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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:3050162..3051214+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_003927-T1 ID=KYF_003927-T1|Name=KYF_003927-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1053bp|location=Sequence derived from alignment at ch3:3050162..3051214+ (Aspergillus niger KYF3)
ATGACAAACGAAAAGCAAACCTGGTTTATTACTGGCTGCTCCAGTGGCTT
CGGGGAGCAGTTTGTACGCCAACTTCGCGAACGGGGTGACAACGTCGTCG
CCACAGGCCGGAATGCTGAGAGCAAACTTGCGCACCTGAAGGATACCGGT
GCCACTATCCTTGAACTCGATGTTACGGCACCTCAGGAAGAGCTGAACGC
GAAGTTTCAGCAGGCCATCGATATCTATGGGGGAGTCGATGTACTCGTGA
ACAACGCGGGGTACATTCAATGCGGGGCTATCGAAGAGCTCACGTGAGTT
TTGGCCTGAGGACTTCTAGTCTTTTTGTTTGATAATCTCATTTGGGAAGG
ATATGTTTGACTGACTGAGACGTTAGACCGGAGGATATGAAACGATCCCT
CGACACTAACTTCCATGGGCCTATCAACCTGACCCGCGCTGCATTGCCGC
ATTTTCGCAGCAAGGGTGAGAAGGGTCAAGGTATGATCATTTACATGGGA
TCGCAGTCTGGTTTTTGGGGAGAGCCAGCTGCATCCGCGTACTGTGCCAG
TAAATTTGCTTTAGAAGGTATGCTTTACCAGTCTGTCCATCTGCTCCTAC
ACGACAAAGCTGACAGTAAAACTATTTCCCACCACAGGAGCCGTTGAAAG
TCTCTCTAAAGAGCTAGGCTGGCTTGCACCAGGCATCAAACCCCTCATTA
TAGAAGCAGGCATCTTCAGCACTGAGGTCATGAGGAATATCAACCATGTT
CCTTACCGAGTCGATTTCTACCGGGGCCTTAACGACGCGTGTCGCGTGCG
CGGAGAAGGCAACTACCGCAACCCACCGGGCAATGCCGTGGATTTGATTG
CCAAGATCATCCAGATTGCGAAGGGAGAGGGTATTGCAGAGGGCAAAGAG
ATCCCATTGCGTGTGCCGTTTGGTAGTGATTCTCTTGGATTCCTTAAGGA
GAAGGCGCGGGATATGATGCGCATTGCAGAGGAATGGGAAGAGATTGCCC
GCAGCACAGATTTCCCGGATCACAAGGGACCTATGCCAGATATACCGGCT
TGA back to topCoding sequence (CDS) from alignment at ch3:3050162..3051214+ >KYF_003927-T1 ID=KYF_003927-T1|Name=KYF_003927-T1|organism=Aspergillus niger KYF3|type=CDS|length=2439bp|location=Sequence derived from alignment at ch3:3050162..3051214+ (Aspergillus niger KYF3)
ATGACAAACGAAAAGCAAACCTGGTTTATTACTGGCTGCTCCAGTGGCTT
CGGGGAGCAGTTTGTACGCCAACTTCGCGAACGGGGTGACAACGTCGTCG
CCACAGGCCGGAATGCTGAGAGCAAACTTGCGCACCTGAAGGATACCGGT
GCCACTATCCTTGAACTCGATGTTACGGCACCTCAGGAAGAGCTGAACGC
GAAGTTTCAGCAGGCCATCGATATCTATGGGGGAGTCGATGTACTCGTGA
ACAACGCGGGGTACATTCAATGCGGGGCTATCGAAGAGCTCACACCGGAG
GATATGAAACGATCCCTCGACACTAACTTCCATGGGCCTATCAACCTGAC
CCGCGCTGCATTGCCGCATTTTCGCAGCAAGGGTGAGAAGGGTCAAGGAG
CCGTTGAAAGTCTCTCTAAAGAGCTAGGCTGGCTTGCACCAGGCATCAAA
CCCCTCATTATAGAAGCAGGCATCTTCAGCACTGAGGTCATGAGGAATAT
CAACCATGTTCCTTACCGAGTCGATTTCTACCGGGGCCTTAACGACGCGT
GTCGCGTGCGCGGAGAAGGCAACTACCGCAACCCACCGGGCAATGCCGTG
GATTTGATTGCCAAGATCATCCAGATTGCGAAGGGAGAGGGTATTGCAGA
GGGCAAAGAGATCCCATTGCGTGTGCCGTTTGGTAGTGATTCTCTTGGAT
TCCTTAAGGAGAAGGCGCGGGATATGATGCGCATTGCAGAGGAATGGGAA
GAGATTGCCCGCAGCACAGATTTCCCGGATCACAAGGGACCTATGCCAGA
TATACCGGCTTGAATGACAAACGAAAAGCAAACCTGGTTTATTACTGGCT
GCTCCAGTGGCTTCGGGGAGCAGTTTGTACGCCAACTTCGCGAACGGGGT
GACAACGTCGTCGCCACAGGCCGGAATGCTGAGAGCAAACTTGCGCACCT
GAAGGATACCGGTGCCACTATCCTTGAACTCGATGTTACGGCACCTCAGG
AAGAGCTGAACGCGAAGTTTCAGCAGGCCATCGATATCTATGGGGGAGTC
GATGTACTCGTGAACAACGCGGGGTACATTCAATGCGGGGCTATCGAAGA
GCTCACACCGGAGGATATGAAACGATCCCTCGACACTAACTTCCATGGGC
CTATCAACCTGACCCGCGCTGCATTGCCGCATTTTCGCAGCAAGGGTGAG
AAGGGTCAAGGAGCCGTTGAAAGTCTCTCTAAAGAGCTAGGCTGGCTTGC
ACCAGGCATCAAACCCCTCATTATAGAAGCAGGCATCTTCAGCACTGAGG
TCATGAGGAATATCAACCATGTTCCTTACCGAGTCGATTTCTACCGGGGC
CTTAACGACGCGTGTCGCGTGCGCGGAGAAGGCAACTACCGCAACCCACC
GGGCAATGCCGTGGATTTGATTGCCAAGATCATCCAGATTGCGAAGGGAG
AGGGTATTGCAGAGGGCAAAGAGATCCCATTGCGTGTGCCGTTTGGTAGT
GATTCTCTTGGATTCCTTAAGGAGAAGGCGCGGGATATGATGCGCATTGC
AGAGGAATGGGAAGAGATTGCCCGCAGCACAGATTTCCCGGATCACAAGG
GACCTATGCCAGATATACCGGCTTGAATGACAAACGAAAAGCAAACCTGG
TTTATTACTGGCTGCTCCAGTGGCTTCGGGGAGCAGTTTGTACGCCAACT
TCGCGAACGGGGTGACAACGTCGTCGCCACAGGCCGGAATGCTGAGAGCA
AACTTGCGCACCTGAAGGATACCGGTGCCACTATCCTTGAACTCGATGTT
ACGGCACCTCAGGAAGAGCTGAACGCGAAGTTTCAGCAGGCCATCGATAT
CTATGGGGGAGTCGATGTACTCGTGAACAACGCGGGGTACATTCAATGCG
GGGCTATCGAAGAGCTCACACCGGAGGATATGAAACGATCCCTCGACACT
AACTTCCATGGGCCTATCAACCTGACCCGCGCTGCATTGCCGCATTTTCG
CAGCAAGGGTGAGAAGGGTCAAGGAGCCGTTGAAAGTCTCTCTAAAGAGC
TAGGCTGGCTTGCACCAGGCATCAAACCCCTCATTATAGAAGCAGGCATC
TTCAGCACTGAGGTCATGAGGAATATCAACCATGTTCCTTACCGAGTCGA
TTTCTACCGGGGCCTTAACGACGCGTGTCGCGTGCGCGGAGAAGGCAACT
ACCGCAACCCACCGGGCAATGCCGTGGATTTGATTGCCAAGATCATCCAG
ATTGCGAAGGGAGAGGGTATTGCAGAGGGCAAAGAGATCCCATTGCGTGT
GCCGTTTGGTAGTGATTCTCTTGGATTCCTTAAGGAGAAGGCGCGGGATA
TGATGCGCATTGCAGAGGAATGGGAAGAGATTGCCCGCAGCACAGATTTC
CCGGATCACAAGGGACCTATGCCAGATATACCGGCTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0019290 | siderophore biosynthetic process |
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008667 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_3.7 |
| Note | EggNog:ENOG41 |
| Note | SMCOG1001:short-chain dehydrogenase/reductase SDR |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR002347 |
| DBxref | InterPro:IPR003560 |
| DBxref | PFAM:PF08659 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | putative secondary metabolism biosynthetic enzyme |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:3050162..3051214 + |
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