCCAATTTGCTGCGCGTGTTGCCCAGTA
CGTGGGTCACTTTCCTGGTGTATGAAAATACAAGAGCGTATCTACCAAGG
TTGTTTTCCAACCTTCGATAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_003608KYF_003608Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_003608-T1.exon1KYF_003608-T1.exon1Aspergillus niger KYF3exon
KYF_003608-T1.exon2KYF_003608-T1.exon2Aspergillus niger KYF3exon
KYF_003608-T1.exon3KYF_003608-T1.exon3Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_003608-T1.cdsKYF_003608-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_003608-T1KYF_003608-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR023395
DBxrefInterPro:IPR018108
DBxrefInterPro:IPR002067
DBxrefPFAM:PF00153
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:2080534..2081871 +
Powered by Drupal