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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1503100..1503648- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_004768-T1 ID=KYF_004768-T1|Name=KYF_004768-T1|organism=Aspergillus niger KYF3|type=mRNA|length=549bp|location=Sequence derived from alignment at ch4:1503100..1503648- (Aspergillus niger KYF3)
ATGTCTTTCCAGAAGCCTGAGAAGGATTTCGGCGAGGGCCCTGTACGTCT
ACCACCATACCATTATTATTATCATCATACATATACATGTCTCAATGCGA
TGGATATGGACATGGTATTTATATATATTCAATTGCGACAGTACTAACAA
GCAATTCCTGCTATTATAGAAGGTCCACAAGATCCGTATCACCCTCACCT
CTCGCAAGGTCGCCTCCCTTGAGAAGGTGTGCTCGGAGCTGATCGACCGT
GCTCGCTCCAAGTCCCTCCAGGTCAAGGGTCCCGTCCGTCTTCCCACCAA
GACCCTTCACATCTCGACCCGTAAGACCCCCAACGGTGAGGGTTCCAAGA
CCTGGGACAAGTACGAGATGCGCATCCACAAGCGTCTCATCGAGTAAGCA
CCTTCCACCTCCTCCTTTGAAGATGTTGGAAGGGAAAGGATGGAAAGCTA
ATATCTGTGTTCAGCCTCCTCGCCCCCACCGAGACCGTCAAGCAGATCAT
CATCAACATCGAGGCTGGTGTTGAGGTTGAGGTCACCATTGCTGCTTAA back to topCoding sequence (CDS) from alignment at ch4:1503100..1503648- >KYF_004768-T1 ID=KYF_004768-T1|Name=KYF_004768-T1|organism=Aspergillus niger KYF3|type=CDS|length=1053bp|location=Sequence derived from alignment at ch4:1503100..1503648- (Aspergillus niger KYF3)
CCTCCTCGCCCCCACCGAGACCGTCAAGCAGATCATCATCAACATCGAGG
CTGGTGTTGAGGTTGAGGTCACCATTGCTGCTTAAAAGGTCCACAAGATC
CGTATCACCCTCACCTCTCGCAAGGTCGCCTCCCTTGAGAAGGTGTGCTC
GGAGCTGATCGACCGTGCTCGCTCCAAGTCCCTCCAGGTCAAGGGTCCCG
TCCGTCTTCCCACCAAGACCCTTCACATCTCGACCCGTAAGACCCCCAAC
GGTGAGGGTTCCAAGACCTGGGACAAGTACGAGATGCGCATCCACAAGCG
TCTCATCGAATGTCTTTCCAGAAGCCTGAGAAGGATTTCGGCGAGGGCCC
TCCTCCTCGCCCCCACCGAGACCGTCAAGCAGATCATCATCAACATCGAG
GCTGGTGTTGAGGTTGAGGTCACCATTGCTGCTTAAAAGGTCCACAAGAT
CCGTATCACCCTCACCTCTCGCAAGGTCGCCTCCCTTGAGAAGGTGTGCT
CGGAGCTGATCGACCGTGCTCGCTCCAAGTCCCTCCAGGTCAAGGGTCCC
GTCCGTCTTCCCACCAAGACCCTTCACATCTCGACCCGTAAGACCCCCAA
CGGTGAGGGTTCCAAGACCTGGGACAAGTACGAGATGCGCATCCACAAGC
GTCTCATCGAATGTCTTTCCAGAAGCCTGAGAAGGATTTCGGCGAGGGCC
CTCCTCCTCGCCCCCACCGAGACCGTCAAGCAGATCATCATCAACATCGA
GGCTGGTGTTGAGGTTGAGGTCACCATTGCTGCTTAAAAGGTCCACAAGA
TCCGTATCACCCTCACCTCTCGCAAGGTCGCCTCCCTTGAGAAGGTGTGC
TCGGAGCTGATCGACCGTGCTCGCTCCAAGTCCCTCCAGGTCAAGGGTCC
CGTCCGTCTTCCCACCAAGACCCTTCACATCTCGACCCGTAAGACCCCCA
ACGGTGAGGGTTCCAAGACCTGGGACAAGTACGAGATGCGCATCCACAAG
CGTCTCATCGAATGTCTTTCCAGAAGCCTGAGAAGGATTTCGGCGAGGGC
CCT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0015935 | small ribosomal subunit |
| GO:0005840 | ribosome |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003723 | RNA binding |
| GO:0003735 | structural constituent of ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09265CFP |
| DBxref | InterPro:IPR018268 |
| DBxref | InterPro:IPR036838 |
| DBxref | InterPro:IPR005729 |
| DBxref | InterPro:IPR027486 |
| DBxref | InterPro:IPR001848 |
| DBxref | PFAM:PF00338 |
| Product | 40S ribosomal protein S20 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1503100..1503648 - |
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