|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:601234..602440+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_004470-T1 ID=KYF_004470-T1|Name=KYF_004470-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1207bp|location=Sequence derived from alignment at ch4:601234..602440+ (Aspergillus niger KYF3) ATGGCCAACCCCAGGATAATGACCTGGGACCCAACCCAATTCTTCCGGAC
GGAAGAAGGCCTTCCCCCGAGTCCCTACGCCCTGCTCATCCTCAACCATC
CAATCAACGAGAGAGCATATGATGTTTTACGAAAGCATGGTATTACCACC
ATATCCTTTACACCCTATATCATATTACATACAGAAGAATGTATACTGAA
TAAAAGGATAGCACTAACAACCGTCTGCGCCGACGGCGGCGCCAACCACT
TCTACGAGATGATGAAAGCGCGGGGGAGAGAGGATGTAGATGTATGTATA
TACCCACCATATCCATGTTATACATATGCTCCATACTTTACCCATCTATA
TACATGCAAATATCCTTCTGGATAGGAAGTATAGTACTACACTACATACA
CCCATCACAATAATCCCCATATAATGAAATAACTAATAATAATAAATCCA
GCACCCCACCACCATAATCGGCGACCTCGACTCCATCCACCCACACATAA
AATCCCACTACCAGTCCCACGGAGTAAACGTCATCTACCACCACGACGAC
TACAGCACCGATTTCACCAAAGCGCTGCGGTACATTCGCGCCAACACCAG
CGAAATCTTATCCTCATCTGCTGCATCATCCACTCCTGACCATGACCAAG
CAAACAACACCCATCAACAATACAATCAAGATGACAGTCTCTCAATATTA
ATCCTCGGCGGCCTCGGTGGCCGCGTCGACCAGGCATTTTCGCAGATACA
TCATTTGTATTCTAACTCTACTATTCCCTCCTCCCCCTCCTCTAGTTCTT
CTACTGAAGAAGCACGGAAAAGAGGAGAAGGGGCATTATACCTCGTCTCT
GAAGAAAGTATCACGTTCATTCTGCATCCGGGGAAGAATGTCATTCGCAC
GCCGGGGGTTAAGAGGGGTGATATACCATCGTCGTCATCATCTTCTTCGT
CGGCCTCAGGTGGCATCAAGGAAAGGGAAGAAGGGTATTATCTCCTTGAA
GAAAACGTGGGCATCATCCCCCTCTCCGGGATGGAGCGGATCACGACAAA
AGGATTTCAGTGGGATGTGGAATCCTGGGCGACGGAGATCGGGGGCCAGA
TTAGTACGAGTAATCATATCCGGGCGGAGGAGGTGGAGGTTACGGCTGGG
GGAGCGGTGTTGTTTACGGTGGAGTTGGCGGGGAGGTTTAAGCGGATTTC
TTCTTAG back to topCoding sequence (CDS) from alignment at ch4:601234..602440+ >KYF_004470-T1 ID=KYF_004470-T1|Name=KYF_004470-T1|organism=Aspergillus niger KYF3|type=CDS|length=2925bp|location=Sequence derived from alignment at ch4:601234..602440+ (Aspergillus niger KYF3) ATGGCCAACCCCAGGATAATGACCTGGGACCCAACCCAATTCTTCCGGAC GGAAGAAGGCCTTCCCCCGAGTCCCTACGCCCTGCTCATCCTCAACCATC CAATCAACGAGAGAGCATATGATGTTTTACGAAAGCATGCACTAACAACC GTCTGCGCCGACGGCGGCGCCAACCACTTCTACGAGATGATGAAAGCGCG GGGGAGAGAGGATGTAGATCACCCCACCACCATAATCGGCGACCTCGACT CCATCCACCCACACATAAAATCCCACTACCAGTCCCACGGAGTAAACGTC ATCTACCACCACGACGACTACAGCACCGATTTCACCAAAGCGCTGCGGTA CATTCGCGCCAACACCAGCGAAATCTTATCCTCATCTGCTGCATCATCCA CTCCTGACCATGACCAAGCAAACAACACCCATCAACAATACAATCAAGAT GACAGTCTCTCAATATTAATCCTCGGCGGCCTCGGTGGCCGCGTCGACCA GGCATTTTCGCAGATACATCATTTGTATTCTAACTCTACTATTCCCTCCT CCCCCTCCTCTAGTTCTTCTACTGAAGAAGCACGGAAAAGAGGAGAAGGG GCATTATACCTCGTCTCTGAAGAAAGTATCACGTTCATTCTGCATCCGGG GAAGAATGTCATTCGCACGCCGGGGGTTAAGAGGGGTGATATACCATCGT CGTCATCATCTTCTTCGTCGGCCTCAGGTGGCATCAAGGAAAGGGAAGAA GGGTATTATCTCCTTGAAGAAAACGTGGGCATCATCCCCCTCTCCGGGAT GGAGCGGATCACGACAAAAGGATTTCAGTGGGATGTGGAATCCTGGGCGA CGGAGATCGGGGGCCAGATTAGTACGAGTAATCATATCCGGGCGGAGGAG GTGGAGGTTACGGCTGGGGGAGCGGTGTTGTTTACGGTGGAGTTGGCGGG GAGGTTTAAGCGGATTTCTTCTTAGATGGCCAACCCCAGGATAATGACCT GGGACCCAACCCAATTCTTCCGGACGGAAGAAGGCCTTCCCCCGAGTCCC TACGCCCTGCTCATCCTCAACCATCCAATCAACGAGAGAGCATATGATGT TTTACGAAAGCATGCACTAACAACCGTCTGCGCCGACGGCGGCGCCAACC ACTTCTACGAGATGATGAAAGCGCGGGGGAGAGAGGATGTAGATCACCCC ACCACCATAATCGGCGACCTCGACTCCATCCACCCACACATAAAATCCCA CTACCAGTCCCACGGAGTAAACGTCATCTACCACCACGACGACTACAGCA CCGATTTCACCAAAGCGCTGCGGTACATTCGCGCCAACACCAGCGAAATC TTATCCTCATCTGCTGCATCATCCACTCCTGACCATGACCAAGCAAACAA CACCCATCAACAATACAATCAAGATGACAGTCTCTCAATATTAATCCTCG GCGGCCTCGGTGGCCGCGTCGACCAGGCATTTTCGCAGATACATCATTTG TATTCTAACTCTACTATTCCCTCCTCCCCCTCCTCTAGTTCTTCTACTGA AGAAGCACGGAAAAGAGGAGAAGGGGCATTATACCTCGTCTCTGAAGAAA GTATCACGTTCATTCTGCATCCGGGGAAGAATGTCATTCGCACGCCGGGG GTTAAGAGGGGTGATATACCATCGTCGTCATCATCTTCTTCGTCGGCCTC AGGTGGCATCAAGGAAAGGGAAGAAGGGTATTATCTCCTTGAAGAAAACG TGGGCATCATCCCCCTCTCCGGGATGGAGCGGATCACGACAAAAGGATTT CAGTGGGATGTGGAATCCTGGGCGACGGAGATCGGGGGCCAGATTAGTAC GAGTAATCATATCCGGGCGGAGGAGGTGGAGGTTACGGCTGGGGGAGCGG TGTTGTTTACGGTGGAGTTGGCGGGGAGGTTTAAGCGGATTTCTTCTTAG ATGGCCAACCCCAGGATAATGACCTGGGACCCAACCCAATTCTTCCGGAC GGAAGAAGGCCTTCCCCCGAGTCCCTACGCCCTGCTCATCCTCAACCATC CAATCAACGAGAGAGCATATGATGTTTTACGAAAGCATGCACTAACAACC GTCTGCGCCGACGGCGGCGCCAACCACTTCTACGAGATGATGAAAGCGCG GGGGAGAGAGGATGTAGATCACCCCACCACCATAATCGGCGACCTCGACT CCATCCACCCACACATAAAATCCCACTACCAGTCCCACGGAGTAAACGTC ATCTACCACCACGACGACTACAGCACCGATTTCACCAAAGCGCTGCGGTA CATTCGCGCCAACACCAGCGAAATCTTATCCTCATCTGCTGCATCATCCA CTCCTGACCATGACCAAGCAAACAACACCCATCAACAATACAATCAAGAT GACAGTCTCTCAATATTAATCCTCGGCGGCCTCGGTGGCCGCGTCGACCA GGCATTTTCGCAGATACATCATTTGTATTCTAACTCTACTATTCCCTCCT CCCCCTCCTCTAGTTCTTCTACTGAAGAAGCACGGAAAAGAGGAGAAGGG GCATTATACCTCGTCTCTGAAGAAAGTATCACGTTCATTCTGCATCCGGG GAAGAATGTCATTCGCACGCCGGGGGTTAAGAGGGGTGATATACCATCGT CGTCATCATCTTCTTCGTCGGCCTCAGGTGGCATCAAGGAAAGGGAAGAA GGGTATTATCTCCTTGAAGAAAACGTGGGCATCATCCCCCTCTCCGGGAT GGAGCGGATCACGACAAAAGGATTTCAGTGGGATGTGGAATCCTGGGCGA CGGAGATCGGGGGCCAGATTAGTACGAGTAATCATATCCGGGCGGAGGAG GTGGAGGTTACGGCTGGGGGAGCGGTGTTGTTTACGGTGGAGTTGGCGGG GAGGTTTAAGCGGATTTCTTCTTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
Term | Definition |
GO:0005524 | ATP binding |
GO:0004788 | thiamine diphosphokinase activity |
GO:0030975 | thiamine binding |
Vocabulary: Biological Process
Term | Definition |
GO:0006772 | thiamine metabolic process |
GO:0009229 | thiamine diphosphate biosynthetic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
Property Name | Value |
DBxref | InterPro:IPR036371 |
DBxref | InterPro:IPR007371 |
DBxref | InterPro:IPR036759 |
DBxref | InterPro:IPR006282 |
DBxref | InterPro:IPR016966 |
DBxref | InterPro:IPR007373 |
DBxref | PFAM:PF04263 |
DBxref | PFAM:PF04265 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch4 | supercontig | ch4:601234..602440 + |
|