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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:3097843..3098962- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_003948-T1 ID=KYF_003948-T1|Name=KYF_003948-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1120bp|location=Sequence derived from alignment at ch3:3097843..3098962- (Aspergillus niger KYF3)
ATGCTGCCGACGTGTACCCGTTGCAGAAGCCGGAGGATCAAGGTACCTAC
CTTCCCTTATCGCAATTATCATCAAATAGTAGACTAAGGCACGTTCCTGC
AGTGCGACTCCTTGCTTCCAGCGTGCGCCAACTGCTCTAAGCATGATGTT
GAATGTACCTTTCGAGATGAAGCTTTGCAAGCAGATGTTACCCGAGGGTC
AGCAGGACGGCGTCCCACACTCAATCATCCATAGGCTCATCAATTCACAG
CTATCTCAAGACATTGCAGGATAGAATCGAGAAGCTGAACTCTGAGCTAG
CGTTGAACTCTCAAATCTCTTCAAGGTGAAAGGACGTCGTTGCCAGTATT
ATCTGCCCGAAGCTAATCTGACTATGGAGGGCGGAAGTGGCCTTACAGAG
AGGTCTCCTGATGGCATGTCAACACGGCCTTCCTTGGTCTCTTCCTTCAT
CCTTATGCCTAAATCTGGTAGAGATATGTACCTAGATCTTTCACTCTCAT
CACGTCTTGTCGAGGTCACACTCGAGGTACTTTCACAACATCACAAAACA
AATGACTGGAGGACTATTGATAAAGAAAGTGACCCGTTACCAGATATCCC
GCACCTTGACAGGTCCATGCTTACACCTGGCGTGGTGCGCGGGCTTCTGA
AAGACTACCATCGCTTCGTTCGACCAAAATATGATATCGTGGAGCTTGAT
ATTCTGAGCCATGACGGCATCCACCTACGGAAGCTCCCGGAAATGCGAAG
GTTTCAAATACTGATGGCCTGTTCTATTTCCGCCGCCCAAAAAACGTACA
AATCTCCAAATTGGAAGCCGTTCGCCCATACGTGTCGTGAGTGGGCTAAT
GACTTCATCGCCCCAATCATTTGTGCTGCGGACGCAGATTCTATGAAAGT
TATCCTACTACTTCTCGTATATGAACTGGCCGATCCAACTCGCGGCATCA
TCTGGGAACTCCTCGATGTTGCGCGAAGAACATGCTTGCAGCTAGGCTGG
AACCGAACCGCGTCGAACTCCAACGACTTCACTAGTAATGAGGAATCGGT
TTCAGCTGATCCTGTGAGAACCCATCTCATGTGCGTACTTAGGGAGATTG
AAGGGTGGGCACAGCACTGA back to topCoding sequence (CDS) from alignment at ch3:3097843..3098962- >KYF_003948-T1 ID=KYF_003948-T1|Name=KYF_003948-T1|organism=Aspergillus niger KYF3|type=CDS|length=2871bp|location=Sequence derived from alignment at ch3:3097843..3098962- (Aspergillus niger KYF3)
CGTTGAACTCTCAAATCTCTTCAAGGTGAAAGGACGTCGTTGCCAGTATT
ATCTGCCCGAAGCTAATCTGACTATGGAGGGCGGAAGTGGCCTTACAGAG
AGGTCTCCTGATGGCATGTCAACACGGCCTTCCTTGGTCTCTTCCTTCAT
CCTTATGCCTAAATCTGGTAGAGATATGTACCTAGATCTTTCACTCTCAT
CACGTCTTGTCGAGGTCACACTCGAGGTACTTTCACAACATCACAAAACA
AATGACTGGAGGACTATTGATAAAGAAAGTGACCCGTTACCAGATATCCC
GCACCTTGACAGGTCCATGCTTACACCTGGCGTGGTGCGCGGGCTTCTGA
AAGACTACCATCGCTTCGTTCGACCAAAATATGATATCGTGGAGCTTGAT
ATTCTGAGCCATGACGGCATCCACCTACGGAAGCTCCCGGAAATGCGAAG
GTTTCAAATACTGATGGCCTGTTCTATTTCCGCCGCCCAAAAAACGTACA
AATCTCCAAATTGGAAGCCGTTCGCCCATACGTGTCGTGAGTGGGCTAAT
GACTTCATCGCCCCAATCATTTGTGCTGCGGACGCAGATTCTATGAAAGT
TATCCTACTACTTCTCGTATATGAACTGGCCGATCCAACTCGCGGCATCA
TCTGGGAACTCCTCGATGTTGCGCGAAGAACATGCTTGCAGCTAGGCTGG
AACCGAACCGCGTCGAACTCCAACGACTTCACTAGTAATGAGGAATCGGT
TTCAGCTGATCCTGTGAGAACCCATCTCATGTGCGTACTTAGGGAGATTG
AAGGGTGGGCACAGCACTGATGCGACTCCTTGCTTCCAGCGTGCGCCAAC
TGCTCTAAGCATGATGTTGAATGTACCTTTCGAGATGAAGCTTTGCAAGC
AGATGTTACCCGAGGATGCTGCCGACGTGTACCCGTTGCAGAAGCCGGAG
GATCAAGCGTTGAACTCTCAAATCTCTTCAAGGTGAAAGGACGTCGTTGC
CAGTATTATCTGCCCGAAGCTAATCTGACTATGGAGGGCGGAAGTGGCCT
TACAGAGAGGTCTCCTGATGGCATGTCAACACGGCCTTCCTTGGTCTCTT
CCTTCATCCTTATGCCTAAATCTGGTAGAGATATGTACCTAGATCTTTCA
CTCTCATCACGTCTTGTCGAGGTCACACTCGAGGTACTTTCACAACATCA
CAAAACAAATGACTGGAGGACTATTGATAAAGAAAGTGACCCGTTACCAG
ATATCCCGCACCTTGACAGGTCCATGCTTACACCTGGCGTGGTGCGCGGG
CTTCTGAAAGACTACCATCGCTTCGTTCGACCAAAATATGATATCGTGGA
GCTTGATATTCTGAGCCATGACGGCATCCACCTACGGAAGCTCCCGGAAA
TGCGAAGGTTTCAAATACTGATGGCCTGTTCTATTTCCGCCGCCCAAAAA
ACGTACAAATCTCCAAATTGGAAGCCGTTCGCCCATACGTGTCGTGAGTG
GGCTAATGACTTCATCGCCCCAATCATTTGTGCTGCGGACGCAGATTCTA
TGAAAGTTATCCTACTACTTCTCGTATATGAACTGGCCGATCCAACTCGC
GGCATCATCTGGGAACTCCTCGATGTTGCGCGAAGAACATGCTTGCAGCT
AGGCTGGAACCGAACCGCGTCGAACTCCAACGACTTCACTAGTAATGAGG
AATCGGTTTCAGCTGATCCTGTGAGAACCCATCTCATGTGCGTACTTAGG
GAGATTGAAGGGTGGGCACAGCACTGATGCGACTCCTTGCTTCCAGCGTG
CGCCAACTGCTCTAAGCATGATGTTGAATGTACCTTTCGAGATGAAGCTT
TGCAAGCAGATGTTACCCGAGGATGCTGCCGACGTGTACCCGTTGCAGAA
GCCGGAGGATCAAGCGTTGAACTCTCAAATCTCTTCAAGGTGAAAGGACG
TCGTTGCCAGTATTATCTGCCCGAAGCTAATCTGACTATGGAGGGCGGAA
GTGGCCTTACAGAGAGGTCTCCTGATGGCATGTCAACACGGCCTTCCTTG
GTCTCTTCCTTCATCCTTATGCCTAAATCTGGTAGAGATATGTACCTAGA
TCTTTCACTCTCATCACGTCTTGTCGAGGTCACACTCGAGGTACTTTCAC
AACATCACAAAACAAATGACTGGAGGACTATTGATAAAGAAAGTGACCCG
TTACCAGATATCCCGCACCTTGACAGGTCCATGCTTACACCTGGCGTGGT
GCGCGGGCTTCTGAAAGACTACCATCGCTTCGTTCGACCAAAATATGATA
TCGTGGAGCTTGATATTCTGAGCCATGACGGCATCCACCTACGGAAGCTC
CCGGAAATGCGAAGGTTTCAAATACTGATGGCCTGTTCTATTTCCGCCGC
CCAAAAAACGTACAAATCTCCAAATTGGAAGCCGTTCGCCCATACGTGTC
GTGAGTGGGCTAATGACTTCATCGCCCCAATCATTTGTGCTGCGGACGCA
GATTCTATGAAAGTTATCCTACTACTTCTCGTATATGAACTGGCCGATCC
AACTCGCGGCATCATCTGGGAACTCCTCGATGTTGCGCGAAGAACATGCT
TGCAGCTAGGCTGGAACCGAACCGCGTCGAACTCCAACGACTTCACTAGT
AATGAGGAATCGGTTTCAGCTGATCCTGTGAGAACCCATCTCATGTGCGT
ACTTAGGGAGATTGAAGGGTGGGCACAGCACTGATGCGACTCCTTGCTTC
CAGCGTGCGCCAACTGCTCTAAGCATGATGTTGAATGTACCTTTCGAGAT
GAAGCTTTGCAAGCAGATGTTACCCGAGGATGCTGCCGACGTGTACCCGT
TGCAGAAGCCGGAGGATCAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:3097843..3098962 - |
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