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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:2326207..2328369+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_003690-T1 ID=KYF_003690-T1|Name=KYF_003690-T1|organism=Aspergillus niger KYF3|type=mRNA|length=2163bp|location=Sequence derived from alignment at ch3:2326207..2328369+ (Aspergillus niger KYF3)
ATGGCTTTTCGGGCTCGCTCCGTCGCCCTTCTTCGTTGGGGGTTGGAGCC
GAGATCATCCCAGCTGAGTGTGCTGGGTAGGAGACGTGGGTTGGCGACAG
TGTCAGATGGGACGCGGTATGTTTTTCCATCCTATACGGGGTTTTCTTTG
GTGGTTAGGTGCTAATTCTAGTTTGTTTACAGGGCATACGATGTGGTGGT
CATTGGAGGAGGCCATGCTGGCTCCGAAGCCTGTGCCGCGGCTGCTCGTT
CAGGCGCCCGAACCGCATTAATCACGCCCTCGCTATCCAACATCGGTGTC
TGTTCGTGTAATCCGAGTTTCGGTGGAATCGGAAAGGGTACCATGATACG
AGAAGTTGATGCGATGGACGGAGTCGCGGGACGAATTATTGATAAGGCCG
GTATTATGTTTCGCACGCTGAACCGATCCAAGGGCCCAGCTGTTTGGGGT
CCCCGTGCTCAGATTGATCGCGATCTGTATAAGAAGTATATGCAGGAGGA
GTTGCAGGGGACAGAAGGATTGAGCATCGTCGAGGGTAAGGTTGCGGATA
TCGTGGTGTCGAAGGATGGGGTCGAGCATACTCCCGGGGCGCAGGGCAAG
ATTGTTGGTGTTAGGCTGGAGTCTGGCGAGGTTATACCCACTGGCAAGGT
GGTTATCACAACGGGCACGTTCTTGGGTGGGGAGATTCATATTGGACTTG
AAGCATACCCGTCTGGTCGGATGGGTGAAGCTGCTACCTTCGGACTCAGT
AAGTCCTTGCGGGATGCCGGGTTCACGTTGGGTCGTTTGAAGACGGGCAC
ACCTCCGCGGTTGGATAGAAAGACGATCAATTTTGCGCCTCTGGAAGTTC
AGGAGGGTGATCATCCCCCGAGTCCGTTCTCCTATCTCAATGGCAGGGTT
CAGGTCGACGATGAGGCCCAGCTTACTTGCTGGATGACCTACACTAATGA
CGACGTTCACGATATTGTCCGAGCGAACCTGGACAAGACTATTCACATCC
GCGAGACCGTTAGGGGCCCCAGATACTGTCCTTCGCTCGAGTCTAAGATC
ATCCGCTTCACCGATAAGAAGCGCCATCTGATCTGGCTCGAGCCAGAGGG
TTTCGCGCCAAACGACGTCATCTACCCTAACGGTATATCCATGACCATTC
CCGCCGATGCCCAGTACGCCATGCTGCGAAAGGTTCACGGTCTCGAGAAC
GTGACCATGCTTCAACCCGGCTACGGAGTCGAGTACGACTACATCGACCC
GCGCAATCTCCGACCCACGCTCGAAACCAAACTCATCAGCGGTCTCTACC
TTGCCGGTCAGATCAACGGTACCACCGGCTACGAAGAAGCCGCTGGACAA
GGTATCATCGCTGGTACCAACGCTGGATTATCCGCCCAAGGTCGGGAACC
GCTCACTCTCCGCCGGTCCGACGCATTCATCGGCATCATGATCGACGACC
TCATCACAAAGGGCGTCTCCGAGCCCTACCGCATGTTCACAACGCGAAGC
GAATACCGCATTACCACTCGCTCCGATAACGCCGACCTCCGTCTCACCCG
GATGGCCCGCGAAGCCGGAATCGTCTCCGACAAGCGCTGGCGACACTTCA
CGGAAACGGAAGCGCAAATCAACGAGCTTCAAACCCTCCTCGAGAACACC
AAAATGTCCTCCTACGCCTGGGCTCGCAAAGGCTTCAAGGCCCGCATCGA
CCCCTCTCAACGCTCCGCTCTCGACCTCCTCTGTCTCCGTGAGAGCGATA
TTGACTCCCTCATCCCACATATCGAGTCCCCCACCGGCACCGTCTACTCT
GCCTCTTCTTTCCCTCCGGAGATCCGTAACCGTGTCTCCATTGAAGGCCG
CTACGCTCCCTTTGTGATCCGCCAGGAAAACGCAGCCAAAAAATCCCTCC
GCGACGAAAATCTGTCTATCCCTGCTGACTTGGACTATGCTACTGTTCAG
GGCATCAGCATCGAGGAAAAGCAGGCCCTGGAGCGCGTCCGTCCCGTCAG
TATCGGCATGGCGAGGCGCATCGAGGGCGTTACTCCGTCCGGTGTCCTGA
GGGTGCTCATGCATGTGCATAGGACCAGTAGAGATAGGACTGCAGCTTCT
GCTCCTCCTGCTTCGGAGGGGCTTGAGGAGACCCCTGATGATGTTATCAG
CCAGGCACCTTGA back to topCoding sequence (CDS) from alignment at ch3:2326207..2328369+ >KYF_003690-T1 ID=KYF_003690-T1|Name=KYF_003690-T1|organism=Aspergillus niger KYF3|type=CDS|length=4194bp|location=Sequence derived from alignment at ch3:2326207..2328369+ (Aspergillus niger KYF3)
ATGGCTTTTCGGGCTCGCTCCGTCGCCCTTCTTCGTTGGGGGTTGGAGCC
GAGATCATCCCAGCTGAGTGTGCTGGGTAGGAGACGTGGGTTGGCGACAG
TGTCAGATGGGACGCGGGCATACGATGTGGTGGTCATTGGAGGAGGCCAT
GCTGGCTCCGAAGCCTGTGCCGCGGCTGCTCGTTCAGGCGCCCGAACCGC
ATTAATCACGCCCTCGCTATCCAACATCGGTGTCTGTTCGTGTAATCCGA
GTTTCGGTGGAATCGGAAAGGGTACCATGATACGAGAAGTTGATGCGATG
GACGGAGTCGCGGGACGAATTATTGATAAGGCCGGTATTATGTTTCGCAC
GCTGAACCGATCCAAGGGCCCAGCTGTTTGGGGTCCCCGTGCTCAGATTG
ATCGCGATCTGTATAAGAAGTATATGCAGGAGGAGTTGCAGGGGACAGAA
GGATTGAGCATCGTCGAGGGTAAGGTTGCGGATATCGTGGTGTCGAAGGA
TGGGGTCGAGCATACTCCCGGGGCGCAGGGCAAGATTGTTGGTGTTAGGC
TGGAGTCTGGCGAGGTTATACCCACTGGCAAGGTGGTTATCACAACGGGC
ACGTTCTTGGGTGGGGAGATTCATATTGGACTTGAAGCATACCCGTCTGG
TCGGATGGGTGAAGCTGCTACCTTCGGACTCAGTAAGTCCTTGCGGGATG
CCGGGTTCACGTTGGGTCGTTTGAAGACGGGCACACCTCCGCGGTTGGAT
AGAAAGACGATCAATTTTGCGCCTCTGGAAGTTCAGGAGGGTGATCATCC
CCCGAGTCCGTTCTCCTATCTCAATGGCAGGGTTCAGGTCGACGATGAGG
CCCAGCTTACTTGCTGGATGACCTACACTAATGACGACGTTCACGATATT
GTCCGAGCGAACCTGGACAAGACTATTCACATCCGCGAGACCGTTAGGGG
CCCCAGATACTGTCCTTCGCTCGAGTCTAAGATCATCCGCTTCACCGATA
AGAAGCGCCATCTGATCTGGCTCGAGCCAGAGGGTTTCGCGCCAAACGAC
GTCATCTACCCTAACGGTATATCCATGACCATTCCCGCCGATGCCCAGTA
CGCCATGCTGCGAAAGGTTCACGGTCTCGAGAACGTGACCATGCTTCAAC
CCGGCTACGGAGTCGAGTACGACTACATCGACCCGCGCAATCTCCGACCC
ACGCTCGAAACCAAACTCATCAGCGGTCTCTACCTTGCCGGTCAGATCAA
CGGTACCACCGGCTACGAAGAAGCCGCTGGACAAGGTATCATCGCTGGTA
CCAACGCTGGATTATCCGCCCAAGGTCGGGAACCGCTCACTCTCCGCCGG
TCCGACGCATTCATCGGCATCATGATCGACGACCTCATCACAAAGGGCGT
CTCCGAGCCCTACCGCATGTTCACAACGCGAAGCGAATACCGCATTACCA
CTCGCTCCGATAACGCCGACCTCCGTCTCACCCGGATGGCCCGCGAAGCC
GGAATCGTCTCCGACAAGCGCTGGCGACACTTCACGGAAACGGAAGCGCA
AATCAACGAGCTTCAAACCCTCCTCGAGAACACCAAAATGTCCTCCTACG
CCTGGGCTCGCAAAGGCTTCAAGGCCCGCATCGACCCCTCTCAACGCTCC
GCTCTCGACCTCCTCTGTCTCCGTGAGAGCGATATTGACTCCCTCATCCC
ACATATCGAGTCCCCCACCGGCACCGTCTACTCTGCCTCTTCTTTCCCTC
CGGAGATCCGTAACCGTGTCTCCATTGAAGGCCGCTACGCTCCCTTTGTG
ATCCGCCAGGAAAACGCAGCCAAAAAATCCCTCCGCGACGAAAATCTGTC
TATCCCTGCTGACTTGGACTATGCTACTGTTCAGGGCATCAGCATCGAGG
AAAAGCAGGCCCTGGAGCGCGTCCGTCCCGTCAGTATCGGCATGGCGAGG
CGCATCGAGGGCGTTACTCCGTCCGGTGTCCTGAGGGTGCTCATGCATGT
GCATAGGACCAGTAGAGATAGGACTGCAGCTTCTGCTCCTCCTGCTTCGG
AGGGGCTTGAGGAGACCCCTGATGATGTTATCAGCCAGGCACCTTGAATG
GCTTTTCGGGCTCGCTCCGTCGCCCTTCTTCGTTGGGGGTTGGAGCCGAG
ATCATCCCAGCTGAGTGTGCTGGGTAGGAGACGTGGGTTGGCGACAGTGT
CAGATGGGACGCGGGCATACGATGTGGTGGTCATTGGAGGAGGCCATGCT
GGCTCCGAAGCCTGTGCCGCGGCTGCTCGTTCAGGCGCCCGAACCGCATT
AATCACGCCCTCGCTATCCAACATCGGTGTCTGTTCGTGTAATCCGAGTT
TCGGTGGAATCGGAAAGGGTACCATGATACGAGAAGTTGATGCGATGGAC
GGAGTCGCGGGACGAATTATTGATAAGGCCGGTATTATGTTTCGCACGCT
GAACCGATCCAAGGGCCCAGCTGTTTGGGGTCCCCGTGCTCAGATTGATC
GCGATCTGTATAAGAAGTATATGCAGGAGGAGTTGCAGGGGACAGAAGGA
TTGAGCATCGTCGAGGGTAAGGTTGCGGATATCGTGGTGTCGAAGGATGG
GGTCGAGCATACTCCCGGGGCGCAGGGCAAGATTGTTGGTGTTAGGCTGG
AGTCTGGCGAGGTTATACCCACTGGCAAGGTGGTTATCACAACGGGCACG
TTCTTGGGTGGGGAGATTCATATTGGACTTGAAGCATACCCGTCTGGTCG
GATGGGTGAAGCTGCTACCTTCGGACTCAGTAAGTCCTTGCGGGATGCCG
GGTTCACGTTGGGTCGTTTGAAGACGGGCACACCTCCGCGGTTGGATAGA
AAGACGATCAATTTTGCGCCTCTGGAAGTTCAGGAGGGTGATCATCCCCC
GAGTCCGTTCTCCTATCTCAATGGCAGGGTTCAGGTCGACGATGAGGCCC
AGCTTACTTGCTGGATGACCTACACTAATGACGACGTTCACGATATTGTC
CGAGCGAACCTGGACAAGACTATTCACATCCGCGAGACCGTTAGGGGCCC
CAGATACTGTCCTTCGCTCGAGTCTAAGATCATCCGCTTCACCGATAAGA
AGCGCCATCTGATCTGGCTCGAGCCAGAGGGTTTCGCGCCAAACGACGTC
ATCTACCCTAACGGTATATCCATGACCATTCCCGCCGATGCCCAGTACGC
CATGCTGCGAAAGGTTCACGGTCTCGAGAACGTGACCATGCTTCAACCCG
GCTACGGAGTCGAGTACGACTACATCGACCCGCGCAATCTCCGACCCACG
CTCGAAACCAAACTCATCAGCGGTCTCTACCTTGCCGGTCAGATCAACGG
TACCACCGGCTACGAAGAAGCCGCTGGACAAGGTATCATCGCTGGTACCA
ACGCTGGATTATCCGCCCAAGGTCGGGAACCGCTCACTCTCCGCCGGTCC
GACGCATTCATCGGCATCATGATCGACGACCTCATCACAAAGGGCGTCTC
CGAGCCCTACCGCATGTTCACAACGCGAAGCGAATACCGCATTACCACTC
GCTCCGATAACGCCGACCTCCGTCTCACCCGGATGGCCCGCGAAGCCGGA
ATCGTCTCCGACAAGCGCTGGCGACACTTCACGGAAACGGAAGCGCAAAT
CAACGAGCTTCAAACCCTCCTCGAGAACACCAAAATGTCCTCCTACGCCT
GGGCTCGCAAAGGCTTCAAGGCCCGCATCGACCCCTCTCAACGCTCCGCT
CTCGACCTCCTCTGTCTCCGTGAGAGCGATATTGACTCCCTCATCCCACA
TATCGAGTCCCCCACCGGCACCGTCTACTCTGCCTCTTCTTTCCCTCCGG
AGATCCGTAACCGTGTCTCCATTGAAGGCCGCTACGCTCCCTTTGTGATC
CGCCAGGAAAACGCAGCCAAAAAATCCCTCCGCGACGAAAATCTGTCTAT
CCCTGCTGACTTGGACTATGCTACTGTTCAGGGCATCAGCATCGAGGAAA
AGCAGGCCCTGGAGCGCGTCCGTCCCGTCAGTATCGGCATGGCGAGGCGC
ATCGAGGGCGTTACTCCGTCCGGTGTCCTGAGGGTGCTCATGCATGTGCA
TAGGACCAGTAGAGATAGGACTGCAGCTTCTGCTCCTCCTGCTTCGGAGG
GGCTTGAGGAGACCCCTGATGATGTTATCAGCCAGGCACCTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0002098 | tRNA wobble uridine modification |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR020595 |
| DBxref | InterPro:IPR004416 |
| DBxref | InterPro:IPR026904 |
| DBxref | InterPro:IPR036188 |
| DBxref | PFAM:PF13932 |
| DBxref | PFAM:PF01134 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:2326207..2328369 + |
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