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KYF_004690-T1, KYF_004690-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_004690-T1
Unique NameKYF_004690-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:1286371..1286826+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_004690-T1 ID=KYF_004690-T1|Name=KYF_004690-T1|organism=Aspergillus niger KYF3|type=mRNA|length=456bp|location=Sequence derived from alignment at ch4:1286371..1286826+ (Aspergillus niger KYF3)
ATGCCCGCACACCTGGGCCACGAGGAGGTACTTCACCCCCACAACCACAA
CAACACCCCCAAAACCAATACTGACCAAACGAACTAGTTCTTCACCTCCC
TCACCACCCTCCTAAGCACCACATCCCAAAAAACCCGCGGATCCGTGTAC
CTCACCCAGAAGCCTCTCCTCGACTCTACCAACACCCAGTCCCAACCATC
CATTCTCATCCGCGCGACAGACGGCAACACCAACGCCCCGAACCCCAAGA
CGGCAGAGGCCAAGAAGAAGGTGTCGAAGGCGACAGCAGCATCGAAAGTG
AAGATCTCGACGGTCGTGAGCCCTGATGACCTGGAGGCGTTCTATGCGCG
GTATGCGGAGGTGTGTAAGGCTGGGATGACGGGGTTGAAGAAGAGGGATC
GGAAGAAGGGCAAGGCGAAGGGGAAGAAGGAGGGTGGGAAGGTTGTTAAG
GGGTGA
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Coding sequence (CDS) from alignment at ch4:1286371..1286826+

>KYF_004690-T1 ID=KYF_004690-T1|Name=KYF_004690-T1|organism=Aspergillus niger KYF3|type=CDS|length=792bp|location=Sequence derived from alignment at ch4:1286371..1286826+ (Aspergillus niger KYF3)
ATGCCCGCACACCTGGGCCACGAGGAGTTCTTCACCTCCCTCACCACCCT
CCTAAGCACCACATCCCAAAAAACCCGCGGATCCGTGTACCTCACCCAGA
AGCCTCTCCTCGACTCTACCAACACCCAGTCCCAACCATCCATTCTCATC
CGCGCGACAGACGGCAACACCAACGCCCCGAACCCCAAGACGGCAGAGGC
CAAGAAGAAGGTGTCGAAGGCGACAGCAGCATCGAAAGTGAAGATCTCGA
CGGTCGTGAGCCCTGATGACCTGGAGGCGTTCTATGCGCGGTATGCGGAG
GTGTGTAAGGCTGGGATGACGGGGTTGAAGAAGAGGGATCGGAAGAAGGG
CAAGGCGAAGGGGAAGAAGGAGGGTGGGAAGGTTGTTAAGGGGTGAATGC
CCGCACACCTGGGCCACGAGGAGTTCTTCACCTCCCTCACCACCCTCCTA
AGCACCACATCCCAAAAAACCCGCGGATCCGTGTACCTCACCCAGAAGCC
TCTCCTCGACTCTACCAACACCCAGTCCCAACCATCCATTCTCATCCGCG
CGACAGACGGCAACACCAACGCCCCGAACCCCAAGACGGCAGAGGCCAAG
AAGAAGGTGTCGAAGGCGACAGCAGCATCGAAAGTGAAGATCTCGACGGT
CGTGAGCCCTGATGACCTGGAGGCGTTCTATGCGCGGTATGCGGAGGTGT
GTAAGGCTGGGATGACGGGGTTGAAGAAGAGGGATCGGAAGAAGGGCAAG
GCGAAGGGGAAGAAGGAGGGTGGGAAGGTTGTTAAGGGGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005786signal recognition particle, endoplasmic reticulum targeting
GO:0048500signal recognition particle
Vocabulary: Molecular Function
TermDefinition
GO:0030942endoplasmic reticulum signal peptide binding
GO:00083127S RNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006614SRP-dependent cotranslational protein targeting to membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_004690KYF_004690Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_004690-T1.exon1KYF_004690-T1.exon1Aspergillus niger KYF3exon
KYF_004690-T1.exon2KYF_004690-T1.exon2Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_004690-T1.cdsKYF_004690-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_004690-T1KYF_004690-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR003210
DBxrefInterPro:IPR009018
DBxrefPFAM:PF02290
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:1286371..1286826 +
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