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KYF_003663-T1, KYF_003663-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_003663-T1
Unique NameKYF_003663-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:2254264..2254912-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_003663-T1 ID=KYF_003663-T1|Name=KYF_003663-T1|organism=Aspergillus niger KYF3|type=mRNA|length=649bp|location=Sequence derived from alignment at ch3:2254264..2254912- (Aspergillus niger KYF3)
ATGCCTGCCTCCGTCCACTCCGAAGAACAAGACCAGTCCATGCTGGACGC
CTCCGCGCCTCAAGAGCAAGAGCAGACCGATGTCCTAGAGCTGGACGAGA
AGCGCATTGTTGTTGTACGTATACACTACATACACTGTGGGACATGATTC
ACTTCCGGGCGTATGCTAATACCTGCTGGATGGGATAGTTGCCCGGCTCG
TCCGACACCGCAGCTTCGTTCCAATTCGAGGGAGAGGGTCACACTCTGGG
CAATGCGCTGCGGTATGCGATTATGAAGAAGTGCGTACACATACTCTACT
TTATTACAAACCCCTCTCTTCTCTGTTATGTTGGATCTTGCTAACGAGTT
TTCCTCGGGTTCAGCCCCGAAGTCGAATTCTGCGGTTACACCATCCCCCA
TCCTTCCGAGACGAAGATGAACCTTCGTATTCAGACTTATGGTTTGTTCT
TCCCGCCCTCCTACCTTCTTTTCCGTCAGAATAAAGATCACCTGTATTAA
CGAATGAACAAACAGAAACTACCACCGCCGTCGAAGCCCTCGAGAAAGGT
CTCGACACTCTAATGGACCTCTGTGATGTCGTGACGGACAAGTTCACGAC
TGCCCGTGATGACTTTAATGCTGCGCAGGCGGATCGCATGGAGGCTTAG
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Coding sequence (CDS) from alignment at ch3:2254264..2254912-

>KYF_003663-T1 ID=KYF_003663-T1|Name=KYF_003663-T1|organism=Aspergillus niger KYF3|type=CDS|length=1668bp|location=Sequence derived from alignment at ch3:2254264..2254912- (Aspergillus niger KYF3)
AAACTACCACCGCCGTCGAAGCCCTCGAGAAAGGTCTCGACACTCTAATG
GACCTCTGTGATGTCGTGACGGACAAGTTCACGACTGCCCGTGATGACTT
TAATGCTGCGCAGGCGGATCGCATGGAGGCTTAGCCCCGAAGTCGAATTC
TGCGGTTACACCATCCCCCATCCTTCCGAGACGAAGATGAACCTTCGTAT
TCAGACTTATGTTGCCCGGCTCGTCCGACACCGCAGCTTCGTTCCAATTC
GAGGGAGAGGGTCACACTCTGGGCAATGCGCTGCGGTATGCGATTATGAA
GAAATGCCTGCCTCCGTCCACTCCGAAGAACAAGACCAGTCCATGCTGGA
CGCCTCCGCGCCTCAAGAGCAAGAGCAGACCGATGTCCTAGAGCTGGACG
AGAAGCGCATTGTTGTTAAACTACCACCGCCGTCGAAGCCCTCGAGAAAG
GTCTCGACACTCTAATGGACCTCTGTGATGTCGTGACGGACAAGTTCACG
ACTGCCCGTGATGACTTTAATGCTGCGCAGGCGGATCGCATGGAGGCTTA
GCCCCGAAGTCGAATTCTGCGGTTACACCATCCCCCATCCTTCCGAGACG
AAGATGAACCTTCGTATTCAGACTTATGTTGCCCGGCTCGTCCGACACCG
CAGCTTCGTTCCAATTCGAGGGAGAGGGTCACACTCTGGGCAATGCGCTG
CGGTATGCGATTATGAAGAAATGCCTGCCTCCGTCCACTCCGAAGAACAA
GACCAGTCCATGCTGGACGCCTCCGCGCCTCAAGAGCAAGAGCAGACCGA
TGTCCTAGAGCTGGACGAGAAGCGCATTGTTGTTAAACTACCACCGCCGT
CGAAGCCCTCGAGAAAGGTCTCGACACTCTAATGGACCTCTGTGATGTCG
TGACGGACAAGTTCACGACTGCCCGTGATGACTTTAATGCTGCGCAGGCG
GATCGCATGGAGGCTTAGCCCCGAAGTCGAATTCTGCGGTTACACCATCC
CCCATCCTTCCGAGACGAAGATGAACCTTCGTATTCAGACTTATGTTGCC
CGGCTCGTCCGACACCGCAGCTTCGTTCCAATTCGAGGGAGAGGGTCACA
CTCTGGGCAATGCGCTGCGGTATGCGATTATGAAGAAATGCCTGCCTCCG
TCCACTCCGAAGAACAAGACCAGTCCATGCTGGACGCCTCCGCGCCTCAA
GAGCAAGAGCAGACCGATGTCCTAGAGCTGGACGAGAAGCGCATTGTTGT
TAAACTACCACCGCCGTCGAAGCCCTCGAGAAAGGTCTCGACACTCTAAT
GGACCTCTGTGATGTCGTGACGGACAAGTTCACGACTGCCCGTGATGACT
TTAATGCTGCGCAGGCGGATCGCATGGAGGCTTAGCCCCGAAGTCGAATT
CTGCGGTTACACCATCCCCCATCCTTCCGAGACGAAGATGAACCTTCGTA
TTCAGACTTATGTTGCCCGGCTCGTCCGACACCGCAGCTTCGTTCCAATT
CGAGGGAGAGGGTCACACTCTGGGCAATGCGCTGCGGTATGCGATTATGA
AGAAATGCCTGCCTCCGTCCACTCCGAAGAACAAGACCAGTCCATGCTGG
ACGCCTCCGCGCCTCAAGAGCAAGAGCAGACCGATGTCCTAGAGCTGGAC
GAGAAGCGCATTGTTGTT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003899DNA-directed 5'-3' RNA polymerase activity
GO:0046983protein dimerization activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPC19KYF_003663Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_003663-T1KYF_003663-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_003663-T1.cdsKYF_003663-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_003663-T1.exon4KYF_003663-T1.exon4Aspergillus niger KYF3exon
KYF_003663-T1.exon3KYF_003663-T1.exon3Aspergillus niger KYF3exon
KYF_003663-T1.exon2KYF_003663-T1.exon2Aspergillus niger KYF3exon
KYF_003663-T1.exon1KYF_003663-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
DBxrefInterPro:IPR033898
DBxrefInterPro:IPR008193
DBxrefInterPro:IPR009025
DBxrefInterPro:IPR036603
DBxrefPFAM:PF13656
DBxrefPFAM:PF01193
ProductRNA polymerase subunit AC19
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:2254264..2254912 -
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