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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1277611..1279010+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_004685-T1 ID=KYF_004685-T1|Name=KYF_004685-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1400bp|location=Sequence derived from alignment at ch4:1277611..1279010+ (Aspergillus niger KYF3)
ATGCGTCGGTCTGCCCGGCAGGACGCCTCTGAACTTGCTCAAGAGCATGA
ACTAAGATCTAATACTGACGTTTATCACACCGATCAGCCGGCGGATGGGC
CCGGTGTCAGTCTAGCCTTCCCTGAAGGTGGCCGAGAGGCATGGATGTGC
CTTTTGGGATCCTATTTGATAATGTTCCCATCATTTGGCTTTGAAACAGC
AGGTACGCCAAGCTTTTCATGATTCCATTTACAGCACTAGATAAGTGGGG
TTATCAAACAACTGACATGAATACTCTAGTTGGCACTGTTCAGGACTACA
TCAGCGAGCACCAGCTTGCCGAATATAGCGTCCGCGATGTTGGCTGGATC
ACCGCACTTTTCGTGTTTCTAACTCTATTTCTTGGAGTTCAGGTCGGACC
ACTGTTCGATCGATACGGGCCTCGAATCTTATTAACATGCGGATCCGCAG
CCAGCTTCACTTCCTATATGTTACTAGCTGAGTGTACAAAATACTGGCAC
TTCATCCTGTGCCTATCCATTCTCGGAGGTATAGCTTCAGCAATTGTTAC
AACAGTCTCAATTTCAGTCCTGAGCCACTGGTTCCACCGCCGACGCGCCC
TCGCATCAGGCATTTGTATGGGCGGATCATCAGCGGGAGGCGCTATCATC
CCACTACTTCTACGGACCCTGTTCTCGAGATATGGCTGGACGTGGTCTAT
CCGAGTTATCGCCTTTCTAGCACTAGGATGCTATACAGCAGGAATCATCC
TAGTCAAAGGCCGCCTACCAACTGGCAGCAGGAGTAAAGTGACGATCGAC
TTTCGGGCCTTCCGGTCCCCTCGGCTTTTTTTCTTAACTGTGGCGGTCTT
CTCCTTTGAGTTCATCATCTTCGGCTGCGCGGCACTATTACCAACATACG
TCCGCTTCGCTGGCTTCTCAGTAGACGTACAATTTTACTCGCTCACAGTC
CTGAACAGTATGAGCTTGCTGGGAAGAGTCCTTCCCGGATTTGCGGCTGA
CCAAATCGGGCGTTTCAACATCCTGCTCTGCCTCGTCGTGATCACGTTAA
TAATAATGGCAACAGTCTGGCTGCCTTTTGGCTCTCATGATGAGAAGACC
CTATATAGCGTGGTGGCTATCTTTGGATTTGGCTCTGGGGGTTGGATCTC
CCTTGCTCCTGTATGTGCTGGCCAGCTCTGTAGGACTGAAGAGTATGGAC
GGTTCTACGGTACCCTGTATTCTGTGGCTTCGTTCGGAGTTTTACTCACT
GTTCCCGTCGGAGGTGATTTGCTGCAATCAACCACACCTCAGATTCTCAT
TGGGTTTTATTCAGCGGTGCTCTTGGTTGGGCTTATTGGTCTAATATTGT
CTCGATGGGCTCTGCTGGACTGGAACTGGAAGTGGAAGGTTAAAGTGTAA
back to topCoding sequence (CDS) from alignment at ch4:1277611..1279010+ >KYF_004685-T1 ID=KYF_004685-T1|Name=KYF_004685-T1|organism=Aspergillus niger KYF3|type=CDS|length=2646bp|location=Sequence derived from alignment at ch4:1277611..1279010+ (Aspergillus niger KYF3)
ATGCGTCGGTCTGCCCGGCAGGACGCCTCTGAACTTGCTCAAGAGCATGA
ACTAAGATCTAATACTGACGTTTATCACACCGATCAGCCGGCGGATGGGC
CCGGTGTCAGTCTAGCCTTCCCTGAAGGTGGCCGAGAGGCATGGATGTGC
CTTTTGGGATCCTATTTGATAATGTTCCCATCATTTGGCTTTGAAACAGC
AGTTGGCACTGTTCAGGACTACATCAGCGAGCACCAGCTTGCCGAATATA
GCGTCCGCGATGTTGGCTGGATCACCGCACTTTTCGTGTTTCTAACTCTA
TTTCTTGGAGTTCAGGTCGGACCACTGTTCGATCGATACGGGCCTCGAAT
CTTATTAACATGCGGATCCGCAGCCAGCTTCACTTCCTATATGTTACTAG
CTGAGTGTACAAAATACTGGCACTTCATCCTGTGCCTATCCATTCTCGGA
GGTATAGCTTCAGCAATTGTTACAACAGTCTCAATTTCAGTCCTGAGCCA
CTGGTTCCACCGCCGACGCGCCCTCGCATCAGGCATTTGTATGGGCGGAT
CATCAGCGGGAGGCGCTATCATCCCACTACTTCTACGGACCCTGTTCTCG
AGATATGGCTGGACGTGGTCTATCCGAGTTATCGCCTTTCTAGCACTAGG
ATGCTATACAGCAGGAATCATCCTAGTCAAAGGCCGCCTACCAACTGGCA
GCAGGAGTAAAGTGACGATCGACTTTCGGGCCTTCCGGTCCCCTCGGCTT
TTTTTCTTAACTGTGGCGGTCTTCTCCTTTGAGTTCATCATCTTCGGCTG
CGCGGCACTATTACCAACATACGTCCGCTTCGCTGGCTTCTCAGTAGACG
TACAATTTTACTCGCTCACAGTCCTGAACAGTATGAGCTTGCTGGGAAGA
GTCCTTCCCGGATTTGCGGCTGACCAAATCGGGCGTTTCAACATCCTGCT
CTGCCTCGTCGTGATCACGTTAATAATAATGGCAACAGTCTGGCTGCCTT
TTGGCTCTCATGATGAGAAGACCCTATATAGCGTGGTGGCTATCTTTGGA
TTTGGCTCTGGGGGTTGGATCTCCCTTGCTCCTGTATGTGCTGGCCAGCT
CTGTAGGACTGAAGAGTATGGACGGTTCTACGGTACCCTGTATTCTGTGG
CTTCGTTCGGAGTTTTACTCACTGTTCCCGTCGGAGGTGATTTGCTGCAA
TCAACCACACCTCAGATTCTCATTGGGTTTTATTCAGCGGTGCTCTTGGT
TGGGCTTATTGGTCTAATATTGTCTCGATGGGCTCTGCTGGACTGGAACT
GGAAGTGGAAGGTTAAAGTGTAAATGCGTCGGTCTGCCCGGCAGGACGCC
TCTGAACTTGCTCAAGAGCATGAACTAAGATCTAATACTGACGTTTATCA
CACCGATCAGCCGGCGGATGGGCCCGGTGTCAGTCTAGCCTTCCCTGAAG
GTGGCCGAGAGGCATGGATGTGCCTTTTGGGATCCTATTTGATAATGTTC
CCATCATTTGGCTTTGAAACAGCAGTTGGCACTGTTCAGGACTACATCAG
CGAGCACCAGCTTGCCGAATATAGCGTCCGCGATGTTGGCTGGATCACCG
CACTTTTCGTGTTTCTAACTCTATTTCTTGGAGTTCAGGTCGGACCACTG
TTCGATCGATACGGGCCTCGAATCTTATTAACATGCGGATCCGCAGCCAG
CTTCACTTCCTATATGTTACTAGCTGAGTGTACAAAATACTGGCACTTCA
TCCTGTGCCTATCCATTCTCGGAGGTATAGCTTCAGCAATTGTTACAACA
GTCTCAATTTCAGTCCTGAGCCACTGGTTCCACCGCCGACGCGCCCTCGC
ATCAGGCATTTGTATGGGCGGATCATCAGCGGGAGGCGCTATCATCCCAC
TACTTCTACGGACCCTGTTCTCGAGATATGGCTGGACGTGGTCTATCCGA
GTTATCGCCTTTCTAGCACTAGGATGCTATACAGCAGGAATCATCCTAGT
CAAAGGCCGCCTACCAACTGGCAGCAGGAGTAAAGTGACGATCGACTTTC
GGGCCTTCCGGTCCCCTCGGCTTTTTTTCTTAACTGTGGCGGTCTTCTCC
TTTGAGTTCATCATCTTCGGCTGCGCGGCACTATTACCAACATACGTCCG
CTTCGCTGGCTTCTCAGTAGACGTACAATTTTACTCGCTCACAGTCCTGA
ACAGTATGAGCTTGCTGGGAAGAGTCCTTCCCGGATTTGCGGCTGACCAA
ATCGGGCGTTTCAACATCCTGCTCTGCCTCGTCGTGATCACGTTAATAAT
AATGGCAACAGTCTGGCTGCCTTTTGGCTCTCATGATGAGAAGACCCTAT
ATAGCGTGGTGGCTATCTTTGGATTTGGCTCTGGGGGTTGGATCTCCCTT
GCTCCTGTATGTGCTGGCCAGCTCTGTAGGACTGAAGAGTATGGACGGTT
CTACGGTACCCTGTATTCTGTGGCTTCGTTCGGAGTTTTACTCACTGTTC
CCGTCGGAGGTGATTTGCTGCAATCAACCACACCTCAGATTCTCATTGGG
TTTTATTCAGCGGTGCTCTTGGTTGGGCTTATTGGTCTAATATTGTCTCG
ATGGGCTCTGCTGGACTGGAACTGGAAGTGGAAGGTTAAAGTGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005887 | integral component of plasma membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1277611..1279010 + |
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