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KYF_004659-T1, KYF_004659-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_004659-T1
Unique NameKYF_004659-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:1209926..1211551-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_004659-T1 ID=KYF_004659-T1|Name=KYF_004659-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1626bp|location=Sequence derived from alignment at ch4:1209926..1211551- (Aspergillus niger KYF3)
ATGGCTGCCCCCGTCCTCCCTCTGCAGCAGGTCAAGCTGCCGGCGCTGCC
CTCGACCCGTTTGACGCCGGAGCAGCAATATTGGAAAACATTCAAGAATC
CTCTCCTCATCCCCTCGCCAGCCAATGGCCCCGTCAACCTCATCACGCAA
CCCTCCGCTCCCTCCTCTGCCTCCGCCTTCCCTTCCCTCACCCAACCCCC
CGATGTGTTCACCGTGACCACCGGCGCCCGCGTCCAGATCTACTCCATCC
GCACTCGCAAACTCCTCCGCACAATCACCCGCTTCGATGATACGGTACGA
GGCACAGATGTCCGTCCCGACGGGCGAGTCATCGCCGTTGGTGACGACTC
TGGTACGGTGCAGGTGTTCGACGTGAGCTCCCGTGCCATCTTGAAGACAT
GGAAGGATCACAAGCAGCCCGTCTGGGTCACGAAATTCTCTCCCAGCGAC
CCTACATGCGTCATGACCGCCAGTGACGATCGGACGGTACGACTGTGGGA
TCTGCCCAGCGAGAACAGCCAGAAGGTCTTCACTGGCCATACCGATTACG
TGCGCAGCGGTGCATTTATGCCGGGGTCTCTGGCCTCCTCCGGCCTGGTG
GTCTCTGGTAGTTACGACCGGACCGTGCGACTGTGGGATCCTCGCGTTGA
AAACCGGTCCGCCATGACATTCAAGATGGGCGCAGCGATTGAGACGGTGC
TCCCCATGCCCACGGGCACGACGGTGCTTGCGGCGGCCGACAACAAGATC
GCGGTGCTGGATATCGTGGCCGGTAAGCCCCTGCACATGATTCAGAGCCA
CCAAAAGACCGTCACGTCGCTGGCGCTGGCGTCGAACGGCGAGCGCCTGC
TCTCCGGTGCGCTGGACGGCCACATGAAGGTATTCGAAACGACCGGCTGG
AACATGGTCTCGGGCTCCAAGTACCCGTCCCCCATTCTCTCCCTTCGCGC
GATCACATCGGGCATCGCCCAGGAGGACAAGCACATTGCCGTTGGTATGC
AGTCTGGTCTTCTGTCGATCAAGACCCGCCTGTCCGGACAACAGAAGATC
CGTGAGCGCGAGCGCCGCAAGGAGATGCAGGCGCTGCTGGAAGGCAAGCT
GGAAGAGCACGACCGGAAGGCGGCCAAGCAAAAGAAGCAGCGCGGATCCG
GATGGGAGAAGCGCCTGCGCGGACAGGACTTTGTCGGTGAGGGCGTGGAC
ATTGTGATCGAGGGGCGGGACCTCAAGAAGCGGAAGAAGGAGCAACCGTG
GGAACTCGACCTGCGCAAGGCGAAGTACTCGGCGGCCCTGGACCAGGTGC
TGCGGTCGAACGACAAGACAGCACAATTGACGCTATTGACGGCGCTGCGG
CATCGGTCCGCGCTGCGGGCGTCCCTGCAGAATCGCGACGAGGTGACGCT
GCAGCCGGTGCTGCAATGGGTGCACAAGAACATCACGGAGCCGCGACTGG
TGCAGCTGAGTGTGGAGGTGGCGATGAACGTGCTGGATATCTACTCGGGC
AACCTGGGCCAGTCGGCGCAGATCGACAAGATGGTGGAGCGACTGCACCG
GCGAGTGCGCGACGAGGTGGAGATGGCGCATCAAGCGTACCAGACGAAGG
GAATGTTGGAGATGCTTGCTGCATGA
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Coding sequence (CDS) from alignment at ch4:1209926..1211551-

>KYF_004659-T1 ID=KYF_004659-T1|Name=KYF_004659-T1|organism=Aspergillus niger KYF3|type=CDS|length=1626bp|location=Sequence derived from alignment at ch4:1209926..1211551- (Aspergillus niger KYF3)
ATGGCTGCCCCCGTCCTCCCTCTGCAGCAGGTCAAGCTGCCGGCGCTGCC
CTCGACCCGTTTGACGCCGGAGCAGCAATATTGGAAAACATTCAAGAATC
CTCTCCTCATCCCCTCGCCAGCCAATGGCCCCGTCAACCTCATCACGCAA
CCCTCCGCTCCCTCCTCTGCCTCCGCCTTCCCTTCCCTCACCCAACCCCC
CGATGTGTTCACCGTGACCACCGGCGCCCGCGTCCAGATCTACTCCATCC
GCACTCGCAAACTCCTCCGCACAATCACCCGCTTCGATGATACGGTACGA
GGCACAGATGTCCGTCCCGACGGGCGAGTCATCGCCGTTGGTGACGACTC
TGGTACGGTGCAGGTGTTCGACGTGAGCTCCCGTGCCATCTTGAAGACAT
GGAAGGATCACAAGCAGCCCGTCTGGGTCACGAAATTCTCTCCCAGCGAC
CCTACATGCGTCATGACCGCCAGTGACGATCGGACGGTACGACTGTGGGA
TCTGCCCAGCGAGAACAGCCAGAAGGTCTTCACTGGCCATACCGATTACG
TGCGCAGCGGTGCATTTATGCCGGGGTCTCTGGCCTCCTCCGGCCTGGTG
GTCTCTGGTAGTTACGACCGGACCGTGCGACTGTGGGATCCTCGCGTTGA
AAACCGGTCCGCCATGACATTCAAGATGGGCGCAGCGATTGAGACGGTGC
TCCCCATGCCCACGGGCACGACGGTGCTTGCGGCGGCCGACAACAAGATC
GCGGTGCTGGATATCGTGGCCGGTAAGCCCCTGCACATGATTCAGAGCCA
CCAAAAGACCGTCACGTCGCTGGCGCTGGCGTCGAACGGCGAGCGCCTGC
TCTCCGGTGCGCTGGACGGCCACATGAAGGTATTCGAAACGACCGGCTGG
AACATGGTCTCGGGCTCCAAGTACCCGTCCCCCATTCTCTCCCTTCGCGC
GATCACATCGGGCATCGCCCAGGAGGACAAGCACATTGCCGTTGGTATGC
AGTCTGGTCTTCTGTCGATCAAGACCCGCCTGTCCGGACAACAGAAGATC
CGTGAGCGCGAGCGCCGCAAGGAGATGCAGGCGCTGCTGGAAGGCAAGCT
GGAAGAGCACGACCGGAAGGCGGCCAAGCAAAAGAAGCAGCGCGGATCCG
GATGGGAGAAGCGCCTGCGCGGACAGGACTTTGTCGGTGAGGGCGTGGAC
ATTGTGATCGAGGGGCGGGACCTCAAGAAGCGGAAGAAGGAGCAACCGTG
GGAACTCGACCTGCGCAAGGCGAAGTACTCGGCGGCCCTGGACCAGGTGC
TGCGGTCGAACGACAAGACAGCACAATTGACGCTATTGACGGCGCTGCGG
CATCGGTCCGCGCTGCGGGCGTCCCTGCAGAATCGCGACGAGGTGACGCT
GCAGCCGGTGCTGCAATGGGTGCACAAGAACATCACGGAGCCGCGACTGG
TGCAGCTGAGTGTGGAGGTGGCGATGAACGTGCTGGATATCTACTCGGGC
AACCTGGGCCAGTCGGCGCAGATCGACAAGATGGTGGAGCGACTGCACCG
GCGAGTGCGCGACGAGGTGGAGATGGCGCATCAAGCGTACCAGACGAAGG
GAATGTTGGAGATGCTTGCTGCATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005730nucleolus
Vocabulary: Biological Process
TermDefinition
GO:0006364rRNA processing
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_004659KYF_004659Aspergillus niger KYF3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_004659-T1.cdsKYF_004659-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_004659-T1.exon1KYF_004659-T1.exon1Aspergillus niger KYF3exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_004659-T1KYF_004659-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09261MMR
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR018983
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefInterPro:IPR020472
DBxrefPFAM:PF00400
DBxrefPFAM:PF09384
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:1209926..1211551 -
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