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KYF_004030-T1, KYF_004030-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_004030-T1
Unique NameKYF_004030-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:3322841..3323981-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_004030-T1 ID=KYF_004030-T1|Name=KYF_004030-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1141bp|location=Sequence derived from alignment at ch3:3322841..3323981- (Aspergillus niger KYF3)
ATGCACTCGTTTGCTTCTCTTCTCGCCTACGGCCTGGTCGCCGGCGCCAC
CTTCGCTTCTGCCTCTCCTATCGAAGCTCGAGACAGCTGCACGTTCACCA
CCGCTGCCGCTGCTAAAGCGGGCAAGGCGAAATGCTCTACTATCACCCTT
AACAACATCGAAGTTCCAGCTGGAACCACCCTCGACCTGACCGGTCTCAC
CAGCGGTACCAAGGTCATCTTCGAGGGCACCACGACCTTCCAGTACGAAG
AATGGGCAGGCCCCTTGATCTCCATGAGTGGCGAACATATCACCGTCACT
GGTGCCTCCGGCCACCTCATCAATTGCGATGGTGCGCGCTGGTGGGATGG
CAAGGGAACCAGCGGAAAGAAGAAGCCCAAGTTCTTTTACGCCCATGGCC
TTGACTCCTCGTCTATTACTGGATTAAACATCAAAAACACTCCCCTTATG
GCGTTTAGTGTCCAGGCGAATGACATTACGTTTACCGATGTTACCATCAA
TAATGCGGATGGCGACACCCAGGGTGGACACAACACTGATGCGTTCGATG
TTGGTAACTCGGTCGGGGTGAATATCATTAAGCCTTGGGTCCATAACCAG
GATGACTGTCTTGCGATTAACTCTGGCGAGGTAAGCAGCTCTACATATAT
GCTTGATTCGGAATTATATTGATATTCTGTAGAACATCTGGTTCACCGGC
GGCACCTGCATTGGCGGCCACGGTCTCTCCATCGGCTCTGTCGGCGACCG
CTCCAACAACGTCGTCAAGAACGTCACCATCGAACACTCCACCGTGAGCA
ATTCCGAAAACGCCGTCCGAATCAAGACCATCTCTGGCGCCACTGGCTCC
GTGTCTGAGATTACATACTCCAACATCGTCATGTCCGGCATCTCCGATTA
CGGCGTGGTCATTCAGCAGGATTACGAAGACGGCAAGCCTACGGGTAAGC
CGACGAACGGTGTCACTATTCAGGATGTCAAGCTGGAGAGCGTGACCGGT
AGCGTGGATAGTAAGGCTACTGAGATCTATCTTCTTTGCGGGTCTGGTAG
CTGCTCGGACTGGACCTGGGACGATGTGAAGGTTACTGGGGGGAAGAAGT
CCACCGCTTGCAAGAACTTCCCTTCGGTGGCCTCTTGCTAG
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Coding sequence (CDS) from alignment at ch3:3322841..3323981-

>KYF_004030-T1 ID=KYF_004030-T1|Name=KYF_004030-T1|organism=Aspergillus niger KYF3|type=CDS|length=2178bp|location=Sequence derived from alignment at ch3:3322841..3323981- (Aspergillus niger KYF3)
AACATCTGGTTCACCGGCGGCACCTGCATTGGCGGCCACGGTCTCTCCAT
CGGCTCTGTCGGCGACCGCTCCAACAACGTCGTCAAGAACGTCACCATCG
AACACTCCACCGTGAGCAATTCCGAAAACGCCGTCCGAATCAAGACCATC
TCTGGCGCCACTGGCTCCGTGTCTGAGATTACATACTCCAACATCGTCAT
GTCCGGCATCTCCGATTACGGCGTGGTCATTCAGCAGGATTACGAAGACG
GCAAGCCTACGGGTAAGCCGACGAACGGTGTCACTATTCAGGATGTCAAG
CTGGAGAGCGTGACCGGTAGCGTGGATAGTAAGGCTACTGAGATCTATCT
TCTTTGCGGGTCTGGTAGCTGCTCGGACTGGACCTGGGACGATGTGAAGG
TTACTGGGGGGAAGAAGTCCACCGCTTGCAAGAACTTCCCTTCGGTGGCC
TCTTGCTAGATGCACTCGTTTGCTTCTCTTCTCGCCTACGGCCTGGTCGC
CGGCGCCACCTTCGCTTCTGCCTCTCCTATCGAAGCTCGAGACAGCTGCA
CGTTCACCACCGCTGCCGCTGCTAAAGCGGGCAAGGCGAAATGCTCTACT
ATCACCCTTAACAACATCGAAGTTCCAGCTGGAACCACCCTCGACCTGAC
CGGTCTCACCAGCGGTACCAAGGTCATCTTCGAGGGCACCACGACCTTCC
AGTACGAAGAATGGGCAGGCCCCTTGATCTCCATGAGTGGCGAACATATC
ACCGTCACTGGTGCCTCCGGCCACCTCATCAATTGCGATGGTGCGCGCTG
GTGGGATGGCAAGGGAACCAGCGGAAAGAAGAAGCCCAAGTTCTTTTACG
CCCATGGCCTTGACTCCTCGTCTATTACTGGATTAAACATCAAAAACACT
CCCCTTATGGCGTTTAGTGTCCAGGCGAATGACATTACGTTTACCGATGT
TACCATCAATAATGCGGATGGCGACACCCAGGGTGGACACAACACTGATG
CGTTCGATGTTGGTAACTCGGTCGGGGTGAATATCATTAAGCCTTGGGTC
CATAACCAGGATGACTGTCTTGCGATTAACTCTGGCGAGAACATCTGGTT
CACCGGCGGCACCTGCATTGGCGGCCACGGTCTCTCCATCGGCTCTGTCG
GCGACCGCTCCAACAACGTCGTCAAGAACGTCACCATCGAACACTCCACC
GTGAGCAATTCCGAAAACGCCGTCCGAATCAAGACCATCTCTGGCGCCAC
TGGCTCCGTGTCTGAGATTACATACTCCAACATCGTCATGTCCGGCATCT
CCGATTACGGCGTGGTCATTCAGCAGGATTACGAAGACGGCAAGCCTACG
GGTAAGCCGACGAACGGTGTCACTATTCAGGATGTCAAGCTGGAGAGCGT
GACCGGTAGCGTGGATAGTAAGGCTACTGAGATCTATCTTCTTTGCGGGT
CTGGTAGCTGCTCGGACTGGACCTGGGACGATGTGAAGGTTACTGGGGGG
AAGAAGTCCACCGCTTGCAAGAACTTCCCTTCGGTGGCCTCTTGCTAGAT
GCACTCGTTTGCTTCTCTTCTCGCCTACGGCCTGGTCGCCGGCGCCACCT
TCGCTTCTGCCTCTCCTATCGAAGCTCGAGACAGCTGCACGTTCACCACC
GCTGCCGCTGCTAAAGCGGGCAAGGCGAAATGCTCTACTATCACCCTTAA
CAACATCGAAGTTCCAGCTGGAACCACCCTCGACCTGACCGGTCTCACCA
GCGGTACCAAGGTCATCTTCGAGGGCACCACGACCTTCCAGTACGAAGAA
TGGGCAGGCCCCTTGATCTCCATGAGTGGCGAACATATCACCGTCACTGG
TGCCTCCGGCCACCTCATCAATTGCGATGGTGCGCGCTGGTGGGATGGCA
AGGGAACCAGCGGAAAGAAGAAGCCCAAGTTCTTTTACGCCCATGGCCTT
GACTCCTCGTCTATTACTGGATTAAACATCAAAAACACTCCCCTTATGGC
GTTTAGTGTCCAGGCGAATGACATTACGTTTACCGATGTTACCATCAATA
ATGCGGATGGCGACACCCAGGGTGGACACAACACTGATGCGTTCGATGTT
GGTAACTCGGTCGGGGTGAATATCATTAAGCCTTGGGTCCATAACCAGGA
TGACTGTCTTGCGATTAACTCTGGCGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_004030KYF_004030Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_004030-T1KYF_004030-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_004030-T1.cdsKYF_004030-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_004030-T1.exon2KYF_004030-T1.exon2Aspergillus niger KYF3exon
KYF_004030-T1.exon1KYF_004030-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
NoteSECRETED:SignalP(1-21)
NoteCAZy:GH28
DBxrefInterPro:IPR011050
DBxrefInterPro:IPR000743
DBxrefInterPro:IPR012334
DBxrefInterPro:IPR006626
DBxrefPFAM:PF00295
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:3322841..3323981 -
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