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KYF_004376-T1, KYF_004376-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_004376-T1
Unique NameKYF_004376-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:320707..321122-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_004376-T1 ID=KYF_004376-T1|Name=KYF_004376-T1|organism=Aspergillus niger KYF3|type=mRNA|length=416bp|location=Sequence derived from alignment at ch4:320707..321122- (Aspergillus niger KYF3)
ATGACCGGTCGTGGAGGCGGTGGAGCCGCTCGCAAGACCCTGCTTGCGCC
GATTCATTTCATCTTCAAGCTCCTTCAGCAACGGTCTACAGTCTCTATCT
GGCTTTACGAGCAGCTTGCTTTCCGCATAGAGGGAAAAATCAGGGTAAAT
GGATTTCTGGCGACTTGGTTGCGTGACATTTGACTAATCGACTCGTGTAG
GGTTTTGACGAGTTCATGAACCTTGTCATTGACGATGCAGTGGAGGTTCG
CATGGCTACAAAGTCCGAAGAAGAGAAGCGGAGACCTCTAGGTATGCGGC
AGTTCAAGCTCTTGTTCATTCCCCTGGGCGCTGCAATGCTGATTATATTC
TTGAACAACCTAGGCCAAATACTGCTCAAGGGCGATAACGTGTCTCTTAT
TCAAGCCGTGCAGTGA
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Coding sequence (CDS) from alignment at ch4:320707..321122-

>KYF_004376-T1 ID=KYF_004376-T1|Name=KYF_004376-T1|organism=Aspergillus niger KYF3|type=CDS|length=864bp|location=Sequence derived from alignment at ch4:320707..321122- (Aspergillus niger KYF3)
GCCAAATACTGCTCAAGGGCGATAACGTGTCTCTTATTCAAGCCGTGCAG
TGAGGTTTTGACGAGTTCATGAACCTTGTCATTGACGATGCAGTGGAGGT
TCGCATGGCTACAAAGTCCGAAGAAGAGAAGCGGAGACCTCTAGATGACC
GGTCGTGGAGGCGGTGGAGCCGCTCGCAAGACCCTGCTTGCGCCGATTCA
TTTCATCTTCAAGCTCCTTCAGCAACGGTCTACAGTCTCTATCTGGCTTT
ACGAGCAGCTTGCTTTCCGCATAGAGGGAAAAATCAGGGCCAAATACTGC
TCAAGGGCGATAACGTGTCTCTTATTCAAGCCGTGCAGTGAGGTTTTGAC
GAGTTCATGAACCTTGTCATTGACGATGCAGTGGAGGTTCGCATGGCTAC
AAAGTCCGAAGAAGAGAAGCGGAGACCTCTAGATGACCGGTCGTGGAGGC
GGTGGAGCCGCTCGCAAGACCCTGCTTGCGCCGATTCATTTCATCTTCAA
GCTCCTTCAGCAACGGTCTACAGTCTCTATCTGGCTTTACGAGCAGCTTG
CTTTCCGCATAGAGGGAAAAATCAGGGCCAAATACTGCTCAAGGGCGATA
ACGTGTCTCTTATTCAAGCCGTGCAGTGAGGTTTTGACGAGTTCATGAAC
CTTGTCATTGACGATGCAGTGGAGGTTCGCATGGCTACAAAGTCCGAAGA
AGAGAAGCGGAGACCTCTAGATGACCGGTCGTGGAGGCGGTGGAGCCGCT
CGCAAGACCCTGCTTGCGCCGATTCATTTCATCTTCAAGCTCCTTCAGCA
ACGGTCTACAGTCTCTATCTGGCTTTACGAGCAGCTTGCTTTCCGCATAG
AGGGAAAAATCAGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005681spliceosomal complex
Vocabulary: Biological Process
TermDefinition
GO:0000398mRNA splicing, via spliceosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_004376KYF_004376Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_004376-T1KYF_004376-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_004376-T1.cdsKYF_004376-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_004376-T1.exon3KYF_004376-T1.exon3Aspergillus niger KYF3exon
KYF_004376-T1.exon2KYF_004376-T1.exon2Aspergillus niger KYF3exon
KYF_004376-T1.exon1KYF_004376-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
NoteBUSCO:EOG09265NHW
DBxrefInterPro:IPR010920
DBxrefInterPro:IPR027078
DBxrefInterPro:IPR001163
DBxrefPFAM:PF01423
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:320707..321122 -
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