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KYF_004006-T1, KYF_004006-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_004006-T1
Unique NameKYF_004006-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:3250336..3252000-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_004006-T1 ID=KYF_004006-T1|Name=KYF_004006-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1665bp|location=Sequence derived from alignment at ch3:3250336..3252000- (Aspergillus niger KYF3)
ATGGAAGCTGCAGCGCATTCACTGCCCTCGAGTCAGGAATCAGACTTCGC
TGTGAATAATCATCTCCCTCATCGCGAAGAGTCCGATGAGAAAGGACATG
ACGCCGACGCCAGTGCCACCGATGATGATGTCCGCAAGATTACCGGTTTC
CGATGGTTTCTGATTTGCGCTGCTCTGTATCTCTCTGCTCTGATGTATGG
ACTTGATACAACCATCGCTGCGGATGTGCAGGGCGCCGTGATTGAGAGAT
TCGGGGACGTGTCGCAACTTGCATGGATTGGAGCCGGTTTCCCACTCGGT
TCAGTTGCCGTGATTCTCCCCTACGGGTTTCTCTATACCGTCATGAATAT
GAAGTGGCTCTACATTGCTGGAATCGTGTTATTCCAAGGTGGTTCTGCTC
TCTGTGGTGGTGCTCCAAATATGAACGCCCTTATTGTCGGCCGTGTGATT
GCAGGCGCTGGAGGTACAGGAATCTATCTCGGTGGACTTAACCATTTCTC
TGCCATGACCACCCGCAACGAGCGCGGCACCTATCTTACAGGAACCGGAT
TTGTCTGGGGCGTGGGTGCCATCCTGGGTCCCGTCGTGGGAGGCGGATTC
TCCGACTCCTCCGCCACCTGGCGCTGGGGTTTTTACCTGAACCTGGTAAT
CGGCGCCATCACAGCCCCCGTGTACCTCTTCTACCTCCCCGCCATTCACC
CCGGCGCGGGCCAATCTCTTCGCAAACGCTTAACGCGACTCGACTATCTG
GGATTCGTCCTCAGCGCGGCAATGTGGGTGACCTTCGCACTTGGCTTCAT
CTCTGCAGGAGGCATCTGGGCGTGGGACTCCGGCGCCACCATCGCGCTAA
TCGTGCTCTTCGGCGTCCTATTCATCCTTTACGCCCTCCAACAATACTTA
TGCATCTTCACTACGCCCCAAACGCGCTCCTTCCCCGGCCATCTCCTCCG
CTCCCGCACCCAAATCCTCCTCTACATCACAACGACCTGCGCCAACACCG
CCATGTTCTTCACGACCTTCTACATCCCAATCTACTTCCAGTTCACGCGC
AACGACTCCTCCCTAATGGCTGCCGTGCGCCTTCTCCCCTACCTCCTCGT
AACGATCACCATCAACCTCGCCATCGGCTGGCTCCTCCCAAAAGCCAAAT
ATTACATGCCGCTGTGCCTCATCTCAGGCATCCTCCTCACCCTCGCCAGC
GCCCTCTTTGTCGGATACCTCTCACCCTCTACCCCGGCAGGACAGATCTA
CGGTTTCACGATCCTCATGGCTGTCGGCACCGGCATGACCATGCAGCTGG
GGTATGCGGTAGCTAGTCTCAAGGTGCCTCCCGAGGATATCTTCAGCGCG
ATCAATTTGCAGAATGTGGCGCAGATTGGAGCTACAGTTATCTGTCTTGT
GGTGGCAAGTCAGGTGTTTCAGTCTACTGCAGTAAAGAATCTGAAAGGGG
TGTTGGATGGGAGGGGATATAGTGAGGCGGAGATACGGAATGCTGTAGCG
GGTGTGCAGAGTACGTTGTTGAAGAGCTTGAGTGGGGAGTTGAGGGATCG
GGCTATCAAGGCTATTACGGATGCGATGGCCAGGGCGTTTATTATTCCGT
TGGTGGCCGGAGCGGTGGGGGTGGTGAGTTCGCTGGGGATGAGGAGGGAG
AGGTTGTTTGGGTAG
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Coding sequence (CDS) from alignment at ch3:3250336..3252000-

>KYF_004006-T1 ID=KYF_004006-T1|Name=KYF_004006-T1|organism=Aspergillus niger KYF3|type=CDS|length=1665bp|location=Sequence derived from alignment at ch3:3250336..3252000- (Aspergillus niger KYF3)
ATGGAAGCTGCAGCGCATTCACTGCCCTCGAGTCAGGAATCAGACTTCGC
TGTGAATAATCATCTCCCTCATCGCGAAGAGTCCGATGAGAAAGGACATG
ACGCCGACGCCAGTGCCACCGATGATGATGTCCGCAAGATTACCGGTTTC
CGATGGTTTCTGATTTGCGCTGCTCTGTATCTCTCTGCTCTGATGTATGG
ACTTGATACAACCATCGCTGCGGATGTGCAGGGCGCCGTGATTGAGAGAT
TCGGGGACGTGTCGCAACTTGCATGGATTGGAGCCGGTTTCCCACTCGGT
TCAGTTGCCGTGATTCTCCCCTACGGGTTTCTCTATACCGTCATGAATAT
GAAGTGGCTCTACATTGCTGGAATCGTGTTATTCCAAGGTGGTTCTGCTC
TCTGTGGTGGTGCTCCAAATATGAACGCCCTTATTGTCGGCCGTGTGATT
GCAGGCGCTGGAGGTACAGGAATCTATCTCGGTGGACTTAACCATTTCTC
TGCCATGACCACCCGCAACGAGCGCGGCACCTATCTTACAGGAACCGGAT
TTGTCTGGGGCGTGGGTGCCATCCTGGGTCCCGTCGTGGGAGGCGGATTC
TCCGACTCCTCCGCCACCTGGCGCTGGGGTTTTTACCTGAACCTGGTAAT
CGGCGCCATCACAGCCCCCGTGTACCTCTTCTACCTCCCCGCCATTCACC
CCGGCGCGGGCCAATCTCTTCGCAAACGCTTAACGCGACTCGACTATCTG
GGATTCGTCCTCAGCGCGGCAATGTGGGTGACCTTCGCACTTGGCTTCAT
CTCTGCAGGAGGCATCTGGGCGTGGGACTCCGGCGCCACCATCGCGCTAA
TCGTGCTCTTCGGCGTCCTATTCATCCTTTACGCCCTCCAACAATACTTA
TGCATCTTCACTACGCCCCAAACGCGCTCCTTCCCCGGCCATCTCCTCCG
CTCCCGCACCCAAATCCTCCTCTACATCACAACGACCTGCGCCAACACCG
CCATGTTCTTCACGACCTTCTACATCCCAATCTACTTCCAGTTCACGCGC
AACGACTCCTCCCTAATGGCTGCCGTGCGCCTTCTCCCCTACCTCCTCGT
AACGATCACCATCAACCTCGCCATCGGCTGGCTCCTCCCAAAAGCCAAAT
ATTACATGCCGCTGTGCCTCATCTCAGGCATCCTCCTCACCCTCGCCAGC
GCCCTCTTTGTCGGATACCTCTCACCCTCTACCCCGGCAGGACAGATCTA
CGGTTTCACGATCCTCATGGCTGTCGGCACCGGCATGACCATGCAGCTGG
GGTATGCGGTAGCTAGTCTCAAGGTGCCTCCCGAGGATATCTTCAGCGCG
ATCAATTTGCAGAATGTGGCGCAGATTGGAGCTACAGTTATCTGTCTTGT
GGTGGCAAGTCAGGTGTTTCAGTCTACTGCAGTAAAGAATCTGAAAGGGG
TGTTGGATGGGAGGGGATATAGTGAGGCGGAGATACGGAATGCTGTAGCG
GGTGTGCAGAGTACGTTGTTGAAGAGCTTGAGTGGGGAGTTGAGGGATCG
GGCTATCAAGGCTATTACGGATGCGATGGCCAGGGCGTTTATTATTCCGT
TGGTGGCCGGAGCGGTGGGGGTGGTGAGTTCGCTGGGGATGAGGAGGGAG
AGGTTGTTTGGGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005887integral component of plasma membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_004006KYF_004006Aspergillus niger KYF3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_004006-T1.cdsKYF_004006-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_004006-T1.exon1KYF_004006-T1.exon1Aspergillus niger KYF3exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_004006-T1KYF_004006-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_3.8
NoteEggNog:ENOG41
NoteSMCOG1005: EmrB/QacA
NoteSMCOG1005:Drug resistance transporter
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:3250336..3252000 -
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