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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:153020..154273- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_004309-T1 ID=KYF_004309-T1|Name=KYF_004309-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1254bp|location=Sequence derived from alignment at ch4:153020..154273- (Aspergillus niger KYF3)
ATGCCTAACACCCGTCCCCTTGTCCGTGCGGCATGCCATAATCTCTCCGG
CATGCGCCATGCTTCTACTAGCGCCACGAAAAAGGCTGGCCCCCTCGCCG
GCATCACTGTCGTCAGTCTGGAACAAGCCATAGCCGCTCCCTTCTGTACC
CGCCAACTAGCCGACCTAGGAGCCCGAGTCATCAAAGTCGAACGACCTGG
CGTCGGAGACTTTGCTCGCAATTATGACACCCGCGTTAACGGCCTAGCCT
CCCACTTCGTCTGGACCAACCGGTCTAAAGAGAGTCTCGCCTTGGACCTC
AAAAAGCCGTCCGATCACAGCGTGCTCATGCGCCTGCTCGGCCGCGCCGA
TGTCCTCGTCCAGAACCTCGCTCCCGGCGCCAGTGCTCGACTGGGTTTAT
CCTACGATGATCTCAAAGCGGCTCATCCATCCTTGATTGTGTGCAACATC
TCCGGGTATGGTCCTGACGGACCGTACCGCGATAAGAAGGCCTACGATCT
GTTGATCCAGAGCGAGGCTGGCATGCTCTCCGTCACGGGGACGGGAAAAG
AGCCCGCCAAGGTGGGCATCTCCATCGCTGATATTTCCGCTGGTAGCTAT
GCCTACTCCAATATCCTGGCGGCGTTGTATCAGCGGGAGAGGGATCCCTC
GAAGCGGGGGTGTAACATTGATATCTCCATGTTGGAGAGCATGGTTGAGT
GGATGGGCTTCCCTATGTATTATACTTATGAGAATGCCCCGGGCCCGACA
CCAGCGGGTGCTTCGCATGCGGCTATCTATCCTTATGGCCCGTTTGAGAC
GGGAGATGGAACGGTGATGTTGGGGATCCAGAATGAGCGTGAGTGGGCTA
AGTTCTGTGACATCGTCTTGGGTCAACCCAGTCTTGCTACGAATGAGCGG
TTTGTGAATAACTCGCTGCGCTCGCAGAACCGTGATGAGTTGAAGAAGAT
AATCTGTGACGTCTTCTCGTCGCTTTCGGCGGAGCAGGTGATTGCTCGAC
TGGATGCAGCGGCGATTGCTAATGCCAGCGTCAATGATATGCAAGGCGTC
TGGAACCACCCACAGCTCAAGGCTCGGCAGCGATGGACAGATGTTAAGAC
GCCCGCAGGAAGTGTGCCGGCTCTGCTACCTCCTGGAATGACCATGGGGG
ATGAGGATACTTATGGGGCGCGCATGGACGCTGTCCCTGATGTGGGTGAG
CATAACAAGGCTATTCTGGCCGAGTTGGGGCTCGACGAGGGTACGGAGAA
ATAG back to topCoding sequence (CDS) from alignment at ch4:153020..154273- >KYF_004309-T1 ID=KYF_004309-T1|Name=KYF_004309-T1|organism=Aspergillus niger KYF3|type=CDS|length=1254bp|location=Sequence derived from alignment at ch4:153020..154273- (Aspergillus niger KYF3)
ATGCCTAACACCCGTCCCCTTGTCCGTGCGGCATGCCATAATCTCTCCGG
CATGCGCCATGCTTCTACTAGCGCCACGAAAAAGGCTGGCCCCCTCGCCG
GCATCACTGTCGTCAGTCTGGAACAAGCCATAGCCGCTCCCTTCTGTACC
CGCCAACTAGCCGACCTAGGAGCCCGAGTCATCAAAGTCGAACGACCTGG
CGTCGGAGACTTTGCTCGCAATTATGACACCCGCGTTAACGGCCTAGCCT
CCCACTTCGTCTGGACCAACCGGTCTAAAGAGAGTCTCGCCTTGGACCTC
AAAAAGCCGTCCGATCACAGCGTGCTCATGCGCCTGCTCGGCCGCGCCGA
TGTCCTCGTCCAGAACCTCGCTCCCGGCGCCAGTGCTCGACTGGGTTTAT
CCTACGATGATCTCAAAGCGGCTCATCCATCCTTGATTGTGTGCAACATC
TCCGGGTATGGTCCTGACGGACCGTACCGCGATAAGAAGGCCTACGATCT
GTTGATCCAGAGCGAGGCTGGCATGCTCTCCGTCACGGGGACGGGAAAAG
AGCCCGCCAAGGTGGGCATCTCCATCGCTGATATTTCCGCTGGTAGCTAT
GCCTACTCCAATATCCTGGCGGCGTTGTATCAGCGGGAGAGGGATCCCTC
GAAGCGGGGGTGTAACATTGATATCTCCATGTTGGAGAGCATGGTTGAGT
GGATGGGCTTCCCTATGTATTATACTTATGAGAATGCCCCGGGCCCGACA
CCAGCGGGTGCTTCGCATGCGGCTATCTATCCTTATGGCCCGTTTGAGAC
GGGAGATGGAACGGTGATGTTGGGGATCCAGAATGAGCGTGAGTGGGCTA
AGTTCTGTGACATCGTCTTGGGTCAACCCAGTCTTGCTACGAATGAGCGG
TTTGTGAATAACTCGCTGCGCTCGCAGAACCGTGATGAGTTGAAGAAGAT
AATCTGTGACGTCTTCTCGTCGCTTTCGGCGGAGCAGGTGATTGCTCGAC
TGGATGCAGCGGCGATTGCTAATGCCAGCGTCAATGATATGCAAGGCGTC
TGGAACCACCCACAGCTCAAGGCTCGGCAGCGATGGACAGATGTTAAGAC
GCCCGCAGGAAGTGTGCCGGCTCTGCTACCTCCTGGAATGACCATGGGGG
ATGAGGATACTTATGGGGCGCGCATGGACGCTGTCCCTGATGTGGGTGAG
CATAACAAGGCTATTCTGGCCGAGTTGGGGCTCGACGAGGGTACGGAGAA
ATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008410 | CoA-transferase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_4.3 |
| Note | EggNog:ENOG41 |
| Note | SMCOG1189:L-carnitine dehydratase/bile acid-inducible |
| DBxref | InterPro:IPR003673 |
| DBxref | InterPro:IPR023606 |
| DBxref | PFAM:PF02515 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:153020..154273 - |
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