You are here

Home

KYF_004493-T1, KYF_004493-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_004493-T1
Unique NameKYF_004493-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:685987..687163+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_004493-T1 ID=KYF_004493-T1|Name=KYF_004493-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1177bp|location=Sequence derived from alignment at ch4:685987..687163+ (Aspergillus niger KYF3)
ATGTCCGTCACGACAAAAGCCACCATCGCCTCCTTCGGCGGCAAGCTCCT
CAAGCTCACCCACGCCGCCACCTCCACCAAATGTGAAATGGGCTTCAACC
TCTACCTGCCCCCTCAAGCCTTCCAGAACCCCTCCTCCAAGGTCCCCGTC
CTCATCTATCTCTCGGGTTTGACCTGCACGGCCGAGAACTGCTCCGAGAA
GGGCTTCTTCCAGCACGGTGCGAGCAAGAAGGGCATTGCCGTGCTGTATC
CTGATACGAGTCCTCGTATGTCCCCACCCCCCACATTCCCTACTTTATTC
CATAACCAAACTGCATTATCTACCCTAATATCGTAGTAAATCTAATAATG
GATATGCTAATAACGGATGGGGGAAAATATAGGCGGCCTCAACATCCCCG
GCGAAGCCGACAGCTACGACTTCGGCACCGGCGCGGGCTTCTATGTCGAC
GCGACCAAGTCGCCCTACGACAACGGATACAACATGTACACTTACATCAC
AGAGGAATTGCCCGCTACGGTTTTTGCCGCGTTCCCGCAGCTGGATAGTG
AGCGGGTGAGTATTACGGGTCATAGTATGGGGGGACATGGGGCTTTGACT
TTGGTACGTTCATACTACCCTTGATCTTATTGATATTATCTATGATTTGG
ATTTTGGGTTACTTCAAGGAGGGGGCTTTTTTTGGGCTACTAATGGTGTA
TGTAGTTCCTCCGCAACCCCGGCAAATACAAGTCCGTGTCTGCGTTCGCA
CCCATCACCAACCCGATTAACTGCCCGTGGGGACAAAAGGCCTTCTCGGG
ATACTTTGGGGAGGATCAGCAGGAGAAGTGGAAGGAGCATGATGCTACGG
AGTTGGTGAAGAAATGGAAGGGTGGGAGGTTGGATGTTTTGATTGATGTT
GTATGTTCACTCACACTCCCTTTTATTTTGACCCCCTTTAAGTTGGTTAC
TGGGATGTGTACTAATGATTTGTCTGTGTGTTTGTGTGCAGGGCACCGGA
GACAACTTTTACAAGCAGGGCCAACTTCTTCCTGAGAACTTTGAGAAAGC
TGCCAAGGAGGCCGGCGTGGAGGGCGTGACGATTCGGTATCAGCCTGATT
ATGATCACAGTTATTATACTATGGCTACGTTCTCGGATGATCATGTGGAG
CATGCGGCGAAGTTTTTGTTTGCTTAG
back to top

Coding sequence (CDS) from alignment at ch4:685987..687163+

>KYF_004493-T1 ID=KYF_004493-T1|Name=KYF_004493-T1|organism=Aspergillus niger KYF3|type=CDS|length=3468bp|location=Sequence derived from alignment at ch4:685987..687163+ (Aspergillus niger KYF3)
ATGTCCGTCACGACAAAAGCCACCATCGCCTCCTTCGGCGGCAAGCTCCT
CAAGCTCACCCACGCCGCCACCTCCACCAAATGTGAAATGGGCTTCAACC
TCTACCTGCCCCCTCAAGCCTTCCAGAACCCCTCCTCCAAGGTCCCCGTC
CTCATCTATCTCTCGGGTTTGACCTGCACGGCCGAGAACTGCTCCGAGAA
GGGCTTCTTCCAGCACGGTGCGAGCAAGAAGGGCATTGCCGTGCTGTATC
CTGATACGAGTCCTCGCGGCCTCAACATCCCCGGCGAAGCCGACAGCTAC
GACTTCGGCACCGGCGCGGGCTTCTATGTCGACGCGACCAAGTCGCCCTA
CGACAACGGATACAACATGTACACTTACATCACAGAGGAATTGCCCGCTA
CGGTTTTTGCCGCGTTCCCGCAGCTGGATAGTGAGCGGGTGAGTATTACG
GGTCATAGTATGGGGGGACATGGGGCTTTGACTTTGTTCCTCCGCAACCC
CGGCAAATACAAGTCCGTGTCTGCGTTCGCACCCATCACCAACCCGATTA
ACTGCCCGTGGGGACAAAAGGCCTTCTCGGGATACTTTGGGGAGGATCAG
CAGGAGAAGTGGAAGGAGCATGATGCTACGGAGTTGGTGAAGAAATGGAA
GGGTGGGAGGTTGGATGTTTTGATTGATGTTGGCACCGGAGACAACTTTT
ACAAGCAGGGCCAACTTCTTCCTGAGAACTTTGAGAAAGCTGCCAAGGAG
GCCGGCGTGGAGGGCGTGACGATTCGGTATCAGCCTGATTATGATCACAG
TTATTATACTATGGCTACGTTCTCGGATGATCATGTGGAGCATGCGGCGA
AGTTTTTGTTTGCTTAGATGTCCGTCACGACAAAAGCCACCATCGCCTCC
TTCGGCGGCAAGCTCCTCAAGCTCACCCACGCCGCCACCTCCACCAAATG
TGAAATGGGCTTCAACCTCTACCTGCCCCCTCAAGCCTTCCAGAACCCCT
CCTCCAAGGTCCCCGTCCTCATCTATCTCTCGGGTTTGACCTGCACGGCC
GAGAACTGCTCCGAGAAGGGCTTCTTCCAGCACGGTGCGAGCAAGAAGGG
CATTGCCGTGCTGTATCCTGATACGAGTCCTCGCGGCCTCAACATCCCCG
GCGAAGCCGACAGCTACGACTTCGGCACCGGCGCGGGCTTCTATGTCGAC
GCGACCAAGTCGCCCTACGACAACGGATACAACATGTACACTTACATCAC
AGAGGAATTGCCCGCTACGGTTTTTGCCGCGTTCCCGCAGCTGGATAGTG
AGCGGGTGAGTATTACGGGTCATAGTATGGGGGGACATGGGGCTTTGACT
TTGTTCCTCCGCAACCCCGGCAAATACAAGTCCGTGTCTGCGTTCGCACC
CATCACCAACCCGATTAACTGCCCGTGGGGACAAAAGGCCTTCTCGGGAT
ACTTTGGGGAGGATCAGCAGGAGAAGTGGAAGGAGCATGATGCTACGGAG
TTGGTGAAGAAATGGAAGGGTGGGAGGTTGGATGTTTTGATTGATGTTGG
CACCGGAGACAACTTTTACAAGCAGGGCCAACTTCTTCCTGAGAACTTTG
AGAAAGCTGCCAAGGAGGCCGGCGTGGAGGGCGTGACGATTCGGTATCAG
CCTGATTATGATCACAGTTATTATACTATGGCTACGTTCTCGGATGATCA
TGTGGAGCATGCGGCGAAGTTTTTGTTTGCTTAGATGTCCGTCACGACAA
AAGCCACCATCGCCTCCTTCGGCGGCAAGCTCCTCAAGCTCACCCACGCC
GCCACCTCCACCAAATGTGAAATGGGCTTCAACCTCTACCTGCCCCCTCA
AGCCTTCCAGAACCCCTCCTCCAAGGTCCCCGTCCTCATCTATCTCTCGG
GTTTGACCTGCACGGCCGAGAACTGCTCCGAGAAGGGCTTCTTCCAGCAC
GGTGCGAGCAAGAAGGGCATTGCCGTGCTGTATCCTGATACGAGTCCTCG
CGGCCTCAACATCCCCGGCGAAGCCGACAGCTACGACTTCGGCACCGGCG
CGGGCTTCTATGTCGACGCGACCAAGTCGCCCTACGACAACGGATACAAC
ATGTACACTTACATCACAGAGGAATTGCCCGCTACGGTTTTTGCCGCGTT
CCCGCAGCTGGATAGTGAGCGGGTGAGTATTACGGGTCATAGTATGGGGG
GACATGGGGCTTTGACTTTGTTCCTCCGCAACCCCGGCAAATACAAGTCC
GTGTCTGCGTTCGCACCCATCACCAACCCGATTAACTGCCCGTGGGGACA
AAAGGCCTTCTCGGGATACTTTGGGGAGGATCAGCAGGAGAAGTGGAAGG
AGCATGATGCTACGGAGTTGGTGAAGAAATGGAAGGGTGGGAGGTTGGAT
GTTTTGATTGATGTTGGCACCGGAGACAACTTTTACAAGCAGGGCCAACT
TCTTCCTGAGAACTTTGAGAAAGCTGCCAAGGAGGCCGGCGTGGAGGGCG
TGACGATTCGGTATCAGCCTGATTATGATCACAGTTATTATACTATGGCT
ACGTTCTCGGATGATCATGTGGAGCATGCGGCGAAGTTTTTGTTTGCTTA
GATGTCCGTCACGACAAAAGCCACCATCGCCTCCTTCGGCGGCAAGCTCC
TCAAGCTCACCCACGCCGCCACCTCCACCAAATGTGAAATGGGCTTCAAC
CTCTACCTGCCCCCTCAAGCCTTCCAGAACCCCTCCTCCAAGGTCCCCGT
CCTCATCTATCTCTCGGGTTTGACCTGCACGGCCGAGAACTGCTCCGAGA
AGGGCTTCTTCCAGCACGGTGCGAGCAAGAAGGGCATTGCCGTGCTGTAT
CCTGATACGAGTCCTCGCGGCCTCAACATCCCCGGCGAAGCCGACAGCTA
CGACTTCGGCACCGGCGCGGGCTTCTATGTCGACGCGACCAAGTCGCCCT
ACGACAACGGATACAACATGTACACTTACATCACAGAGGAATTGCCCGCT
ACGGTTTTTGCCGCGTTCCCGCAGCTGGATAGTGAGCGGGTGAGTATTAC
GGGTCATAGTATGGGGGGACATGGGGCTTTGACTTTGTTCCTCCGCAACC
CCGGCAAATACAAGTCCGTGTCTGCGTTCGCACCCATCACCAACCCGATT
AACTGCCCGTGGGGACAAAAGGCCTTCTCGGGATACTTTGGGGAGGATCA
GCAGGAGAAGTGGAAGGAGCATGATGCTACGGAGTTGGTGAAGAAATGGA
AGGGTGGGAGGTTGGATGTTTTGATTGATGTTGGCACCGGAGACAACTTT
TACAAGCAGGGCCAACTTCTTCCTGAGAACTTTGAGAAAGCTGCCAAGGA
GGCCGGCGTGGAGGGCGTGACGATTCGGTATCAGCCTGATTATGATCACA
GTTATTATACTATGGCTACGTTCTCGGATGATCATGTGGAGCATGCGGCG
AAGTTTTTGTTTGCTTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0018738S-formylglutathione hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0046294formaldehyde catabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_004493KYF_004493Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_004493-T1.exon1KYF_004493-T1.exon1Aspergillus niger KYF3exon
KYF_004493-T1.exon2KYF_004493-T1.exon2Aspergillus niger KYF3exon
KYF_004493-T1.exon3KYF_004493-T1.exon3Aspergillus niger KYF3exon
KYF_004493-T1.exon4KYF_004493-T1.exon4Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_004493-T1.cdsKYF_004493-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_004493-T1KYF_004493-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
NoteMEROPS:MER0043126
NoteCAZy:CE1
DBxrefInterPro:IPR014186
DBxrefInterPro:IPR029058
DBxrefInterPro:IPR000801
DBxrefPFAM:PF00326
DBxrefPFAM:PF00756
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:685987..687163 +
Powered by Drupal