You are here

Home

KYF_004156-T1, KYF_004156-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_004156-T1
Unique NameKYF_004156-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:3701549..3703138-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_004156-T1 ID=KYF_004156-T1|Name=KYF_004156-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1590bp|location=Sequence derived from alignment at ch3:3701549..3703138- (Aspergillus niger KYF3)
ATGGCAACACTGGCAGCCTCACCTCCATCCTCGCCTTCGTGGCCGAAAAG
ACGGCCGCGGGCCTGGGCTCTCCGCATTGAACGCTACTGCTGCACGGCAG
CATCATTCTTCCCTCTGGCATTTGTCTACAGCCTAACGACATGGGCCGTC
TGGGTCGAAGCCAGTGTTGGCTTCAAGCCGTCTGAAAGTGCTTGGATTGG
TGTGTGACTGTGGTCCCTCCGTCCCTTCATCCAACTGCTTACTGACCTGT
GATGTGAGCTAGGTATCCCAAGTTCCTTCCTCGGAATCATCCTCTATATC
TGCCTCAACGCATGCTACACGGTCGCCGTCTTCACCGATCCCGGATCCCC
CCTCACTCCCAGCGGCCGCGGTCGACATGAATATAGTGCACTTCCAGTGA
CCGAATTACCACAATATACCGCCTACACCGTGAGTTCGACCGGTGGATCC
CGATTCTGCAAGAAATGCCAGTGCCCGAAACCGGATCGGGCGCACCACTG
CTCGACATGCAAGCGCTGCGTGCTGAAGATGGATCACCACTGTCCGTGGC
TGGCGACCTGCGTCGGACTGTACAACTACAAAGCATTCCTGCTGTTCTTG
ATATATACGTCGATCTTCTGCTGGGTGGATTTCATCGTCGCGGCACTGTG
GATATGGACGGAGATGCTGGACGATAGTAAATATATCGATGTGGATAAAA
TGTTGCCGATCAACGTGGTGTTGCTGGCGGTGCTCGGTGGCATTATTGGC
CTGGTACTGTCGGGTTTCACCGTCTGGCATATCAGCCTGGCTTTGCGGGG
AATTACGACGATCGAATGCCTGGAGAAGACGCGGTATGTGTCACCGTTGC
GGAAAGCGCTGGATCGCCACCGCTACGAAAATGTGCTAGGCAGCGAAGGG
GGCGACCGAGAAGGATTCGGTCACCGGCTGCAGGACTACGGAGGGCAGAT
CCTCGACGCCCATGCGAATGCGATCCCAGGAGTGACGCGGGCGGAAGAGG
GTGAGGAACCAACGCCTCCACCCAGTGTGACACCATCCGGGATGCGGATG
TCACCAGCACAGCAGGCATTGTCGCGATCATATGCCGAGATGGAGCGCCA
GCGTGAGCACGACCGGTATCAGAACTATTTGGATGAGGAAGACAGCGAGA
AAATGCCGCACGCATTCGACCTGGGATGGCGGCGCAATCTACGACACTTG
TTCGGTGACCGCCCGCTGCTATGGCCGGTGCCGGTGTGTACGACAACAGG
CGATGGCTGGCACTGGGAGCCGAGTGCGAAGTTCATGGAGGCGCGCGATC
GCGTGCGGCAGCGACGGGAGCGGGAGGCGGCGGAGCAACAGCAATACCAG
CGGGATCTGTACCAGCGGAATATGAACAATGGCCATGCCTGGGGTGCATC
TGCTGCTGCAGCCAACTGGACGCCGAACCAGCCGCTGGATGTGGTGCGCG
ATCCGGAGCGGCCGAACACGGGGGTGTCGATGAAGACACTAGCGCCGATG
TCACCACGGCTGCGGGGGCAAGACAGCGAGGGAGAGATGAGCGAAGAGGA
GATGCACGAACGAGAAGATGAATGGCGGAGCTGGGATTGA
back to top

Coding sequence (CDS) from alignment at ch3:3701549..3703138-

>KYF_004156-T1 ID=KYF_004156-T1|Name=KYF_004156-T1|organism=Aspergillus niger KYF3|type=CDS|length=3054bp|location=Sequence derived from alignment at ch3:3701549..3703138- (Aspergillus niger KYF3)
GTATCCCAAGTTCCTTCCTCGGAATCATCCTCTATATCTGCCTCAACGCA
TGCTACACGGTCGCCGTCTTCACCGATCCCGGATCCCCCCTCACTCCCAG
CGGCCGCGGTCGACATGAATATAGTGCACTTCCAGTGACCGAATTACCAC
AATATACCGCCTACACCGTGAGTTCGACCGGTGGATCCCGATTCTGCAAG
AAATGCCAGTGCCCGAAACCGGATCGGGCGCACCACTGCTCGACATGCAA
GCGCTGCGTGCTGAAGATGGATCACCACTGTCCGTGGCTGGCGACCTGCG
TCGGACTGTACAACTACAAAGCATTCCTGCTGTTCTTGATATATACGTCG
ATCTTCTGCTGGGTGGATTTCATCGTCGCGGCACTGTGGATATGGACGGA
GATGCTGGACGATAGTAAATATATCGATGTGGATAAAATGTTGCCGATCA
ACGTGGTGTTGCTGGCGGTGCTCGGTGGCATTATTGGCCTGGTACTGTCG
GGTTTCACCGTCTGGCATATCAGCCTGGCTTTGCGGGGAATTACGACGAT
CGAATGCCTGGAGAAGACGCGGTATGTGTCACCGTTGCGGAAAGCGCTGG
ATCGCCACCGCTACGAAAATGTGCTAGGCAGCGAAGGGGGCGACCGAGAA
GGATTCGGTCACCGGCTGCAGGACTACGGAGGGCAGATCCTCGACGCCCA
TGCGAATGCGATCCCAGGAGTGACGCGGGCGGAAGAGGGTGAGGAACCAA
CGCCTCCACCCAGTGTGACACCATCCGGGATGCGGATGTCACCAGCACAG
CAGGCATTGTCGCGATCATATGCCGAGATGGAGCGCCAGCGTGAGCACGA
CCGGTATCAGAACTATTTGGATGAGGAAGACAGCGAGAAAATGCCGCACG
CATTCGACCTGGGATGGCGGCGCAATCTACGACACTTGTTCGGTGACCGC
CCGCTGCTATGGCCGGTGCCGGTGTGTACGACAACAGGCGATGGCTGGCA
CTGGGAGCCGAGTGCGAAGTTCATGGAGGCGCGCGATCGCGTGCGGCAGC
GACGGGAGCGGGAGGCGGCGGAGCAACAGCAATACCAGCGGGATCTGTAC
CAGCGGAATATGAACAATGGCCATGCCTGGGGTGCATCTGCTGCTGCAGC
CAACTGGACGCCGAACCAGCCGCTGGATGTGGTGCGCGATCCGGAGCGGC
CGAACACGGGGGTGTCGATGAAGACACTAGCGCCGATGTCACCACGGCTG
CGGGGGCAAGACAGCGAGGGAGAGATGAGCGAAGAGGAGATGCACGAACG
AGAAGATGAATGGCGGAGCTGGGATTGAATGGCAACACTGGCAGCCTCAC
CTCCATCCTCGCCTTCGTGGCCGAAAAGACGGCCGCGGGCCTGGGCTCTC
CGCATTGAACGCTACTGCTGCACGGCAGCATCATTCTTCCCTCTGGCATT
TGTCTACAGCCTAACGACATGGGCCGTCTGGGTCGAAGCCAGTGTTGGCT
TCAAGCCGTCTGAAAGTGCTTGGATTGGTATCCCAAGTTCCTTCCTCGGA
ATCATCCTCTATATCTGCCTCAACGCATGCTACACGGTCGCCGTCTTCAC
CGATCCCGGATCCCCCCTCACTCCCAGCGGCCGCGGTCGACATGAATATA
GTGCACTTCCAGTGACCGAATTACCACAATATACCGCCTACACCGTGAGT
TCGACCGGTGGATCCCGATTCTGCAAGAAATGCCAGTGCCCGAAACCGGA
TCGGGCGCACCACTGCTCGACATGCAAGCGCTGCGTGCTGAAGATGGATC
ACCACTGTCCGTGGCTGGCGACCTGCGTCGGACTGTACAACTACAAAGCA
TTCCTGCTGTTCTTGATATATACGTCGATCTTCTGCTGGGTGGATTTCAT
CGTCGCGGCACTGTGGATATGGACGGAGATGCTGGACGATAGTAAATATA
TCGATGTGGATAAAATGTTGCCGATCAACGTGGTGTTGCTGGCGGTGCTC
GGTGGCATTATTGGCCTGGTACTGTCGGGTTTCACCGTCTGGCATATCAG
CCTGGCTTTGCGGGGAATTACGACGATCGAATGCCTGGAGAAGACGCGGT
ATGTGTCACCGTTGCGGAAAGCGCTGGATCGCCACCGCTACGAAAATGTG
CTAGGCAGCGAAGGGGGCGACCGAGAAGGATTCGGTCACCGGCTGCAGGA
CTACGGAGGGCAGATCCTCGACGCCCATGCGAATGCGATCCCAGGAGTGA
CGCGGGCGGAAGAGGGTGAGGAACCAACGCCTCCACCCAGTGTGACACCA
TCCGGGATGCGGATGTCACCAGCACAGCAGGCATTGTCGCGATCATATGC
CGAGATGGAGCGCCAGCGTGAGCACGACCGGTATCAGAACTATTTGGATG
AGGAAGACAGCGAGAAAATGCCGCACGCATTCGACCTGGGATGGCGGCGC
AATCTACGACACTTGTTCGGTGACCGCCCGCTGCTATGGCCGGTGCCGGT
GTGTACGACAACAGGCGATGGCTGGCACTGGGAGCCGAGTGCGAAGTTCA
TGGAGGCGCGCGATCGCGTGCGGCAGCGACGGGAGCGGGAGGCGGCGGAG
CAACAGCAATACCAGCGGGATCTGTACCAGCGGAATATGAACAATGGCCA
TGCCTGGGGTGCATCTGCTGCTGCAGCCAACTGGACGCCGAACCAGCCGC
TGGATGTGGTGCGCGATCCGGAGCGGCCGAACACGGGGGTGTCGATGAAG
ACACTAGCGCCGATGTCACCACGGCTGCGGGGGCAAGACAGCGAGGGAGA
GATGAGCGAAGAGGAGATGCACGAACGAGAAGATGAATGGCGGAGCTGGG
ATTGAATGGCAACACTGGCAGCCTCACCTCCATCCTCGCCTTCGTGGCCG
AAAAGACGGCCGCGGGCCTGGGCTCTCCGCATTGAACGCTACTGCTGCAC
GGCAGCATCATTCTTCCCTCTGGCATTTGTCTACAGCCTAACGACATGGG
CCGTCTGGGTCGAAGCCAGTGTTGGCTTCAAGCCGTCTGAAAGTGCTTGG
ATTG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016409palmitoyltransferase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PFA3KYF_004156Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_004156-T1KYF_004156-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_004156-T1.cdsKYF_004156-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_004156-T1.exon2KYF_004156-T1.exon2Aspergillus niger KYF3exon
KYF_004156-T1.exon1KYF_004156-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
DBxrefInterPro:IPR001594
DBxrefPFAM:PF01529
Productpalmitoyltransferase for Vac8p
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:3701549..3703138 -
Powered by Drupal