You are here

Home

KYF_004178-T1, KYF_004178-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_004178-T1
Unique NameKYF_004178-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:3768957..3770021+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_004178-T1 ID=KYF_004178-T1|Name=KYF_004178-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1065bp|location=Sequence derived from alignment at ch3:3768957..3770021+ (Aspergillus niger KYF3)
ATGCCATCATTTGATCCCACAAATGTAAACTTAGACACTGCCAGCGTGGA
GGACATATACTGTTACCTGCAGTTGTCTGGAAATGACTACAATGGACACC
TGGGTGCACGTATCTCTGCGATATTCGTGATCCTGATAACATCATCAGCA
TCTACTCTTTTTCCGGTGGTAGCCAAGCGAATACCACGCTGGAATATCCC
ATACCCTGTCTATCTCTTCGCTCGATACTTCGGTACGGGTGTTATTGTCG
CAACCGCATTCATCCACCTATTGGACCCAGCGTATGGAAGCATCGGCAGC
ACAACCTGCGTGGGCGTATCGGAGCATTGGGCAGATTATTCCTGGTGTCC
TGCCATTGTTCTCGTGTCTGTGCTCATGGTGTTCCTGATGGACGTGGCTT
CCGAAGTATACGTCGAGCGCGTATATGGGGTGGAAAAAGAGCACGACGCG
ACCGACCGGTTTCTGACCCAAGCAAACTTAATCCAGAGCGACGACGAGAG
TACAGTCAATGATGATGCTGGTGGAATTAAGCAGCCTGGGATTCAAGATG
AAATTTGCTCAGTCGAATCCGAGCGCTCATTCCGCAAAGATATCGCTGCC
TTTCTTATTCTAGAGTTCGGCATTATCTTCCATTCGGTAATCATCGGACT
TAACCTGGGAGTGACTGGCGACGAGTTCACCACTCTGTACCCCGTGTTGG
TCTTCCATCAAGCGTTTGAAGGCCTTGGAATCGGCGCCCGAATGTCTGCG
CTTCGCTTTGGCCGACATTGGTGGCTGCCATGGGTTCTCTGCATGGCATA
CGGCCTCACAACGCCAATTTCGATTGCTATCGGCATAGGAGTACGCACAA
CGTATAACTCGGGATCTAGGACAGCCAACATTGTCCAGGGTGTATTGGAT
GCTGTCTCAGCCGGCATTCTGATCTACAGTGGATTAGTGGAATTGCTGGC
TCGCGACTTTCTGTTCGACCCAGACCGGGCTAAGCGGCGGTCGCATCTGC
TGGGAATGATCTTCTGCGTATTGCTGGGAGCCGGCATCATGGCACTTATT
GGGAAGTGGGCATGA
back to top

Coding sequence (CDS) from alignment at ch3:3768957..3770021+

>KYF_004178-T1 ID=KYF_004178-T1|Name=KYF_004178-T1|organism=Aspergillus niger KYF3|type=CDS|length=1065bp|location=Sequence derived from alignment at ch3:3768957..3770021+ (Aspergillus niger KYF3)
ATGCCATCATTTGATCCCACAAATGTAAACTTAGACACTGCCAGCGTGGA
GGACATATACTGTTACCTGCAGTTGTCTGGAAATGACTACAATGGACACC
TGGGTGCACGTATCTCTGCGATATTCGTGATCCTGATAACATCATCAGCA
TCTACTCTTTTTCCGGTGGTAGCCAAGCGAATACCACGCTGGAATATCCC
ATACCCTGTCTATCTCTTCGCTCGATACTTCGGTACGGGTGTTATTGTCG
CAACCGCATTCATCCACCTATTGGACCCAGCGTATGGAAGCATCGGCAGC
ACAACCTGCGTGGGCGTATCGGAGCATTGGGCAGATTATTCCTGGTGTCC
TGCCATTGTTCTCGTGTCTGTGCTCATGGTGTTCCTGATGGACGTGGCTT
CCGAAGTATACGTCGAGCGCGTATATGGGGTGGAAAAAGAGCACGACGCG
ACCGACCGGTTTCTGACCCAAGCAAACTTAATCCAGAGCGACGACGAGAG
TACAGTCAATGATGATGCTGGTGGAATTAAGCAGCCTGGGATTCAAGATG
AAATTTGCTCAGTCGAATCCGAGCGCTCATTCCGCAAAGATATCGCTGCC
TTTCTTATTCTAGAGTTCGGCATTATCTTCCATTCGGTAATCATCGGACT
TAACCTGGGAGTGACTGGCGACGAGTTCACCACTCTGTACCCCGTGTTGG
TCTTCCATCAAGCGTTTGAAGGCCTTGGAATCGGCGCCCGAATGTCTGCG
CTTCGCTTTGGCCGACATTGGTGGCTGCCATGGGTTCTCTGCATGGCATA
CGGCCTCACAACGCCAATTTCGATTGCTATCGGCATAGGAGTACGCACAA
CGTATAACTCGGGATCTAGGACAGCCAACATTGTCCAGGGTGTATTGGAT
GCTGTCTCAGCCGGCATTCTGATCTACAGTGGATTAGTGGAATTGCTGGC
TCGCGACTTTCTGTTCGACCCAGACCGGGCTAAGCGGCGGTCGCATCTGC
TGGGAATGATCTTCTGCGTATTGCTGGGAGCCGGCATCATGGCACTTATT
GGGAAGTGGGCATGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0030001metal ion transport
GO:0055085transmembrane transport
GO:0071577zinc ion transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0046873metal ion transmembrane transporter activity
GO:0005385zinc ion transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_004178KYF_004178Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_004178-T1.exon1KYF_004178-T1.exon1Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_004178-T1.cdsKYF_004178-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_004178-T1KYF_004178-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR003689
DBxrefInterPro:IPR004698
DBxrefPFAM:PF02535
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:3768957..3770021 +
Powered by Drupal