You are here

Home

KYF_003869-T1, KYF_003869-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_003869-T1
Unique NameKYF_003869-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:2867188..2868421+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_003869-T1 ID=KYF_003869-T1|Name=KYF_003869-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1234bp|location=Sequence derived from alignment at ch3:2867188..2868421+ (Aspergillus niger KYF3)
ATGGCTAGCGTATCAACAGCTTCCAATGGGAGCAGACCCAGCACGTGGCA
GGGCGCTGGGGCAGCTGAGTTTGACCTGAGAAGTGAGTATGACTCATAGC
AGAAGAATGTTGCCATCGTGATGTCCGTTTTTGCTGAGAATCATGTGTCG
TAAGGTGATACAATGACCAAGCCAACTCCGGCAATGCTCGAGGCTATCTG
CCAGACCACACTTCTTGACGATGTCTTCGGTGAAGACCCAGTGACAAATG
ATCTTGAAGCTTATGTGGTAGAGCGTACTCAACATGAGAGCGCTCTCTTG
GTCATGTCTGGCACAATGGGCAACCAGGTTGCCATCCGCACGCACCTGAA
GGAACCGCCTTATTCTGTCTTGTGCGATCATCGGTCTCATATCATCTGTT
ACGAGGCTGGTGGAGTAAGCTCCCTCACGGGCGCTACTGTCATGCCCGTC
ACCCCGAAGAATGGTGTTCACCTTACTTTGGAGGACATAAAGAAACATGC
GGTACTCAGCGATAACATCCACTACTGCCCTACGAAGCTCATCAGTCTTG
AGAACACGTTGGATGGGATGGTTATGCCACTTTCTGAGGCTCGGCGTATC
ACTGAATGGGCCCATCAAAACAACATCAAGGTCCATCTGGATGGTGCGAG
ACTTTGGGAAGCAGTGGTGTCCGGTGCCGGTAGTTTGCCTGACTACACTA
CTTTGTTCGATAGCGTAAGCCTATGTTTCTCGAAGGGCTTAGGTGCCCCC
ATTGGAAGTATTATTGTTGGCTCGAACGAGTTCATCAAGAAAGCTCGATG
GTTTCGCAAATCCATCGGTGGTGGTGTACGTCAAGCTGGAGTCATCTCTG
CGGCGGCCCGCGTCGCGGTTGAGGAGACATTTGGACCAGACCCCAATGGA
CAGCAAGGGAAGCTTCTAGGGTCTCATCAGAGAGCAAAGAAGGTTGCCGA
TATGTGGACTAGCCGTGGAGGCAAGCTATCTCACCCGGTACAGACCAACA
TGGTGTGGTTGGACGTCGAGGGGTCGGGCTTGGGGCCTGATGACCTGGCT
GAGATCGGACGTGAAAAGGGGTTGAAGCTTGGGGGTAGTCGCATTGTCGT
CCACTACCGTAAGTATCCCTTTCCCATGCGAACTACTCTCTCCTAATCAA
TCTAACATGACTGCAGAGGTATCCGAAGAGTCCCTCTCTCGACTCGAGCA
GGTGTTTGAGGCAGCTATGAACAAGAAAGCTTGA
back to top

Coding sequence (CDS) from alignment at ch3:2867188..2868421+

>KYF_003869-T1 ID=KYF_003869-T1|Name=KYF_003869-T1|organism=Aspergillus niger KYF3|type=CDS|length=3312bp|location=Sequence derived from alignment at ch3:2867188..2868421+ (Aspergillus niger KYF3)
ATGGCTAGCGTATCAACAGCTTCCAATGGGAGCAGACCCAGCACGTGGCA
GGGCGCTGGGGCAGCTGAGTTTGACCTGAGAAGTGATACAATGACCAAGC
CAACTCCGGCAATGCTCGAGGCTATCTGCCAGACCACACTTCTTGACGAT
GTCTTCGGTGAAGACCCAGTGACAAATGATCTTGAAGCTTATGTGGTAGA
GCGTACTCAACATGAGAGCGCTCTCTTGGTCATGTCTGGCACAATGGGCA
ACCAGGTTGCCATCCGCACGCACCTGAAGGAACCGCCTTATTCTGTCTTG
TGCGATCATCGGTCTCATATCATCTGTTACGAGGCTGGTGGAGTAAGCTC
CCTCACGGGCGCTACTGTCATGCCCGTCACCCCGAAGAATGGTGTTCACC
TTACTTTGGAGGACATAAAGAAACATGCGGTACTCAGCGATAACATCCAC
TACTGCCCTACGAAGCTCATCAGTCTTGAGAACACGTTGGATGGGATGGT
TATGCCACTTTCTGAGGCTCGGCGTATCACTGAATGGGCCCATCAAAACA
ACATCAAGGTCCATCTGGATGGTGCGAGACTTTGGGAAGCAGTGGTGTCC
GGTGCCGGTAGTTTGCCTGACTACACTACTTTGTTCGATAGCGTAAGCCT
ATGTTTCTCGAAGGGCTTAGGTGCCCCCATTGGAAGTATTATTGTTGGCT
CGAACGAGTTCATCAAGAAAGCTCGATGGTTTCGCAAATCCATCGGTGGT
GGTGTACGTCAAGCTGGAGTCATCTCTGCGGCGGCCCGCGTCGCGGTTGA
GGAGACATTTGGACCAGACCCCAATGGACAGCAAGGGAAGCTTCTAGGGT
CTCATCAGAGAGCAAAGAAGGTTGCCGATATGTGGACTAGCCGTGGAGGC
AAGCTATCTCACCCGGTACAGACCAACATGGTGTGGTTGGACGTCGAGGG
GTCGGGCTTGGGGCCTGATGACCTGGCTGAGATCGGACGTGAAAAGGGGT
TGAAGCTTGGGGGTAGTCGCATTGTCGTCCACTACCAGGTATCCGAAGAG
TCCCTCTCTCGACTCGAGCAGGTGTTTGAGGCAGCTATGAACAAGAAAGC
TTGAATGGCTAGCGTATCAACAGCTTCCAATGGGAGCAGACCCAGCACGT
GGCAGGGCGCTGGGGCAGCTGAGTTTGACCTGAGAAGTGATACAATGACC
AAGCCAACTCCGGCAATGCTCGAGGCTATCTGCCAGACCACACTTCTTGA
CGATGTCTTCGGTGAAGACCCAGTGACAAATGATCTTGAAGCTTATGTGG
TAGAGCGTACTCAACATGAGAGCGCTCTCTTGGTCATGTCTGGCACAATG
GGCAACCAGGTTGCCATCCGCACGCACCTGAAGGAACCGCCTTATTCTGT
CTTGTGCGATCATCGGTCTCATATCATCTGTTACGAGGCTGGTGGAGTAA
GCTCCCTCACGGGCGCTACTGTCATGCCCGTCACCCCGAAGAATGGTGTT
CACCTTACTTTGGAGGACATAAAGAAACATGCGGTACTCAGCGATAACAT
CCACTACTGCCCTACGAAGCTCATCAGTCTTGAGAACACGTTGGATGGGA
TGGTTATGCCACTTTCTGAGGCTCGGCGTATCACTGAATGGGCCCATCAA
AACAACATCAAGGTCCATCTGGATGGTGCGAGACTTTGGGAAGCAGTGGT
GTCCGGTGCCGGTAGTTTGCCTGACTACACTACTTTGTTCGATAGCGTAA
GCCTATGTTTCTCGAAGGGCTTAGGTGCCCCCATTGGAAGTATTATTGTT
GGCTCGAACGAGTTCATCAAGAAAGCTCGATGGTTTCGCAAATCCATCGG
TGGTGGTGTACGTCAAGCTGGAGTCATCTCTGCGGCGGCCCGCGTCGCGG
TTGAGGAGACATTTGGACCAGACCCCAATGGACAGCAAGGGAAGCTTCTA
GGGTCTCATCAGAGAGCAAAGAAGGTTGCCGATATGTGGACTAGCCGTGG
AGGCAAGCTATCTCACCCGGTACAGACCAACATGGTGTGGTTGGACGTCG
AGGGGTCGGGCTTGGGGCCTGATGACCTGGCTGAGATCGGACGTGAAAAG
GGGTTGAAGCTTGGGGGTAGTCGCATTGTCGTCCACTACCAGGTATCCGA
AGAGTCCCTCTCTCGACTCGAGCAGGTGTTTGAGGCAGCTATGAACAAGA
AAGCTTGAATGGCTAGCGTATCAACAGCTTCCAATGGGAGCAGACCCAGC
ACGTGGCAGGGCGCTGGGGCAGCTGAGTTTGACCTGAGAAGTGATACAAT
GACCAAGCCAACTCCGGCAATGCTCGAGGCTATCTGCCAGACCACACTTC
TTGACGATGTCTTCGGTGAAGACCCAGTGACAAATGATCTTGAAGCTTAT
GTGGTAGAGCGTACTCAACATGAGAGCGCTCTCTTGGTCATGTCTGGCAC
AATGGGCAACCAGGTTGCCATCCGCACGCACCTGAAGGAACCGCCTTATT
CTGTCTTGTGCGATCATCGGTCTCATATCATCTGTTACGAGGCTGGTGGA
GTAAGCTCCCTCACGGGCGCTACTGTCATGCCCGTCACCCCGAAGAATGG
TGTTCACCTTACTTTGGAGGACATAAAGAAACATGCGGTACTCAGCGATA
ACATCCACTACTGCCCTACGAAGCTCATCAGTCTTGAGAACACGTTGGAT
GGGATGGTTATGCCACTTTCTGAGGCTCGGCGTATCACTGAATGGGCCCA
TCAAAACAACATCAAGGTCCATCTGGATGGTGCGAGACTTTGGGAAGCAG
TGGTGTCCGGTGCCGGTAGTTTGCCTGACTACACTACTTTGTTCGATAGC
GTAAGCCTATGTTTCTCGAAGGGCTTAGGTGCCCCCATTGGAAGTATTAT
TGTTGGCTCGAACGAGTTCATCAAGAAAGCTCGATGGTTTCGCAAATCCA
TCGGTGGTGGTGTACGTCAAGCTGGAGTCATCTCTGCGGCGGCCCGCGTC
GCGGTTGAGGAGACATTTGGACCAGACCCCAATGGACAGCAAGGGAAGCT
TCTAGGGTCTCATCAGAGAGCAAAGAAGGTTGCCGATATGTGGACTAGCC
GTGGAGGCAAGCTATCTCACCCGGTACAGACCAACATGGTGTGGTTGGAC
GTCGAGGGGTCGGGCTTGGGGCCTGATGACCTGGCTGAGATCGGACGTGA
AAAGGGGTTGAAGCTTGGGGGTAGTCGCATTGTCGTCCACTACCAGGTAT
CCGAAGAGTCCCTCTCTCGACTCGAGCAGGTGTTTGAGGCAGCTATGAAC
AAGAAAGCTTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006520cellular amino acid metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016829lyase activity
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_003869KYF_003869Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_003869-T1.exon1KYF_003869-T1.exon1Aspergillus niger KYF3exon
KYF_003869-T1.exon2KYF_003869-T1.exon2Aspergillus niger KYF3exon
KYF_003869-T1.exon3KYF_003869-T1.exon3Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_003869-T1.cdsKYF_003869-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_003869-T1KYF_003869-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR015424
DBxrefInterPro:IPR015421
DBxrefInterPro:IPR001597
DBxrefInterPro:IPR015422
DBxrefInterPro:IPR023603
DBxrefPFAM:PF01212
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:2867188..2868421 +
Powered by Drupal