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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:3099324..3101445+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_003949-T1 ID=KYF_003949-T1|Name=KYF_003949-T1|organism=Aspergillus niger KYF3|type=mRNA|length=2122bp|location=Sequence derived from alignment at ch3:3099324..3101445+ (Aspergillus niger KYF3)
ATGCCACGATCGAGACGCTCAACTAAAGTATGTTCCCGCTGCCGGAAGCG
CAAAACGAAGGTTCGATCCCACAATACCTTCTTCCAATTATTTCTTCTGT
TGCTGTAACGTCCGTGCTACATCCATACTCCCTCTCTAACGCGGCCATGC
ACCAATAGTGTGACTTCATCTTCCCAGCATGTACTCCATGCAAACTGGCA
AATTTGCCTTGCTTGGGCTTTGATCCTAGCTCCAAGGAGGCAGTCCCCAG
AAGGTATATATCACATCTCGTCTATAGTCACTGGGGACTGACATTGTGTT
CCAAGCTTCGTCAAGTCACTCGAAGCTCAGGTGGAAGAGCTCGAAGCACG
ACTGCTTTCGTTCAACGCCGCTTCCACCAACGTTCCGTATCTCATCACTA
CGGCCGTGGCACAGGCCACCATATCCATTGGCATTCCCTTTCAGAACTCG
TTTCTCGACTCCAAAGCCTCATCTTCATTGTTCTTCCGGCCCTCCTGTCC
CCCATTGGCAATAGCCCGGGAACGGGGACAATCCACTCCTGAGAGACATC
CCAGCTTACAGAATAATCGACACAATCCCGGCGCGCCCATTAATTTACGT
AGTGTTCCATTTTCTGCAATCAATCGTATGATTCGGAATTATGTCGACAT
CCACTTGCCTCAGTACCCCTGCGTGTCAGAAAACGCGGTAAATGAAATAC
TGGACAGGATCCAGCATCAGGACCTGAAGGACCCAAATGCTCTCCCGATC
CACCATGTACCCACTGATGCTGGCCTGGGGCATTTCGAATATTTTGTATT
GCTTATCGCACTTGCAATCTCTGCGATGACATTGACCTGGAAGGCCGATT
ACCAAGCTCGAGTGGCTTCGGAGTCTTTCTATAACGCCGCCGTAAAACAC
CTACAGGCCATGACAGACCATAGCGAGATTCAGGCACTACAAATTTCTTT
GCTCCTAGCTCACTATGCGCATATGTGCCCAGAGAGGGTAGACAATTGGA
CTTGCATTTCTAACGCGGTCCGGATTGTCCTAAATCTTGGACTCTATCTG
GAGTGCAATCAACTGGTTCATGGTGAGCCTTATCAGCGAAGCGTACTATT
TTGGGTAGCGTACGGTATGGAGAGGTCATTATGTACGAACCTCCGCCTAC
CCTTATCATTTCCGGAAGAGGCAATCACGGTAAAGGTAGGTTTCCCAGAC
GACCCTCTGGCTCTTTGAGAAACTCAAGAAATTCCAGTTTCCCACAGGAG
AAGAGACAAATCTCCATACGGAACACTCCACCGGTAGGCCGTGCAAGAAG
TATGTCGCTTACCATATATGTCGGTACCGTGCACTAGAGACAGAAGTTCA
TAGAGTGCTTCATCTGGAAGAAGACTTGACCAAGTTCGGCAATAACACTA
TAGAGGAATGGATTGAAAGCATCACCCAGAGATTGGAACAGTGGTACGAG
ACGGCACAGTCGTACACAAAGTATGATATGCTTGAATTCAAACATGTGCA
GTTTCACCACCTCATGGCACGCATCCACCGGCCAACGCCGCGTCTAAGAT
TGAGAGGTCCAGACAACTGGAAAGCTGTGTTAAACGCATCATCCGTTTTG
ATACAGGACTACCTCGCTCAGGAGCGACGTCGGAGGCTGTTCTATCCTTG
GCATGGGGTACATATTCTCTTCGAAACTGCCGTCATCTCGCTGGAGGCAT
GCTGGTCAGCACGGAATTATGAACCGCTACAAGTTAGGGCTCATGAGATG
TTGCAGATCTCGATTCCTCGATGTCTTCAGCTTCTCACCAACATCGGTGA
ACGTTGGGGTGAAGCAGCCGTATGTGCTGATCGGTTAAGGCCGCTCGTTG
ATACTGTCAGGACCGCTTTTAACAATCCCGATACGCTGTTGCTGACTATG
ATTGATGAGAGTGTGATCACGGCAGAGATACTTGATTTACTTTTCACGGA
TGGGCCATTGTCATGGACCCGAGCCAACCGTGGGGAGATAATGTCTGACA
TGATTGAGAGTGATCCATGGTTAAATAGCCTGGTGGATGACAGCCTCGAA
CTTTTCTCGTGGAATCCTGAATGGTGCATCATGCCTGCTGACGCAATCTC
CATCGAGGGATATACGCTTTAA back to topCoding sequence (CDS) from alignment at ch3:3099324..3101445+ >KYF_003949-T1 ID=KYF_003949-T1|Name=KYF_003949-T1|organism=Aspergillus niger KYF3|type=CDS|length=7548bp|location=Sequence derived from alignment at ch3:3099324..3101445+ (Aspergillus niger KYF3)
ATGCCACGATCGAGACGCTCAACTAAATGTGACTTCATCTTCCCAGCATG
TACTCCATGCAAACTGGCAAATTTGCCTTGCTTGGGCTTTGATCCTAGCT
CCAAGGAGGCAGTCCCCAGAAGCTTCGTCAAGTCACTCGAAGCTCAGGTG
GAAGAGCTCGAAGCACGACTGCTTTCGTTCAACGCCGCTTCCACCAACGT
TCCGTATCTCATCACTACGGCCGTGGCACAGGCCACCATATCCATTGGCA
TTCCCTTTCAGAACTCGTTTCTCGACTCCAAAGCCTCATCTTCATTGTTC
TTCCGGCCCTCCTGTCCCCCATTGGCAATAGCCCGGGAACGGGGACAATC
CACTCCTGAGAGACATCCCAGCTTACAGAATAATCGACACAATCCCGGCG
CGCCCATTAATTTACGTAGTGTTCCATTTTCTGCAATCAATCGTATGATT
CGGAATTATGTCGACATCCACTTGCCTCAGTACCCCTGCGTGTCAGAAAA
CGCGGTAAATGAAATACTGGACAGGATCCAGCATCAGGACCTGAAGGACC
CAAATGCTCTCCCGATCCACCATGTACCCACTGATGCTGGCCTGGGGCAT
TTCGAATATTTTGTATTGCTTATCGCACTTGCAATCTCTGCGATGACATT
GACCTGGAAGGCCGATTACCAAGCTCGAGTGGCTTCGGAGTCTTTCTATA
ACGCCGCCGTAAAACACCTACAGGCCATGACAGACCATAGCGAGATTCAG
GCACTACAAATTTCTTTGCTCCTAGCTCACTATGCGCATATGTGCCCAGA
GAGGGTAGACAATTGGACTTGCATTTCTAACGCGGTCCGGATTGTCCTAA
ATCTTGGACTCTATCTGGAGTGCAATCAACTGGTTCATGGTGAGCCTTAT
CAGCGAAGCGTACTATTTTGGGTAGCGTACGGTATGGAGAGGTCATTATG
TACGAACCTCCGCCTACCCTTATCATTTCCGGAAGAGGCAATCACGGTAA
AGTTTCCCACAGGAGAAGAGACAAATCTCCATACGGAACACTCCACCGGT
AGGCCGTGCAAGAAGTATGTCGCTTACCATATATGTCGGTACCGTGCACT
AGAGACAGAAGTTCATAGAGTGCTTCATCTGGAAGAAGACTTGACCAAGT
TCGGCAATAACACTATAGAGGAATGGATTGAAAGCATCACCCAGAGATTG
GAACAGTGGTACGAGACGGCACAGTCGTACACAAAGTATGATATGCTTGA
ATTCAAACATGTGCAGTTTCACCACCTCATGGCACGCATCCACCGGCCAA
CGCCGCGTCTAAGATTGAGAGGTCCAGACAACTGGAAAGCTGTGTTAAAC
GCATCATCCGTTTTGATACAGGACTACCTCGCTCAGGAGCGACGTCGGAG
GCTGTTCTATCCTTGGCATGGGGTACATATTCTCTTCGAAACTGCCGTCA
TCTCGCTGGAGGCATGCTGGTCAGCACGGAATTATGAACCGCTACAAGTT
AGGGCTCATGAGATGTTGCAGATCTCGATTCCTCGATGTCTTCAGCTTCT
CACCAACATCGGTGAACGTTGGGGTGAAGCAGCCGTATGTGCTGATCGGT
TAAGGCCGCTCGTTGATACTGTCAGGACCGCTTTTAACAATCCCGATACG
CTGTTGCTGACTATGATTGATGAGAGTGTGATCACGGCAGAGATACTTGA
TTTACTTTTCACGGATGGGCCATTGTCATGGACCCGAGCCAACCGTGGGG
AGATAATGTCTGACATGATTGAGAGTGATCCATGGTTAAATAGCCTGGTG
GATGACAGCCTCGAACTTTTCTCGTGGAATCCTGAATGGTGCATCATGCC
TGCTGACGCAATCTCCATCGAGGGATATACGCTTTAAATGCCACGATCGA
GACGCTCAACTAAATGTGACTTCATCTTCCCAGCATGTACTCCATGCAAA
CTGGCAAATTTGCCTTGCTTGGGCTTTGATCCTAGCTCCAAGGAGGCAGT
CCCCAGAAGCTTCGTCAAGTCACTCGAAGCTCAGGTGGAAGAGCTCGAAG
CACGACTGCTTTCGTTCAACGCCGCTTCCACCAACGTTCCGTATCTCATC
ACTACGGCCGTGGCACAGGCCACCATATCCATTGGCATTCCCTTTCAGAA
CTCGTTTCTCGACTCCAAAGCCTCATCTTCATTGTTCTTCCGGCCCTCCT
GTCCCCCATTGGCAATAGCCCGGGAACGGGGACAATCCACTCCTGAGAGA
CATCCCAGCTTACAGAATAATCGACACAATCCCGGCGCGCCCATTAATTT
ACGTAGTGTTCCATTTTCTGCAATCAATCGTATGATTCGGAATTATGTCG
ACATCCACTTGCCTCAGTACCCCTGCGTGTCAGAAAACGCGGTAAATGAA
ATACTGGACAGGATCCAGCATCAGGACCTGAAGGACCCAAATGCTCTCCC
GATCCACCATGTACCCACTGATGCTGGCCTGGGGCATTTCGAATATTTTG
TATTGCTTATCGCACTTGCAATCTCTGCGATGACATTGACCTGGAAGGCC
GATTACCAAGCTCGAGTGGCTTCGGAGTCTTTCTATAACGCCGCCGTAAA
ACACCTACAGGCCATGACAGACCATAGCGAGATTCAGGCACTACAAATTT
CTTTGCTCCTAGCTCACTATGCGCATATGTGCCCAGAGAGGGTAGACAAT
TGGACTTGCATTTCTAACGCGGTCCGGATTGTCCTAAATCTTGGACTCTA
TCTGGAGTGCAATCAACTGGTTCATGGTGAGCCTTATCAGCGAAGCGTAC
TATTTTGGGTAGCGTACGGTATGGAGAGGTCATTATGTACGAACCTCCGC
CTACCCTTATCATTTCCGGAAGAGGCAATCACGGTAAAGTTTCCCACAGG
AGAAGAGACAAATCTCCATACGGAACACTCCACCGGTAGGCCGTGCAAGA
AGTATGTCGCTTACCATATATGTCGGTACCGTGCACTAGAGACAGAAGTT
CATAGAGTGCTTCATCTGGAAGAAGACTTGACCAAGTTCGGCAATAACAC
TATAGAGGAATGGATTGAAAGCATCACCCAGAGATTGGAACAGTGGTACG
AGACGGCACAGTCGTACACAAAGTATGATATGCTTGAATTCAAACATGTG
CAGTTTCACCACCTCATGGCACGCATCCACCGGCCAACGCCGCGTCTAAG
ATTGAGAGGTCCAGACAACTGGAAAGCTGTGTTAAACGCATCATCCGTTT
TGATACAGGACTACCTCGCTCAGGAGCGACGTCGGAGGCTGTTCTATCCT
TGGCATGGGGTACATATTCTCTTCGAAACTGCCGTCATCTCGCTGGAGGC
ATGCTGGTCAGCACGGAATTATGAACCGCTACAAGTTAGGGCTCATGAGA
TGTTGCAGATCTCGATTCCTCGATGTCTTCAGCTTCTCACCAACATCGGT
GAACGTTGGGGTGAAGCAGCCGTATGTGCTGATCGGTTAAGGCCGCTCGT
TGATACTGTCAGGACCGCTTTTAACAATCCCGATACGCTGTTGCTGACTA
TGATTGATGAGAGTGTGATCACGGCAGAGATACTTGATTTACTTTTCACG
GATGGGCCATTGTCATGGACCCGAGCCAACCGTGGGGAGATAATGTCTGA
CATGATTGAGAGTGATCCATGGTTAAATAGCCTGGTGGATGACAGCCTCG
AACTTTTCTCGTGGAATCCTGAATGGTGCATCATGCCTGCTGACGCAATC
TCCATCGAGGGATATACGCTTTAAATGCCACGATCGAGACGCTCAACTAA
ATGTGACTTCATCTTCCCAGCATGTACTCCATGCAAACTGGCAAATTTGC
CTTGCTTGGGCTTTGATCCTAGCTCCAAGGAGGCAGTCCCCAGAAGCTTC
GTCAAGTCACTCGAAGCTCAGGTGGAAGAGCTCGAAGCACGACTGCTTTC
GTTCAACGCCGCTTCCACCAACGTTCCGTATCTCATCACTACGGCCGTGG
CACAGGCCACCATATCCATTGGCATTCCCTTTCAGAACTCGTTTCTCGAC
TCCAAAGCCTCATCTTCATTGTTCTTCCGGCCCTCCTGTCCCCCATTGGC
AATAGCCCGGGAACGGGGACAATCCACTCCTGAGAGACATCCCAGCTTAC
AGAATAATCGACACAATCCCGGCGCGCCCATTAATTTACGTAGTGTTCCA
TTTTCTGCAATCAATCGTATGATTCGGAATTATGTCGACATCCACTTGCC
TCAGTACCCCTGCGTGTCAGAAAACGCGGTAAATGAAATACTGGACAGGA
TCCAGCATCAGGACCTGAAGGACCCAAATGCTCTCCCGATCCACCATGTA
CCCACTGATGCTGGCCTGGGGCATTTCGAATATTTTGTATTGCTTATCGC
ACTTGCAATCTCTGCGATGACATTGACCTGGAAGGCCGATTACCAAGCTC
GAGTGGCTTCGGAGTCTTTCTATAACGCCGCCGTAAAACACCTACAGGCC
ATGACAGACCATAGCGAGATTCAGGCACTACAAATTTCTTTGCTCCTAGC
TCACTATGCGCATATGTGCCCAGAGAGGGTAGACAATTGGACTTGCATTT
CTAACGCGGTCCGGATTGTCCTAAATCTTGGACTCTATCTGGAGTGCAAT
CAACTGGTTCATGGTGAGCCTTATCAGCGAAGCGTACTATTTTGGGTAGC
GTACGGTATGGAGAGGTCATTATGTACGAACCTCCGCCTACCCTTATCAT
TTCCGGAAGAGGCAATCACGGTAAAGTTTCCCACAGGAGAAGAGACAAAT
CTCCATACGGAACACTCCACCGGTAGGCCGTGCAAGAAGTATGTCGCTTA
CCATATATGTCGGTACCGTGCACTAGAGACAGAAGTTCATAGAGTGCTTC
ATCTGGAAGAAGACTTGACCAAGTTCGGCAATAACACTATAGAGGAATGG
ATTGAAAGCATCACCCAGAGATTGGAACAGTGGTACGAGACGGCACAGTC
GTACACAAAGTATGATATGCTTGAATTCAAACATGTGCAGTTTCACCACC
TCATGGCACGCATCCACCGGCCAACGCCGCGTCTAAGATTGAGAGGTCCA
GACAACTGGAAAGCTGTGTTAAACGCATCATCCGTTTTGATACAGGACTA
CCTCGCTCAGGAGCGACGTCGGAGGCTGTTCTATCCTTGGCATGGGGTAC
ATATTCTCTTCGAAACTGCCGTCATCTCGCTGGAGGCATGCTGGTCAGCA
CGGAATTATGAACCGCTACAAGTTAGGGCTCATGAGATGTTGCAGATCTC
GATTCCTCGATGTCTTCAGCTTCTCACCAACATCGGTGAACGTTGGGGTG
AAGCAGCCGTATGTGCTGATCGGTTAAGGCCGCTCGTTGATACTGTCAGG
ACCGCTTTTAACAATCCCGATACGCTGTTGCTGACTATGATTGATGAGAG
TGTGATCACGGCAGAGATACTTGATTTACTTTTCACGGATGGGCCATTGT
CATGGACCCGAGCCAACCGTGGGGAGATAATGTCTGACATGATTGAGAGT
GATCCATGGTTAAATAGCCTGGTGGATGACAGCCTCGAACTTTTCTCGTG
GAATCCTGAATGGTGCATCATGCCTGCTGACGCAATCTCCATCGAGGGAT
ATACGCTTTAAATGCCACGATCGAGACGCTCAACTAAATGTGACTTCATC
TTCCCAGCATGTACTCCATGCAAACTGGCAAATTTGCCTTGCTTGGGCTT
TGATCCTAGCTCCAAGGAGGCAGTCCCCAGAAGCTTCGTCAAGTCACTCG
AAGCTCAGGTGGAAGAGCTCGAAGCACGACTGCTTTCGTTCAACGCCGCT
TCCACCAACGTTCCGTATCTCATCACTACGGCCGTGGCACAGGCCACCAT
ATCCATTGGCATTCCCTTTCAGAACTCGTTTCTCGACTCCAAAGCCTCAT
CTTCATTGTTCTTCCGGCCCTCCTGTCCCCCATTGGCAATAGCCCGGGAA
CGGGGACAATCCACTCCTGAGAGACATCCCAGCTTACAGAATAATCGACA
CAATCCCGGCGCGCCCATTAATTTACGTAGTGTTCCATTTTCTGCAATCA
ATCGTATGATTCGGAATTATGTCGACATCCACTTGCCTCAGTACCCCTGC
GTGTCAGAAAACGCGGTAAATGAAATACTGGACAGGATCCAGCATCAGGA
CCTGAAGGACCCAAATGCTCTCCCGATCCACCATGTACCCACTGATGCTG
GCCTGGGGCATTTCGAATATTTTGTATTGCTTATCGCACTTGCAATCTCT
GCGATGACATTGACCTGGAAGGCCGATTACCAAGCTCGAGTGGCTTCGGA
GTCTTTCTATAACGCCGCCGTAAAACACCTACAGGCCATGACAGACCATA
GCGAGATTCAGGCACTACAAATTTCTTTGCTCCTAGCTCACTATGCGCAT
ATGTGCCCAGAGAGGGTAGACAATTGGACTTGCATTTCTAACGCGGTCCG
GATTGTCCTAAATCTTGGACTCTATCTGGAGTGCAATCAACTGGTTCATG
GTGAGCCTTATCAGCGAAGCGTACTATTTTGGGTAGCGTACGGTATGGAG
AGGTCATTATGTACGAACCTCCGCCTACCCTTATCATTTCCGGAAGAGGC
AATCACGGTAAAGTTTCCCACAGGAGAAGAGACAAATCTCCATACGGAAC
ACTCCACCGGTAGGCCGTGCAAGAAGTATGTCGCTTACCATATATGTCGG
TACCGTGCACTAGAGACAGAAGTTCATAGAGTGCTTCATCTGGAAGAAGA
CTTGACCAAGTTCGGCAATAACACTATAGAGGAATGGATTGAAAGCATCA
CCCAGAGATTGGAACAGTGGTACGAGACGGCACAGTCGTACACAAAGTAT
GATATGCTTGAATTCAAACATGTGCAGTTTCACCACCTCATGGCACGCAT
CCACCGGCCAACGCCGCGTCTAAGATTGAGAGGTCCAGACAACTGGAAAG
CTGTGTTAAACGCATCATCCGTTTTGATACAGGACTACCTCGCTCAGGAG
CGACGTCGGAGGCTGTTCTATCCTTGGCATGGGGTACATATTCTCTTCGA
AACTGCCGTCATCTCGCTGGAGGCATGCTGGTCAGCACGGAATTATGAAC
CGCTACAAGTTAGGGCTCATGAGATGTTGCAGATCTCGATTCCTCGATGT
CTTCAGCTTCTCACCAACATCGGTGAACGTTGGGGTGAAGCAGCCGTATG
TGCTGATCGGTTAAGGCCGCTCGTTGATACTGTCAGGACCGCTTTTAACA
ATCCCGATACGCTGTTGCTGACTATGATTGATGAGAGTGTGATCACGGCA
GAGATACTTGATTTACTTTTCACGGATGGGCCATTGTCATGGACCCGAGC
CAACCGTGGGGAGATAATGTCTGACATGATTGAGAGTGATCCATGGTTAA
ATAGCCTGGTGGATGACAGCCTCGAACTTTTCTCGTGGAATCCTGAATGG
TGCATCATGCCTGCTGACGCAATCTCCATCGAGGGATATACGCTTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
| GO:0006351 | transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0003677 | DNA binding |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR001138 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR007219 |
| DBxref | PFAM:PF04082 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:3099324..3101445 + |
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