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KYF_004529-T1, KYF_004529-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_004529-T1
Unique NameKYF_004529-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:797334..798335-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_004529-T1 ID=KYF_004529-T1|Name=KYF_004529-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1002bp|location=Sequence derived from alignment at ch4:797334..798335- (Aspergillus niger KYF3)
ATGGCTGCCAACCCTGTGGAAAATGGACTATTTGTCCATAACAACACTAC
CGCTCCAGCCCACCCCGGCTTGCTGAGCATGTTCTCACTGAAGGGCAAGA
CTGCCATCGTTACCGGCGCCGGTGCTGGCATCGGCCTTTCCGTAGCTATT
GGCCTGGCTGAAGCTGGTGCAAATGTGGCCTTGTGGTATAGCAGCAACCC
CAACTGCATCGAGCGGGCCGCGGAAATTGCCTCCAAGTATGGTGTCCAGG
GTCAGTAGCCCTCAAACCATTTTCCCCACTTACCGTCAGACATACTTTAC
TAACGCTCAATCTAGCCCAGGCGTACAAGGTCGAAATCACCAAGCCCGAA
GCCGTGCAGGCGGCCGTTGACCAGGTTGTGAAAGACTTCAATGGCCGACT
AGACGTTTTCATCGCCAATGCCGGTATCCCCTGGACTAAAGGTCCCATGG
TTGACGGTCCACTGGACCACTACTCGAGTGTTGTCGACGTCGACCTGAAC
GGAACTTTCTACTGCGCCAGGGCAGCGGCAACCCACTGGAGGAGACAAAA
GGAGGAGGGCACCGATATCAATGGTAACGCGCTCAACAACTTCACCTATG
GCAGCTTTGTGGCCACCGCTTCCATGAGCGGTCACATTGTCAACTTCCCT
CAGATGCAGGCAGCATACAACGCCTCCAAAGCGGGTGTCATCCATCTTTG
TAAGTGGAATAACCTTGTAGGCATAGACTTGCACTGTACTAATCCCCTAT
GCAGGCAAGTCGCTGGCTGTCGAGTGGGTTAAGTTTGCGCGTGCCAACAC
CGTTTCTCCCGGATACATTGCGACAGAGATCTCGAATTTCATCCCAGATG
ATGTCAAGGGCATCTGGAAGGACAAGATTCCCATGGGTCGCGAGGGAGAA
CCCGAGGAGCTGAAGGGCGCGTATCTGTACCTGGCATCGGATGCATCCAG
CTACACCACTGGAGCAGACATTGTGGTTGACGGCGGCTACTGCGCCCCGT
AG
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Coding sequence (CDS) from alignment at ch4:797334..798335-

>KYF_004529-T1 ID=KYF_004529-T1|Name=KYF_004529-T1|organism=Aspergillus niger KYF3|type=CDS|length=2646bp|location=Sequence derived from alignment at ch4:797334..798335- (Aspergillus niger KYF3)
GCAAGTCGCTGGCTGTCGAGTGGGTTAAGTTTGCGCGTGCCAACACCGTT
TCTCCCGGATACATTGCGACAGAGATCTCGAATTTCATCCCAGATGATGT
CAAGGGCATCTGGAAGGACAAGATTCCCATGGGTCGCGAGGGAGAACCCG
AGGAGCTGAAGGGCGCGTATCTGTACCTGGCATCGGATGCATCCAGCTAC
ACCACTGGAGCAGACATTGTGGTTGACGGCGGCTACTGCGCCCCGTAGCC
CAGGCGTACAAGGTCGAAATCACCAAGCCCGAAGCCGTGCAGGCGGCCGT
TGACCAGGTTGTGAAAGACTTCAATGGCCGACTAGACGTTTTCATCGCCA
ATGCCGGTATCCCCTGGACTAAAGGTCCCATGGTTGACGGTCCACTGGAC
CACTACTCGAGTGTTGTCGACGTCGACCTGAACGGAACTTTCTACTGCGC
CAGGGCAGCGGCAACCCACTGGAGGAGACAAAAGGAGGAGGGCACCGATA
TCAATGGTAACGCGCTCAACAACTTCACCTATGGCAGCTTTGTGGCCACC
GCTTCCATGAGCGGTCACATTGTCAACTTCCCTCAGATGCAGGCAGCATA
CAACGCCTCCAAAGCGGGTGTCATCCATCTTTATGGCTGCCAACCCTGTG
GAAAATGGACTATTTGTCCATAACAACACTACCGCTCCAGCCCACCCCGG
CTTGCTGAGCATGTTCTCACTGAAGGGCAAGACTGCCATCGTTACCGGCG
CCGGTGCTGGCATCGGCCTTTCCGTAGCTATTGGCCTGGCTGAAGCTGGT
GCAAATGTGGCCTTGTGGTATAGCAGCAACCCCAACTGCATCGAGCGGGC
CGCGGAAATTGCCTCCAAGTATGGTGTCCAGGGCAAGTCGCTGGCTGTCG
AGTGGGTTAAGTTTGCGCGTGCCAACACCGTTTCTCCCGGATACATTGCG
ACAGAGATCTCGAATTTCATCCCAGATGATGTCAAGGGCATCTGGAAGGA
CAAGATTCCCATGGGTCGCGAGGGAGAACCCGAGGAGCTGAAGGGCGCGT
ATCTGTACCTGGCATCGGATGCATCCAGCTACACCACTGGAGCAGACATT
GTGGTTGACGGCGGCTACTGCGCCCCGTAGCCCAGGCGTACAAGGTCGAA
ATCACCAAGCCCGAAGCCGTGCAGGCGGCCGTTGACCAGGTTGTGAAAGA
CTTCAATGGCCGACTAGACGTTTTCATCGCCAATGCCGGTATCCCCTGGA
CTAAAGGTCCCATGGTTGACGGTCCACTGGACCACTACTCGAGTGTTGTC
GACGTCGACCTGAACGGAACTTTCTACTGCGCCAGGGCAGCGGCAACCCA
CTGGAGGAGACAAAAGGAGGAGGGCACCGATATCAATGGTAACGCGCTCA
ACAACTTCACCTATGGCAGCTTTGTGGCCACCGCTTCCATGAGCGGTCAC
ATTGTCAACTTCCCTCAGATGCAGGCAGCATACAACGCCTCCAAAGCGGG
TGTCATCCATCTTTATGGCTGCCAACCCTGTGGAAAATGGACTATTTGTC
CATAACAACACTACCGCTCCAGCCCACCCCGGCTTGCTGAGCATGTTCTC
ACTGAAGGGCAAGACTGCCATCGTTACCGGCGCCGGTGCTGGCATCGGCC
TTTCCGTAGCTATTGGCCTGGCTGAAGCTGGTGCAAATGTGGCCTTGTGG
TATAGCAGCAACCCCAACTGCATCGAGCGGGCCGCGGAAATTGCCTCCAA
GTATGGTGTCCAGGGCAAGTCGCTGGCTGTCGAGTGGGTTAAGTTTGCGC
GTGCCAACACCGTTTCTCCCGGATACATTGCGACAGAGATCTCGAATTTC
ATCCCAGATGATGTCAAGGGCATCTGGAAGGACAAGATTCCCATGGGTCG
CGAGGGAGAACCCGAGGAGCTGAAGGGCGCGTATCTGTACCTGGCATCGG
ATGCATCCAGCTACACCACTGGAGCAGACATTGTGGTTGACGGCGGCTAC
TGCGCCCCGTAGCCCAGGCGTACAAGGTCGAAATCACCAAGCCCGAAGCC
GTGCAGGCGGCCGTTGACCAGGTTGTGAAAGACTTCAATGGCCGACTAGA
CGTTTTCATCGCCAATGCCGGTATCCCCTGGACTAAAGGTCCCATGGTTG
ACGGTCCACTGGACCACTACTCGAGTGTTGTCGACGTCGACCTGAACGGA
ACTTTCTACTGCGCCAGGGCAGCGGCAACCCACTGGAGGAGACAAAAGGA
GGAGGGCACCGATATCAATGGTAACGCGCTCAACAACTTCACCTATGGCA
GCTTTGTGGCCACCGCTTCCATGAGCGGTCACATTGTCAACTTCCCTCAG
ATGCAGGCAGCATACAACGCCTCCAAAGCGGGTGTCATCCATCTTTATGG
CTGCCAACCCTGTGGAAAATGGACTATTTGTCCATAACAACACTACCGCT
CCAGCCCACCCCGGCTTGCTGAGCATGTTCTCACTGAAGGGCAAGACTGC
CATCGTTACCGGCGCCGGTGCTGGCATCGGCCTTTCCGTAGCTATTGGCC
TGGCTGAAGCTGGTGCAAATGTGGCCTTGTGGTATAGCAGCAACCCCAAC
TGCATCGAGCGGGCCGCGGAAATTGCCTCCAAGTATGGTGTCCAGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
LXR3KYF_004529Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_004529-T1KYF_004529-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_004529-T1.cdsKYF_004529-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_004529-T1.exon3KYF_004529-T1.exon3Aspergillus niger KYF3exon
KYF_004529-T1.exon2KYF_004529-T1.exon2Aspergillus niger KYF3exon
KYF_004529-T1.exon1KYF_004529-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR020904
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
ProductL-xylulose reductase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:797334..798335 -
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