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KYF_004238-T1, KYF_004238-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_004238-T1
Unique NameKYF_004238-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:3930936..3932033+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_004238-T1 ID=KYF_004238-T1|Name=KYF_004238-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1098bp|location=Sequence derived from alignment at ch3:3930936..3932033+ (Aspergillus niger KYF3)
ATGGATGCAATGCACAACCTCGCAAACATCTACTTTTCCCAACACCAGTT
ACCCGCAGCAGAAGAGCTGTACGACCGAGCCTTTAAGGGCAAACAGAGAC
TGCTTGGTGAATATCACACATCAACGCTTGACACAATTCATAATTTAGGG
GTTGTTTATTTCGAACAAGGTCGACTGCAGGAAGCCGAAGAAATGTACGA
TCGTGCACTTTCTGGGAAGGTAAGAGTAATGGGGGAAGACCACGCGTCCG
TGTTCGACACGCTATTCCAATTAGGAACCCTGTATCGCTCACAGGGTAGA
TCGAAAGCTGCCGAGGAAATGTACCAACGAGCTCTGTTGGGACGAGAGAA
AGTCGTGGGTGTCTGTCACCCCTCGACTCTTCATACTATCCATCATATTG
GAAACCTTTATTTGCGGCAAGGCAGGCTGCAAGAGGCGGAGCAGATGCAA
GAACGAGCACTCCACGGCTATGACAGTACCTTTGGTCACGACCACACCTA
TACGCTTGAACTAGCCCATACCCTGGCTATTGTCTGTTGCCAACGAGGGA
AGCTTGCTAAAGCAGAAACCCTGTTCCAACGCGTCCTAGCCGCTAAGGAG
CAGACCGATGGGAAGCGTAGTGCGCCAGTGCTTGCTATTCTGAACAACCT
AGCAAACGTATACAGAGAGCAAGGCAGGCTCGTGGAAGCCGAAGAGACAT
ATAAATTGGTCTTGAGCGAATGGCAGAAACGCAGCCGAACCCATCCTGCG
GCACTCGGGGCTCTGAGCAATCTCGGGATCATCTATCAAGACCGGAACCA
GCTGAAAGAGGCGGAAAGAGTGTTCAAAGAATCTCTCAACGGATACAATA
GCGAGCTCGGTCCTGATCATGTCCTCACACTGGACACGGTATGTAACCTA
GGGGATTTGTATCGGGACTAGCACAAGGCCCACAGGGCAAAGGAACTCTA
CCAGCGCGCTCTTACCGGCTATGAGAGTATTCTGGGTCCAGACCACCCGA
GAACACAAGAAACCGCAAACAAGGTACGCTTGATATGCAATTCTTCAAAA
CCGACCAAGCGAGACCTCATTGCCCGACTTTGGAAAGGTGGTCGTTAA
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Coding sequence (CDS) from alignment at ch3:3930936..3932033+

>KYF_004238-T1 ID=KYF_004238-T1|Name=KYF_004238-T1|organism=Aspergillus niger KYF3|type=CDS|length=2088bp|location=Sequence derived from alignment at ch3:3930936..3932033+ (Aspergillus niger KYF3)
ATGGATGCAATGCACAACCTCGCAAACATCTACTTTTCCCAACACCAGTT
ACCCGCAGCAGAAGAGCTGTACGACCGAGCCTTTAAGGGCAAACAGAGAC
TGCTTGGTGAATATCACACATCAACGCTTGACACAATTCATAATTTAGGG
GTTGTTTATTTCGAACAAGGTCGACTGCAGGAAGCCGAAGAAATGTACGA
TCGTGCACTTTCTGGGAAGGTAAGAGTAATGGGGGAAGACCACGCGTCCG
TGTTCGACACGCTATTCCAATTAGGAACCCTGTATCGCTCACAGGGTAGA
TCGAAAGCTGCCGAGGAAATGTACCAACGAGCTCTGTTGGGACGAGAGAA
AGTCGTGGGTGTCTGTCACCCCTCGACTCTTCATACTATCCATCATATTG
GAAACCTTTATTTGCGGCAAGGCAGGCTGCAAGAGGCGGAGCAGATGCAA
GAACGAGCACTCCACGGCTATGACAGTACCTTTGGTCACGACCACACCTA
TACGCTTGAACTAGCCCATACCCTGGCTATTGTCTGTTGCCAACGAGGGA
AGCTTGCTAAAGCAGAAACCCTGTTCCAACGCGTCCTAGCCGCTAAGGAG
CAGACCGATGGGAAGCGTAGTGCGCCAGTGCTTGCTATTCTGAACAACCT
AGCAAACGTATACAGAGAGCAAGGCAGGCTCGTGGAAGCCGAAGAGACAT
ATAAATTGGTCTTGAGCGAATGGCAGAAACGCAGCCGAACCCATCCTGCG
GCACTCGGGGCTCTGAGCAATCTCGGGATCATCTATCAAGACCGGAACCA
GCTGAAAGAGGCGGAAAGAGTGTTCAAAGAATCTCTCAACGGATACAATA
GCGAGCTCGGTCCTGATCATGTCCTCACACTGGACACGGAACTCTACCAG
CGCGCTCTTACCGGCTATGAGAGTATTCTGGGTCCAGACCACCCGAGAAC
ACAAGAAACCGCAAACAAGGTACGCTTGATATGCAATTCTTCAAAACCGA
CCAAGCGAGACCTCATTGCCCGACTTTGGAAAGGTGGTCGTTAAATGGAT
GCAATGCACAACCTCGCAAACATCTACTTTTCCCAACACCAGTTACCCGC
AGCAGAAGAGCTGTACGACCGAGCCTTTAAGGGCAAACAGAGACTGCTTG
GTGAATATCACACATCAACGCTTGACACAATTCATAATTTAGGGGTTGTT
TATTTCGAACAAGGTCGACTGCAGGAAGCCGAAGAAATGTACGATCGTGC
ACTTTCTGGGAAGGTAAGAGTAATGGGGGAAGACCACGCGTCCGTGTTCG
ACACGCTATTCCAATTAGGAACCCTGTATCGCTCACAGGGTAGATCGAAA
GCTGCCGAGGAAATGTACCAACGAGCTCTGTTGGGACGAGAGAAAGTCGT
GGGTGTCTGTCACCCCTCGACTCTTCATACTATCCATCATATTGGAAACC
TTTATTTGCGGCAAGGCAGGCTGCAAGAGGCGGAGCAGATGCAAGAACGA
GCACTCCACGGCTATGACAGTACCTTTGGTCACGACCACACCTATACGCT
TGAACTAGCCCATACCCTGGCTATTGTCTGTTGCCAACGAGGGAAGCTTG
CTAAAGCAGAAACCCTGTTCCAACGCGTCCTAGCCGCTAAGGAGCAGACC
GATGGGAAGCGTAGTGCGCCAGTGCTTGCTATTCTGAACAACCTAGCAAA
CGTATACAGAGAGCAAGGCAGGCTCGTGGAAGCCGAAGAGACATATAAAT
TGGTCTTGAGCGAATGGCAGAAACGCAGCCGAACCCATCCTGCGGCACTC
GGGGCTCTGAGCAATCTCGGGATCATCTATCAAGACCGGAACCAGCTGAA
AGAGGCGGAAAGAGTGTTCAAAGAATCTCTCAACGGATACAATAGCGAGC
TCGGTCCTGATCATGTCCTCACACTGGACACGGAACTCTACCAGCGCGCT
CTTACCGGCTATGAGAGTATTCTGGGTCCAGACCACCCGAGAACACAAGA
AACCGCAAACAAGGTACGCTTGATATGCAATTCTTCAAAACCGACCAAGC
GAGACCTCATTGCCCGACTTTGGAAAGGTGGTCGTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_004238KYF_004238Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_004238-T1.exon1KYF_004238-T1.exon1Aspergillus niger KYF3exon
KYF_004238-T1.exon2KYF_004238-T1.exon2Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_004238-T1.cdsKYF_004238-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_004238-T1KYF_004238-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR013026
DBxrefInterPro:IPR011990
DBxrefInterPro:IPR019734
DBxrefPFAM:PF13181
DBxrefPFAM:PF13176
DBxrefPFAM:PF13174
DBxrefPFAM:PF07721
DBxrefPFAM:PF07720
DBxrefPFAM:PF13432
DBxrefPFAM:PF13424
DBxrefPFAM:PF13374
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:3930936..3932033 +
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