You are here

Home

KYF_004409-T1, KYF_004409-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_004409-T1
Unique NameKYF_004409-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:421499..422873+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_004409-T1 ID=KYF_004409-T1|Name=KYF_004409-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1375bp|location=Sequence derived from alignment at ch4:421499..422873+ (Aspergillus niger KYF3)
ATGTTTGGAAAAGAGGAATGCCCGGTCATCGGGGAGCCTATCTTCGAGAA
CAAGCCCTCGAATGACGAATATGTATCTGACCATAGGGAAACCATTCGTC
TCCAGCGTTCCTTCGGAACAGCTGCAGAGCGAGCGCGGCGGAACATGAAC
GCGAAGCTGGCCAACCCGCTAGCCGGATATACCCAAGAGGAATTGCGTCA
GCAGGGCATCAACTTCGCCATCACTCACCAGATGGGTGACGAAGAGGATG
TGCGTGCCTTTGCAATGGGTGCCATGCTGGCGCAAGTCCCTGAAAGATAT
GCAGAGGTGCCCGGTCTGACGCCCCAAGAGCTGGCAGTTCTGGAGAATGA
ATACGCTCATCGCTGGTCCCAGCCATGGACAATGTACCTGGTCATTTGCT
TGTGTTCCCTGTCGGCTGCTGTTCAGGGAATGGGTAAGTTCAAGACATTC
CTCAACACGCCTGGTGTGGCACGACACAGGCTAAGGCAATCGTGCACTCG
CAGATGAAACCGTCGTCAATGGCGCCCAGATTTTCTATAAGCATCAGTTC
GGCATTGATCGTGGCAGCGAGTCCAGGTCAAATTGGCTGCTTGGTCTCGT
AAACTGCGCACCCTACATGTGTTGTGCTCTGGTCGGCTGCTGGTTAACAG
TCCCGTTCAATGCCTGGTTTGGCCGACGAGGCACCATCTTCATTACCTGC
TGTTTTTCGGCCATCACCTGTCTCTGGCAAGGATTCGTCAACACTTGGTG
GCACATGTTCATTGCGCGCTTTGCTCTGGGCTTTGGCATTGGACCCAAGT
CAGCTACTGTCCCGATCTATGCCGCAGAAACAGCCCCTCCAGTCATTCGT
GGTGCTTTGGTCATGCAATGGCAGATGTGGACCGCCTTTGGCATCATGTT
CGGCTATGTCGCCGACCTGGCTTTCTTCGAGATACAGGACCCTGCAGGTA
TCGTCGGACTTAATTGGCGCTTGATGATGGCCTCGGCCTTGTTTCCAGCC
CTCCTCGTCTGCTGCTTTGTATTCACGTGCCCCGAATCGCCCCGCTGGTA
CATGTCGCGCAACCGCTATGACAAGGCCTATGAGTCCATGTGCAGTTTGC
GCTTCAACAAGGTCCAAGCTGCGCGTGACTTGTACTACATGCACACATTA
CTGCAGGCAGAGACGGGCATGAAACTCGGGCAGAACAAACTCATCGAACT
CATCGCAGTTCCCCGAAACCGGCGCGCATTGATTGCATCGGAGCTGGTCA
TGTTCATGCAACAGGTATGTCAACTCCCTACTGCAACTAAGCTCCTGCTA
ACTGATTGCATTAGTTCTGCGGTAAGTTACCGAGAATCCCCAGAATGCAA
CGTACTAACCGTCCTGCAGGTGTGA
back to top

Coding sequence (CDS) from alignment at ch4:421499..422873+

>KYF_004409-T1 ID=KYF_004409-T1|Name=KYF_004409-T1|organism=Aspergillus niger KYF3|type=CDS|length=3600bp|location=Sequence derived from alignment at ch4:421499..422873+ (Aspergillus niger KYF3)
ATGTTTGGAAAAGAGGAATGCCCGGTCATCGGGGAGCCTATCTTCGAGAA
CAAGCCCTCGAATGACGAATATGTATCTGACCATAGGGAAACCATTCGTC
TCCAGCGTTCCTTCGGAACAGCTGCAGAGCGAGCGCGGCGGAACATGAAC
GCGAAGCTGGCCAACCCGCTAGCCGGATATACCCAAGAGGAATTGCGTCA
GCAGGGCATCAACTTCGCCATCACTCACCAGATGGGTGACGAAGAGGATG
TGCGTGCCTTTGCAATGGGTGCCATGCTGGCGCAAGTCCCTGAAAGATAT
GCAGAGGTGCCCGGTCTGACGCCCCAAGAGCTGGCAGTTCTGGAGAATGA
ATACGCTCATCGCTGGTCCCAGCCATGGACAATGTACCTGGTCATTTGCT
TGTGTTCCCTGTCGGCTGCTGTTCAGGGAATGGATGAAACCGTCGTCAAT
GGCGCCCAGATTTTCTATAAGCATCAGTTCGGCATTGATCGTGGCAGCGA
GTCCAGGTCAAATTGGCTGCTTGGTCTCGTAAACTGCGCACCCTACATGT
GTTGTGCTCTGGTCGGCTGCTGGTTAACAGTCCCGTTCAATGCCTGGTTT
GGCCGACGAGGCACCATCTTCATTACCTGCTGTTTTTCGGCCATCACCTG
TCTCTGGCAAGGATTCGTCAACACTTGGTGGCACATGTTCATTGCGCGCT
TTGCTCTGGGCTTTGGCATTGGACCCAAGTCAGCTACTGTCCCGATCTAT
GCCGCAGAAACAGCCCCTCCAGTCATTCGTGGTGCTTTGGTCATGCAATG
GCAGATGTGGACCGCCTTTGGCATCATGTTCGGCTATGTCGCCGACCTGG
CTTTCTTCGAGATACAGGACCCTGCAGGTATCGTCGGACTTAATTGGCGC
TTGATGATGGCCTCGGCCTTGTTTCCAGCCCTCCTCGTCTGCTGCTTTGT
ATTCACGTGCCCCGAATCGCCCCGCTGGTACATGTCGCGCAACCGCTATG
ACAAGGCCTATGAGTCCATGTGCAGTTTGCGCTTCAACAAGGTCCAAGCT
GCGCGTGACTTGTACTACATGCACACATTACTGCAGGCAGAGACGGGCAT
GAAACTCGGGCAGAACAAACTCATCGAACTCATCGCAGTTCCCCGAAACC
GGCGCGCATTGATTGCATCGGAGCTGGTCATGTTCATGCAACAGGTGTGA
ATGTTTGGAAAAGAGGAATGCCCGGTCATCGGGGAGCCTATCTTCGAGAA
CAAGCCCTCGAATGACGAATATGTATCTGACCATAGGGAAACCATTCGTC
TCCAGCGTTCCTTCGGAACAGCTGCAGAGCGAGCGCGGCGGAACATGAAC
GCGAAGCTGGCCAACCCGCTAGCCGGATATACCCAAGAGGAATTGCGTCA
GCAGGGCATCAACTTCGCCATCACTCACCAGATGGGTGACGAAGAGGATG
TGCGTGCCTTTGCAATGGGTGCCATGCTGGCGCAAGTCCCTGAAAGATAT
GCAGAGGTGCCCGGTCTGACGCCCCAAGAGCTGGCAGTTCTGGAGAATGA
ATACGCTCATCGCTGGTCCCAGCCATGGACAATGTACCTGGTCATTTGCT
TGTGTTCCCTGTCGGCTGCTGTTCAGGGAATGGATGAAACCGTCGTCAAT
GGCGCCCAGATTTTCTATAAGCATCAGTTCGGCATTGATCGTGGCAGCGA
GTCCAGGTCAAATTGGCTGCTTGGTCTCGTAAACTGCGCACCCTACATGT
GTTGTGCTCTGGTCGGCTGCTGGTTAACAGTCCCGTTCAATGCCTGGTTT
GGCCGACGAGGCACCATCTTCATTACCTGCTGTTTTTCGGCCATCACCTG
TCTCTGGCAAGGATTCGTCAACACTTGGTGGCACATGTTCATTGCGCGCT
TTGCTCTGGGCTTTGGCATTGGACCCAAGTCAGCTACTGTCCCGATCTAT
GCCGCAGAAACAGCCCCTCCAGTCATTCGTGGTGCTTTGGTCATGCAATG
GCAGATGTGGACCGCCTTTGGCATCATGTTCGGCTATGTCGCCGACCTGG
CTTTCTTCGAGATACAGGACCCTGCAGGTATCGTCGGACTTAATTGGCGC
TTGATGATGGCCTCGGCCTTGTTTCCAGCCCTCCTCGTCTGCTGCTTTGT
ATTCACGTGCCCCGAATCGCCCCGCTGGTACATGTCGCGCAACCGCTATG
ACAAGGCCTATGAGTCCATGTGCAGTTTGCGCTTCAACAAGGTCCAAGCT
GCGCGTGACTTGTACTACATGCACACATTACTGCAGGCAGAGACGGGCAT
GAAACTCGGGCAGAACAAACTCATCGAACTCATCGCAGTTCCCCGAAACC
GGCGCGCATTGATTGCATCGGAGCTGGTCATGTTCATGCAACAGGTGTGA
ATGTTTGGAAAAGAGGAATGCCCGGTCATCGGGGAGCCTATCTTCGAGAA
CAAGCCCTCGAATGACGAATATGTATCTGACCATAGGGAAACCATTCGTC
TCCAGCGTTCCTTCGGAACAGCTGCAGAGCGAGCGCGGCGGAACATGAAC
GCGAAGCTGGCCAACCCGCTAGCCGGATATACCCAAGAGGAATTGCGTCA
GCAGGGCATCAACTTCGCCATCACTCACCAGATGGGTGACGAAGAGGATG
TGCGTGCCTTTGCAATGGGTGCCATGCTGGCGCAAGTCCCTGAAAGATAT
GCAGAGGTGCCCGGTCTGACGCCCCAAGAGCTGGCAGTTCTGGAGAATGA
ATACGCTCATCGCTGGTCCCAGCCATGGACAATGTACCTGGTCATTTGCT
TGTGTTCCCTGTCGGCTGCTGTTCAGGGAATGGATGAAACCGTCGTCAAT
GGCGCCCAGATTTTCTATAAGCATCAGTTCGGCATTGATCGTGGCAGCGA
GTCCAGGTCAAATTGGCTGCTTGGTCTCGTAAACTGCGCACCCTACATGT
GTTGTGCTCTGGTCGGCTGCTGGTTAACAGTCCCGTTCAATGCCTGGTTT
GGCCGACGAGGCACCATCTTCATTACCTGCTGTTTTTCGGCCATCACCTG
TCTCTGGCAAGGATTCGTCAACACTTGGTGGCACATGTTCATTGCGCGCT
TTGCTCTGGGCTTTGGCATTGGACCCAAGTCAGCTACTGTCCCGATCTAT
GCCGCAGAAACAGCCCCTCCAGTCATTCGTGGTGCTTTGGTCATGCAATG
GCAGATGTGGACCGCCTTTGGCATCATGTTCGGCTATGTCGCCGACCTGG
CTTTCTTCGAGATACAGGACCCTGCAGGTATCGTCGGACTTAATTGGCGC
TTGATGATGGCCTCGGCCTTGTTTCCAGCCCTCCTCGTCTGCTGCTTTGT
ATTCACGTGCCCCGAATCGCCCCGCTGGTACATGTCGCGCAACCGCTATG
ACAAGGCCTATGAGTCCATGTGCAGTTTGCGCTTCAACAAGGTCCAAGCT
GCGCGTGACTTGTACTACATGCACACATTACTGCAGGCAGAGACGGGCAT
GAAACTCGGGCAGAACAAACTCATCGAACTCATCGCAGTTCCCCGAAACC
GGCGCGCATTGATTGCATCGGAGCTGGTCATGTTCATGCAACAGGTGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_004409KYF_004409Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_004409-T1.exon1KYF_004409-T1.exon1Aspergillus niger KYF3exon
KYF_004409-T1.exon2KYF_004409-T1.exon2Aspergillus niger KYF3exon
KYF_004409-T1.exon3KYF_004409-T1.exon3Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_004409-T1.cdsKYF_004409-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_004409-T1KYF_004409-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR005828
DBxrefPFAM:PF00083
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:421499..422873 +
Powered by Drupal