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KYF_004405-T1, KYF_004405-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_004405-T1
Unique NameKYF_004405-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:412341..413405-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_004405-T1 ID=KYF_004405-T1|Name=KYF_004405-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1065bp|location=Sequence derived from alignment at ch4:412341..413405- (Aspergillus niger KYF3)
ATGGCTGATCGCTACTCCTTCTCTCTGACCACGTTCTCCCCCAGGTAAGA
GAAGCTCACTGCTCGATAGCTCGGGTCCTTGCTAACATTGCTCAGCGGAA
AGCTGGTTCAGATTGGTAAATAATCGCTGCCACTGCCTGCAGCCTAAACA
TTTGTGCTGACGAGTCTTAGAATATGCCTTGAACGCTGTTAACCAGGGTG
TAACTGCTCTGGGCATCAAAGGTATGACATAGCTCTGACCCGCTCGAGCT
AGCTTCGAATAGCTACTGATGACCAACCCTACTCAATAGCTACCAACGGA
ATTGTTCTTGCAACCGAAAAGAAAGCGAACTCGCCTCTCATTGACCCACC
TTCCCTCTCCAAGATCTCCCTGATTACGCCCGACATCGGCATGGTCTACG
CAGGAATGGGTCCCGATTACCGTGTGCTCGTGGATCGGGCCCGCAAGGTT
TCTCACACTGGCTACAAGCGCATTTACAACGAATACCCCCCTACCCGGAT
ATTAGTGCAGGACGTTGCCCGGGTTGTCCAAGAAGCGACTCAGTCCGGTG
GTGTCCGACCGTACGGTGTCAGCTTGTTGATTGCTGGCTGGGACGAGGGC
GTTGAACCTGAATCGGGAGAGGCTCAGCGGGGTGACGGTGAGGACGAGCC
TAAGAAAGCAACCGGCAAGACGGGTGGTATCTTGAAGGGCGGCCCCAGTC
TGTACCAAGTCGACCCCAGTGGCAGTTACTATCCGTGGAAGGCTACGGCC
ATTGGAAGGCACGCGACGAGCGCAAAGACATTCCTTGAGAAACGTTACAC
CGAAGGTCTCGAGCTGGAAGATGCCATTCACATCGCTCTTCTAACTTTGA
AGGAGACTATCGAGGGAGAGATGAACGGTGATACGATAGAAATTGGTGAG
TTTCACATCTGGCAGTTCCTGATAGCTGTCGTGCTGACGATTATAGGCAT
TGTTGGTCCTCCTGCCGATCACCTGCTTGGTTATGAGGGCGTCGAAGGAT
CGCGCGGACCCCGCTTCAGGAAGCTGAGTAAGGAGGAGATTGAGGACTAT
CTCACCAACCTATGA
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Coding sequence (CDS) from alignment at ch4:412341..413405-

>KYF_004405-T1 ID=KYF_004405-T1|Name=KYF_004405-T1|organism=Aspergillus niger KYF3|type=CDS|length=4200bp|location=Sequence derived from alignment at ch4:412341..413405- (Aspergillus niger KYF3)
GCATTGTTGGTCCTCCTGCCGATCACCTGCTTGGTTATGAGGGCGTCGAA
GGATCGCGCGGACCCCGCTTCAGGAAGCTGAGTAAGGAGGAGATTGAGGA
CTATCTCACCAACCTATGACTACCAACGGAATTGTTCTTGCAACCGAAAA
GAAAGCGAACTCGCCTCTCATTGACCCACCTTCCCTCTCCAAGATCTCCC
TGATTACGCCCGACATCGGCATGGTCTACGCAGGAATGGGTCCCGATTAC
CGTGTGCTCGTGGATCGGGCCCGCAAGGTTTCTCACACTGGCTACAAGCG
CATTTACAACGAATACCCCCCTACCCGGATATTAGTGCAGGACGTTGCCC
GGGTTGTCCAAGAAGCGACTCAGTCCGGTGGTGTCCGACCGTACGGTGTC
AGCTTGTTGATTGCTGGCTGGGACGAGGGCGTTGAACCTGAATCGGGAGA
GGCTCAGCGGGGTGACGGTGAGGACGAGCCTAAGAAAGCAACCGGCAAGA
CGGGTGGTATCTTGAAGGGCGGCCCCAGTCTGTACCAAGTCGACCCCAGT
GGCAGTTACTATCCGTGGAAGGCTACGGCCATTGGAAGGCACGCGACGAG
CGCAAAGACATTCCTTGAGAAACGTTACACCGAAGGTCTCGAGCTGGAAG
ATGCCATTCACATCGCTCTTCTAACTTTGAAGGAGACTATCGAGGGAGAG
ATGAACGGTGATACGATAGAAATTGAATATGCCTTGAACGCTGTTAACCA
GGGTGTAACTGCTCTGGGCATCAAAGCGGAAAGCTGGTTCAGATTGATGG
CTGATCGCTACTCCTTCTCTCTGACCACGTTCTCCCCCAGGCATTGTTGG
TCCTCCTGCCGATCACCTGCTTGGTTATGAGGGCGTCGAAGGATCGCGCG
GACCCCGCTTCAGGAAGCTGAGTAAGGAGGAGATTGAGGACTATCTCACC
AACCTATGACTACCAACGGAATTGTTCTTGCAACCGAAAAGAAAGCGAAC
TCGCCTCTCATTGACCCACCTTCCCTCTCCAAGATCTCCCTGATTACGCC
CGACATCGGCATGGTCTACGCAGGAATGGGTCCCGATTACCGTGTGCTCG
TGGATCGGGCCCGCAAGGTTTCTCACACTGGCTACAAGCGCATTTACAAC
GAATACCCCCCTACCCGGATATTAGTGCAGGACGTTGCCCGGGTTGTCCA
AGAAGCGACTCAGTCCGGTGGTGTCCGACCGTACGGTGTCAGCTTGTTGA
TTGCTGGCTGGGACGAGGGCGTTGAACCTGAATCGGGAGAGGCTCAGCGG
GGTGACGGTGAGGACGAGCCTAAGAAAGCAACCGGCAAGACGGGTGGTAT
CTTGAAGGGCGGCCCCAGTCTGTACCAAGTCGACCCCAGTGGCAGTTACT
ATCCGTGGAAGGCTACGGCCATTGGAAGGCACGCGACGAGCGCAAAGACA
TTCCTTGAGAAACGTTACACCGAAGGTCTCGAGCTGGAAGATGCCATTCA
CATCGCTCTTCTAACTTTGAAGGAGACTATCGAGGGAGAGATGAACGGTG
ATACGATAGAAATTGAATATGCCTTGAACGCTGTTAACCAGGGTGTAACT
GCTCTGGGCATCAAAGCGGAAAGCTGGTTCAGATTGATGGCTGATCGCTA
CTCCTTCTCTCTGACCACGTTCTCCCCCAGGCATTGTTGGTCCTCCTGCC
GATCACCTGCTTGGTTATGAGGGCGTCGAAGGATCGCGCGGACCCCGCTT
CAGGAAGCTGAGTAAGGAGGAGATTGAGGACTATCTCACCAACCTATGAC
TACCAACGGAATTGTTCTTGCAACCGAAAAGAAAGCGAACTCGCCTCTCA
TTGACCCACCTTCCCTCTCCAAGATCTCCCTGATTACGCCCGACATCGGC
ATGGTCTACGCAGGAATGGGTCCCGATTACCGTGTGCTCGTGGATCGGGC
CCGCAAGGTTTCTCACACTGGCTACAAGCGCATTTACAACGAATACCCCC
CTACCCGGATATTAGTGCAGGACGTTGCCCGGGTTGTCCAAGAAGCGACT
CAGTCCGGTGGTGTCCGACCGTACGGTGTCAGCTTGTTGATTGCTGGCTG
GGACGAGGGCGTTGAACCTGAATCGGGAGAGGCTCAGCGGGGTGACGGTG
AGGACGAGCCTAAGAAAGCAACCGGCAAGACGGGTGGTATCTTGAAGGGC
GGCCCCAGTCTGTACCAAGTCGACCCCAGTGGCAGTTACTATCCGTGGAA
GGCTACGGCCATTGGAAGGCACGCGACGAGCGCAAAGACATTCCTTGAGA
AACGTTACACCGAAGGTCTCGAGCTGGAAGATGCCATTCACATCGCTCTT
CTAACTTTGAAGGAGACTATCGAGGGAGAGATGAACGGTGATACGATAGA
AATTGAATATGCCTTGAACGCTGTTAACCAGGGTGTAACTGCTCTGGGCA
TCAAAGCGGAAAGCTGGTTCAGATTGATGGCTGATCGCTACTCCTTCTCT
CTGACCACGTTCTCCCCCAGGCATTGTTGGTCCTCCTGCCGATCACCTGC
TTGGTTATGAGGGCGTCGAAGGATCGCGCGGACCCCGCTTCAGGAAGCTG
AGTAAGGAGGAGATTGAGGACTATCTCACCAACCTATGACTACCAACGGA
ATTGTTCTTGCAACCGAAAAGAAAGCGAACTCGCCTCTCATTGACCCACC
TTCCCTCTCCAAGATCTCCCTGATTACGCCCGACATCGGCATGGTCTACG
CAGGAATGGGTCCCGATTACCGTGTGCTCGTGGATCGGGCCCGCAAGGTT
TCTCACACTGGCTACAAGCGCATTTACAACGAATACCCCCCTACCCGGAT
ATTAGTGCAGGACGTTGCCCGGGTTGTCCAAGAAGCGACTCAGTCCGGTG
GTGTCCGACCGTACGGTGTCAGCTTGTTGATTGCTGGCTGGGACGAGGGC
GTTGAACCTGAATCGGGAGAGGCTCAGCGGGGTGACGGTGAGGACGAGCC
TAAGAAAGCAACCGGCAAGACGGGTGGTATCTTGAAGGGCGGCCCCAGTC
TGTACCAAGTCGACCCCAGTGGCAGTTACTATCCGTGGAAGGCTACGGCC
ATTGGAAGGCACGCGACGAGCGCAAAGACATTCCTTGAGAAACGTTACAC
CGAAGGTCTCGAGCTGGAAGATGCCATTCACATCGCTCTTCTAACTTTGA
AGGAGACTATCGAGGGAGAGATGAACGGTGATACGATAGAAATTGAATAT
GCCTTGAACGCTGTTAACCAGGGTGTAACTGCTCTGGGCATCAAAGCGGA
AAGCTGGTTCAGATTGATGGCTGATCGCTACTCCTTCTCTCTGACCACGT
TCTCCCCCAGGCATTGTTGGTCCTCCTGCCGATCACCTGCTTGGTTATGA
GGGCGTCGAAGGATCGCGCGGACCCCGCTTCAGGAAGCTGAGTAAGGAGG
AGATTGAGGACTATCTCACCAACCTATGACTACCAACGGAATTGTTCTTG
CAACCGAAAAGAAAGCGAACTCGCCTCTCATTGACCCACCTTCCCTCTCC
AAGATCTCCCTGATTACGCCCGACATCGGCATGGTCTACGCAGGAATGGG
TCCCGATTACCGTGTGCTCGTGGATCGGGCCCGCAAGGTTTCTCACACTG
GCTACAAGCGCATTTACAACGAATACCCCCCTACCCGGATATTAGTGCAG
GACGTTGCCCGGGTTGTCCAAGAAGCGACTCAGTCCGGTGGTGTCCGACC
GTACGGTGTCAGCTTGTTGATTGCTGGCTGGGACGAGGGCGTTGAACCTG
AATCGGGAGAGGCTCAGCGGGGTGACGGTGAGGACGAGCCTAAGAAAGCA
ACCGGCAAGACGGGTGGTATCTTGAAGGGCGGCCCCAGTCTGTACCAAGT
CGACCCCAGTGGCAGTTACTATCCGTGGAAGGCTACGGCCATTGGAAGGC
ACGCGACGAGCGCAAAGACATTCCTTGAGAAACGTTACACCGAAGGTCTC
GAGCTGGAAGATGCCATTCACATCGCTCTTCTAACTTTGAAGGAGACTAT
CGAGGGAGAGATGAACGGTGATACGATAGAAATTGAATATGCCTTGAACG
CTGTTAACCAGGGTGTAACTGCTCTGGGCATCAAAGCGGAAAGCTGGTTC
AGATTGATGGCTGATCGCTACTCCTTCTCTCTGACCACGTTCTCCCCCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005839proteasome core complex
GO:0019773proteasome core complex, alpha-subunit complex
Vocabulary: Biological Process
TermDefinition
GO:0051603proteolysis involved in cellular protein catabolic process
GO:0006511ubiquitin-dependent protein catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004298threonine-type endopeptidase activity
GO:0004175endopeptidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PCA2KYF_004405Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_004405-T1KYF_004405-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_004405-T1.cdsKYF_004405-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_004405-T1.exon5KYF_004405-T1.exon5Aspergillus niger KYF3exon
KYF_004405-T1.exon4KYF_004405-T1.exon4Aspergillus niger KYF3exon
KYF_004405-T1.exon3KYF_004405-T1.exon3Aspergillus niger KYF3exon
KYF_004405-T1.exon2KYF_004405-T1.exon2Aspergillus niger KYF3exon
KYF_004405-T1.exon1KYF_004405-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
NoteBUSCO:EOG092645G0
NoteMEROPS:MER0004996
DBxrefInterPro:IPR023332
DBxrefInterPro:IPR029055
DBxrefInterPro:IPR001353
DBxrefInterPro:IPR000426
DBxrefPFAM:PF10584
DBxrefPFAM:PF00227
ProductProbable proteasome subunit alpha type-2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:412341..413405 -
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