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KYF_004059-T1, KYF_004059-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_004059-T1
Unique NameKYF_004059-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:3399462..3400413+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_004059-T1 ID=KYF_004059-T1|Name=KYF_004059-T1|organism=Aspergillus niger KYF3|type=mRNA|length=952bp|location=Sequence derived from alignment at ch3:3399462..3400413+ (Aspergillus niger KYF3)
ATGGCATCCACCTCCGGGGTAGGGTCGTATTCGAACCCTCTGAAGAAATT
CAAGTATGTCCCGCCTGCAGCATAACTTTCGGCTTTCCTTAATGTGCGGC
TAATCGAATTGCAGGCTGGTTTTCTTGGGCGAGCAGAGTGGTACGGATAT
CTTCTGCGACGATACTCCAATCATTGGCGCCACCCGGTCTCTGACATCTG
CCTTACAGTTGGAAAAACCTCATTGATCACACGGTTCATGTACGATTCAT
TCGACAACACGTACCAAGCGACCATTGGAATCGATTTCTTGTCAAAGGTA
TACTACGCCTAGTCGACTGCTTGTGCCCTGCATTAGCAGGCCCTCACCGA
GCCATTCTCACACGGTCTCATGGTTCCCAATACGCTCGCGCTGCTGCAAA
AAGCTAATTCGCATCGCTCGTCTTAGACTATGTACCTGGAAGACAGAACT
GTGCGCCTTCAACTTTGGGACACAGCTGGTCAAGAACGTTTCCGATCTTT
GATTCCTTCCTACATCCGTGACTCCAGTGTCGCTGTGGTGGTCTACGATA
TCTCCAACGCCAAGTCTTTCCAGAACACACGCAAATGGATCGACGATGTA
CGGGGAGAACGCGGTAACGATGTCATCATCGTCCTGGTGGGCAACAAGAC
CGATCTGAACGACAAGCGCGAGGTCACGACGGCGCAGGGCGAGGAGGAGG
CGAAGAAGAACGGCTTGATGTTCATTGAGACCAGTGCTAAAGTCGGCCAC
AATGTGAAGCAGCTTTTCAGGAGAATTGCGCAAGCCCTACCGGGCATGGA
GGGTGAAGCCAACCGGGGAGACAACCAGAGTCCGTTATCCTTTCCCCGCC
CATGGCTCGAATTACACGGGATGAGTACTGACAACTCTTACAGTGATCGA
TGTCAACATCACTCCGAAAGAGACCACGACCAACGACGGATGCGCCTGCT
AG
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Coding sequence (CDS) from alignment at ch3:3399462..3400413+

>KYF_004059-T1 ID=KYF_004059-T1|Name=KYF_004059-T1|organism=Aspergillus niger KYF3|type=CDS|length=3150bp|location=Sequence derived from alignment at ch3:3399462..3400413+ (Aspergillus niger KYF3)
ATGGCATCCACCTCCGGGGTAGGGTCGTATTCGAACCCTCTGAAGAAATT
CAAGCTGGTTTTCTTGGGCGAGCAGAGTGTTGGAAAAACCTCATTGATCA
CACGGTTCATGTACGATTCATTCGACAACACGTACCAAGCGACCATTGGA
ATCGATTTCTTGTCAAAGACTATGTACCTGGAAGACAGAACTGTGCGCCT
TCAACTTTGGGACACAGCTGGTCAAGAACGTTTCCGATCTTTGATTCCTT
CCTACATCCGTGACTCCAGTGTCGCTGTGGTGGTCTACGATATCTCCAAC
GCCAAGTCTTTCCAGAACACACGCAAATGGATCGACGATGTACGGGGAGA
ACGCGGTAACGATGTCATCATCGTCCTGGTGGGCAACAAGACCGATCTGA
ACGACAAGCGCGAGGTCACGACGGCGCAGGGCGAGGAGGAGGCGAAGAAG
AACGGCTTGATGTTCATTGAGACCAGTGCTAAAGTCGGCCACAATGTGAA
GCAGCTTTTCAGGAGAATTGCGCAAGCCCTACCGGGCATGGAGGGTGAAG
CCAACCGGGGAGACAACCAGATGATCGATGTCAACATCACTCCGAAAGAG
ACCACGACCAACGACGGATGCGCCTGCTAGATGGCATCCACCTCCGGGGT
AGGGTCGTATTCGAACCCTCTGAAGAAATTCAAGCTGGTTTTCTTGGGCG
AGCAGAGTGTTGGAAAAACCTCATTGATCACACGGTTCATGTACGATTCA
TTCGACAACACGTACCAAGCGACCATTGGAATCGATTTCTTGTCAAAGAC
TATGTACCTGGAAGACAGAACTGTGCGCCTTCAACTTTGGGACACAGCTG
GTCAAGAACGTTTCCGATCTTTGATTCCTTCCTACATCCGTGACTCCAGT
GTCGCTGTGGTGGTCTACGATATCTCCAACGCCAAGTCTTTCCAGAACAC
ACGCAAATGGATCGACGATGTACGGGGAGAACGCGGTAACGATGTCATCA
TCGTCCTGGTGGGCAACAAGACCGATCTGAACGACAAGCGCGAGGTCACG
ACGGCGCAGGGCGAGGAGGAGGCGAAGAAGAACGGCTTGATGTTCATTGA
GACCAGTGCTAAAGTCGGCCACAATGTGAAGCAGCTTTTCAGGAGAATTG
CGCAAGCCCTACCGGGCATGGAGGGTGAAGCCAACCGGGGAGACAACCAG
ATGATCGATGTCAACATCACTCCGAAAGAGACCACGACCAACGACGGATG
CGCCTGCTAGATGGCATCCACCTCCGGGGTAGGGTCGTATTCGAACCCTC
TGAAGAAATTCAAGCTGGTTTTCTTGGGCGAGCAGAGTGTTGGAAAAACC
TCATTGATCACACGGTTCATGTACGATTCATTCGACAACACGTACCAAGC
GACCATTGGAATCGATTTCTTGTCAAAGACTATGTACCTGGAAGACAGAA
CTGTGCGCCTTCAACTTTGGGACACAGCTGGTCAAGAACGTTTCCGATCT
TTGATTCCTTCCTACATCCGTGACTCCAGTGTCGCTGTGGTGGTCTACGA
TATCTCCAACGCCAAGTCTTTCCAGAACACACGCAAATGGATCGACGATG
TACGGGGAGAACGCGGTAACGATGTCATCATCGTCCTGGTGGGCAACAAG
ACCGATCTGAACGACAAGCGCGAGGTCACGACGGCGCAGGGCGAGGAGGA
GGCGAAGAAGAACGGCTTGATGTTCATTGAGACCAGTGCTAAAGTCGGCC
ACAATGTGAAGCAGCTTTTCAGGAGAATTGCGCAAGCCCTACCGGGCATG
GAGGGTGAAGCCAACCGGGGAGACAACCAGATGATCGATGTCAACATCAC
TCCGAAAGAGACCACGACCAACGACGGATGCGCCTGCTAGATGGCATCCA
CCTCCGGGGTAGGGTCGTATTCGAACCCTCTGAAGAAATTCAAGCTGGTT
TTCTTGGGCGAGCAGAGTGTTGGAAAAACCTCATTGATCACACGGTTCAT
GTACGATTCATTCGACAACACGTACCAAGCGACCATTGGAATCGATTTCT
TGTCAAAGACTATGTACCTGGAAGACAGAACTGTGCGCCTTCAACTTTGG
GACACAGCTGGTCAAGAACGTTTCCGATCTTTGATTCCTTCCTACATCCG
TGACTCCAGTGTCGCTGTGGTGGTCTACGATATCTCCAACGCCAAGTCTT
TCCAGAACACACGCAAATGGATCGACGATGTACGGGGAGAACGCGGTAAC
GATGTCATCATCGTCCTGGTGGGCAACAAGACCGATCTGAACGACAAGCG
CGAGGTCACGACGGCGCAGGGCGAGGAGGAGGCGAAGAAGAACGGCTTGA
TGTTCATTGAGACCAGTGCTAAAGTCGGCCACAATGTGAAGCAGCTTTTC
AGGAGAATTGCGCAAGCCCTACCGGGCATGGAGGGTGAAGCCAACCGGGG
AGACAACCAGATGATCGATGTCAACATCACTCCGAAAGAGACCACGACCA
ACGACGGATGCGCCTGCTAGATGGCATCCACCTCCGGGGTAGGGTCGTAT
TCGAACCCTCTGAAGAAATTCAAGCTGGTTTTCTTGGGCGAGCAGAGTGT
TGGAAAAACCTCATTGATCACACGGTTCATGTACGATTCATTCGACAACA
CGTACCAAGCGACCATTGGAATCGATTTCTTGTCAAAGACTATGTACCTG
GAAGACAGAACTGTGCGCCTTCAACTTTGGGACACAGCTGGTCAAGAACG
TTTCCGATCTTTGATTCCTTCCTACATCCGTGACTCCAGTGTCGCTGTGG
TGGTCTACGATATCTCCAACGCCAAGTCTTTCCAGAACACACGCAAATGG
ATCGACGATGTACGGGGAGAACGCGGTAACGATGTCATCATCGTCCTGGT
GGGCAACAAGACCGATCTGAACGACAAGCGCGAGGTCACGACGGCGCAGG
GCGAGGAGGAGGCGAAGAAGAACGGCTTGATGTTCATTGAGACCAGTGCT
AAAGTCGGCCACAATGTGAAGCAGCTTTTCAGGAGAATTGCGCAAGCCCT
ACCGGGCATGGAGGGTGAAGCCAACCGGGGAGACAACCAGATGATCGATG
TCAACATCACTCCGAAAGAGACCACGACCAACGACGGATGCGCCTGCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RAB6AKYF_004059Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_004059-T1KYF_004059-T1-proteinAspergillus niger KYF3polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_004059-T1.exon1KYF_004059-T1.exon1Aspergillus niger KYF3exon
KYF_004059-T1.exon2KYF_004059-T1.exon2Aspergillus niger KYF3exon
KYF_004059-T1.exon3KYF_004059-T1.exon3Aspergillus niger KYF3exon
KYF_004059-T1.exon4KYF_004059-T1.exon4Aspergillus niger KYF3exon
KYF_004059-T1.exon5KYF_004059-T1.exon5Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_004059-T1.cdsKYF_004059-T1.cdsAspergillus niger KYF3CDS


Properties
Property NameValue
NoteBUSCO:EOG09264JHE
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR001806
DBxrefInterPro:IPR005225
DBxrefPFAM:PF09439
DBxrefPFAM:PF08477
DBxrefPFAM:PF00071
DBxrefPFAM:PF01926
DBxrefPFAM:PF04670
DBxrefPFAM:PF00025
ProductRas- protein Rab-6A
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:3399462..3400413 +
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