You are here

Home

KYF_004354-T1, KYF_004354-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_004354-T1
Unique NameKYF_004354-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:270937..272161-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_004354-T1 ID=KYF_004354-T1|Name=KYF_004354-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1225bp|location=Sequence derived from alignment at ch4:270937..272161- (Aspergillus niger KYF3)
ATGGCTCCTTCAGGAATCAATCAGGTCCGTTTCTTTATTATATCTGCACA
TAGACTCGCTTACTGACATCCTCGGTCGGTGTCTGTACAGGCTTTCGTTT
TACACCCCGGGGGCAGATTCGATTATGAAGAGCGTGTTATACCTAATCTT
CAGACGGACCGCGACGTCATCGTCCAGGTTATCGTGACTGGCCTTTGTGG
CTCCGATGTAAGGCTTTACTTCCATTCATCGTTTTCCTTTCAGCTTGGGC
CACAGCTTACCATCGACCTAGATCCACTATTGGCAGCATGGCCGCATAGG
GCGGTATGTGGTCGAAGCCCCCATTGTCCTTGGCCACGAATCCGCCGGCA
TTGTGGTGGAATGCGGGAGTAAATCGGGTTTTGCTATCGGTGATCGCGTA
GCCCTGGAGCCGGGCATTGCCTGCAATACCTGCCATCATTGCCGCGCGGG
GAGATATAACCTCTGTAGCGCGATGCGTTTTGCTGCCACACCACCCTATG
ATGGGACACTGGCGACCTACTACCGTCTTCCTGCAGAATGCTGCTACAAG
CTGCCAGCACATGTATCCCTGCAACACGGAGCACTGGTCGAACCTCTCAG
TGTGGCAGTGCACAGCTGTCGACTGGCAGGGGATATGCAGCAAAAGTCGG
TCGTCGTCTTTGGCGCTGGCCCAGTCGGTTTGCTCTGCGCATCCGTTTCC
CGCGCATTCGGCGCATCGACAGTTGTGGTTGTTGACATTAACTCCGACCG
ACTTAGCGTGGCACAAAAGTACGGAGCCACGCACACATATAAAATGAGCA
ACGAATCCCCGGAACACAATGCTGCCAGAATTTTGGAAGAAATGGAGCTG
GACAATGGGGCCCACATTGTTTTGGATGCCACCGGCGCCGAGCCTTGTAT
GAACTGTGGCATTTCAGTTCTTGCGTCGGGTGGAACATTTGTGCAAGTCG
GCTTGGGCAAACCGAATCCCTCACTGCCGGTCGGTCAAATCTGTGATAAA
GAGGCCATTTTCAGGGGGAGTTTTCGATATGGTCCAGGAGATTATCGAAC
AGCAATTGGGCTGCTGTCGTCGGGTCGGGTTGTTTTAGAGGGTTTAGTTA
CCCACGAGTTCCCTTTCACGCAGGCGGAAGAGGCATTCAAGAACGTCGGC
AACCGACAGGGTATCAAGACTGTCATCTATGGACCTGGGGCAGATGAAAA
CGCAGCGAAAGCAACCTTGACCTAA
back to top

Coding sequence (CDS) from alignment at ch4:270937..272161-

>KYF_004354-T1 ID=KYF_004354-T1|Name=KYF_004354-T1|organism=Aspergillus niger KYF3|type=CDS|length=3285bp|location=Sequence derived from alignment at ch4:270937..272161- (Aspergillus niger KYF3)
ATCCACTATTGGCAGCATGGCCGCATAGGGCGGTATGTGGTCGAAGCCCC
CATTGTCCTTGGCCACGAATCCGCCGGCATTGTGGTGGAATGCGGGAGTA
AATCGGGTTTTGCTATCGGTGATCGCGTAGCCCTGGAGCCGGGCATTGCC
TGCAATACCTGCCATCATTGCCGCGCGGGGAGATATAACCTCTGTAGCGC
GATGCGTTTTGCTGCCACACCACCCTATGATGGGACACTGGCGACCTACT
ACCGTCTTCCTGCAGAATGCTGCTACAAGCTGCCAGCACATGTATCCCTG
CAACACGGAGCACTGGTCGAACCTCTCAGTGTGGCAGTGCACAGCTGTCG
ACTGGCAGGGGATATGCAGCAAAAGTCGGTCGTCGTCTTTGGCGCTGGCC
CAGTCGGTTTGCTCTGCGCATCCGTTTCCCGCGCATTCGGCGCATCGACA
GTTGTGGTTGTTGACATTAACTCCGACCGACTTAGCGTGGCACAAAAGTA
CGGAGCCACGCACACATATAAAATGAGCAACGAATCCCCGGAACACAATG
CTGCCAGAATTTTGGAAGAAATGGAGCTGGACAATGGGGCCCACATTGTT
TTGGATGCCACCGGCGCCGAGCCTTGTATGAACTGTGGCATTTCAGTTCT
TGCGTCGGGTGGAACATTTGTGCAAGTCGGCTTGGGCAAACCGAATCCCT
CACTGCCGGTCGGTCAAATCTGTGATAAAGAGGCCATTTTCAGGGGGAGT
TTTCGATATGGTCCAGGAGATTATCGAACAGCAATTGGGCTGCTGTCGTC
GGGTCGGGTTGTTTTAGAGGGTTTAGTTACCCACGAGTTCCCTTTCACGC
AGGCGGAAGAGGCATTCAAGAACGTCGGCAACCGACAGGGTATCAAGACT
GTCATCTATGGACCTGGGGCAGATGAAAACGCAGCGAAAGCAACCTTGAC
CTAAGCTTTCGTTTTACACCCCGGGGGCAGATTCGATTATGAAGAGCGTG
TTATACCTAATCTTCAGACGGACCGCGACGTCATCGTCCAGGTTATCGTG
ACTGGCCTTTGTGGCTCCGATATGGCTCCTTCAGGAATCAATCAGATCCA
CTATTGGCAGCATGGCCGCATAGGGCGGTATGTGGTCGAAGCCCCCATTG
TCCTTGGCCACGAATCCGCCGGCATTGTGGTGGAATGCGGGAGTAAATCG
GGTTTTGCTATCGGTGATCGCGTAGCCCTGGAGCCGGGCATTGCCTGCAA
TACCTGCCATCATTGCCGCGCGGGGAGATATAACCTCTGTAGCGCGATGC
GTTTTGCTGCCACACCACCCTATGATGGGACACTGGCGACCTACTACCGT
CTTCCTGCAGAATGCTGCTACAAGCTGCCAGCACATGTATCCCTGCAACA
CGGAGCACTGGTCGAACCTCTCAGTGTGGCAGTGCACAGCTGTCGACTGG
CAGGGGATATGCAGCAAAAGTCGGTCGTCGTCTTTGGCGCTGGCCCAGTC
GGTTTGCTCTGCGCATCCGTTTCCCGCGCATTCGGCGCATCGACAGTTGT
GGTTGTTGACATTAACTCCGACCGACTTAGCGTGGCACAAAAGTACGGAG
CCACGCACACATATAAAATGAGCAACGAATCCCCGGAACACAATGCTGCC
AGAATTTTGGAAGAAATGGAGCTGGACAATGGGGCCCACATTGTTTTGGA
TGCCACCGGCGCCGAGCCTTGTATGAACTGTGGCATTTCAGTTCTTGCGT
CGGGTGGAACATTTGTGCAAGTCGGCTTGGGCAAACCGAATCCCTCACTG
CCGGTCGGTCAAATCTGTGATAAAGAGGCCATTTTCAGGGGGAGTTTTCG
ATATGGTCCAGGAGATTATCGAACAGCAATTGGGCTGCTGTCGTCGGGTC
GGGTTGTTTTAGAGGGTTTAGTTACCCACGAGTTCCCTTTCACGCAGGCG
GAAGAGGCATTCAAGAACGTCGGCAACCGACAGGGTATCAAGACTGTCAT
CTATGGACCTGGGGCAGATGAAAACGCAGCGAAAGCAACCTTGACCTAAG
CTTTCGTTTTACACCCCGGGGGCAGATTCGATTATGAAGAGCGTGTTATA
CCTAATCTTCAGACGGACCGCGACGTCATCGTCCAGGTTATCGTGACTGG
CCTTTGTGGCTCCGATATGGCTCCTTCAGGAATCAATCAGATCCACTATT
GGCAGCATGGCCGCATAGGGCGGTATGTGGTCGAAGCCCCCATTGTCCTT
GGCCACGAATCCGCCGGCATTGTGGTGGAATGCGGGAGTAAATCGGGTTT
TGCTATCGGTGATCGCGTAGCCCTGGAGCCGGGCATTGCCTGCAATACCT
GCCATCATTGCCGCGCGGGGAGATATAACCTCTGTAGCGCGATGCGTTTT
GCTGCCACACCACCCTATGATGGGACACTGGCGACCTACTACCGTCTTCC
TGCAGAATGCTGCTACAAGCTGCCAGCACATGTATCCCTGCAACACGGAG
CACTGGTCGAACCTCTCAGTGTGGCAGTGCACAGCTGTCGACTGGCAGGG
GATATGCAGCAAAAGTCGGTCGTCGTCTTTGGCGCTGGCCCAGTCGGTTT
GCTCTGCGCATCCGTTTCCCGCGCATTCGGCGCATCGACAGTTGTGGTTG
TTGACATTAACTCCGACCGACTTAGCGTGGCACAAAAGTACGGAGCCACG
CACACATATAAAATGAGCAACGAATCCCCGGAACACAATGCTGCCAGAAT
TTTGGAAGAAATGGAGCTGGACAATGGGGCCCACATTGTTTTGGATGCCA
CCGGCGCCGAGCCTTGTATGAACTGTGGCATTTCAGTTCTTGCGTCGGGT
GGAACATTTGTGCAAGTCGGCTTGGGCAAACCGAATCCCTCACTGCCGGT
CGGTCAAATCTGTGATAAAGAGGCCATTTTCAGGGGGAGTTTTCGATATG
GTCCAGGAGATTATCGAACAGCAATTGGGCTGCTGTCGTCGGGTCGGGTT
GTTTTAGAGGGTTTAGTTACCCACGAGTTCCCTTTCACGCAGGCGGAAGA
GGCATTCAAGAACGTCGGCAACCGACAGGGTATCAAGACTGTCATCTATG
GACCTGGGGCAGATGAAAACGCAGCGAAAGCAACCTTGACCTAAGCTTTC
GTTTTACACCCCGGGGGCAGATTCGATTATGAAGAGCGTGTTATACCTAA
TCTTCAGACGGACCGCGACGTCATCGTCCAGGTTATCGTGACTGGCCTTT
GTGGCTCCGATATGGCTCCTTCAGGAATCAATCAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_004354KYF_004354Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_004354-T1KYF_004354-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_004354-T1.cdsKYF_004354-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_004354-T1.exon3KYF_004354-T1.exon3Aspergillus niger KYF3exon
KYF_004354-T1.exon2KYF_004354-T1.exon2Aspergillus niger KYF3exon
KYF_004354-T1.exon1KYF_004354-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
DBxrefInterPro:IPR011032
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002328
DBxrefInterPro:IPR013149
DBxrefInterPro:IPR013154
DBxrefInterPro:IPR020843
DBxrefPFAM:PF16912
DBxrefPFAM:PF00107
DBxrefPFAM:PF08240
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:270937..272161 -
Powered by Drupal