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KYF_004841-T1, KYF_004841-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_004841-T1
Unique NameKYF_004841-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:1720323..1720935+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_004841-T1 ID=KYF_004841-T1|Name=KYF_004841-T1|organism=Aspergillus niger KYF3|type=mRNA|length=613bp|location=Sequence derived from alignment at ch4:1720323..1720935+ (Aspergillus niger KYF3)
ATGTCTACAGAAATGGAAGTCGACCCTCCCGTGGCGCAGGAGGAGGAGGT
CCCCGCGCAGTCGGGCAACAATACCTCTGATCCGAGAACGCAAGCGTCAG
CTGTTGCAGTGCGCAGTATCGAAGGATGGATCATCATCGCGACCAATATT
CATGAAGAGGCCTCTGAGGAGGACGTGACGGATCTGTTTGCTGAATATGG
AGAGATCAAGAACTTCAATTTGAACCTCGATCGCCGGACGGGTTATGTGA
AGGTAGGTGTCTTTAGCTCTTCATCAACGTGGGAATTCATTCTATGATTT
TGCTGGATATATTTCCATGCTCAATCTTGATAAAGTATACTGCTACTGAG
CATAAGATGAGATACTAAGTGGCTTTTGTCAGGGTTACGCGTTGATCGAA
TACTCCACCCTCCCCGAAGCCTCGGAAGCCATCAAGGCTTTGAACGGATC
CAAATTGCTGGACCAGACAATCCAGGTCGACTTCGCGTTTGTCCGGCCAC
CCCCATCAAACAAAGGAAAGAACGCTGGACAAAGAGGTGGCCGTGGTGGA
CGGGGACGCAGCAGGAGCCGGGATAGGAGTCGCAGCCCTGGAGCGGAGGA
GGCTAGAGACTAG
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Coding sequence (CDS) from alignment at ch4:1720323..1720935+

>KYF_004841-T1 ID=KYF_004841-T1|Name=KYF_004841-T1|organism=Aspergillus niger KYF3|type=CDS|length=966bp|location=Sequence derived from alignment at ch4:1720323..1720935+ (Aspergillus niger KYF3)
ATGTCTACAGAAATGGAAGTCGACCCTCCCGTGGCGCAGGAGGAGGAGGT
CCCCGCGCAGTCGGGCAACAATACCTCTGATCCGAGAACGCAAGCGTCAG
CTGTTGCAGTGCGCAGTATCGAAGGATGGATCATCATCGCGACCAATATT
CATGAAGAGGCCTCTGAGGAGGACGTGACGGATCTGTTTGCTGAATATGG
AGAGATCAAGAACTTCAATTTGAACCTCGATCGCCGGACGGGTTATGTGA
AGGGTTACGCGTTGATCGAATACTCCACCCTCCCCGAAGCCTCGGAAGCC
ATCAAGGCTTTGAACGGATCCAAATTGCTGGACCAGACAATCCAGGTCGA
CTTCGCGTTTGTCCGGCCACCCCCATCAAACAAAGGAAAGAACGCTGGAC
AAAGAGGTGGCCGTGGTGGACGGGGACGCAGCAGGAGCCGGGATAGGAGT
CGCAGCCCTGGAGCGGAGGAGGCTAGAGACTAGATGTCTACAGAAATGGA
AGTCGACCCTCCCGTGGCGCAGGAGGAGGAGGTCCCCGCGCAGTCGGGCA
ACAATACCTCTGATCCGAGAACGCAAGCGTCAGCTGTTGCAGTGCGCAGT
ATCGAAGGATGGATCATCATCGCGACCAATATTCATGAAGAGGCCTCTGA
GGAGGACGTGACGGATCTGTTTGCTGAATATGGAGAGATCAAGAACTTCA
ATTTGAACCTCGATCGCCGGACGGGTTATGTGAAGGGTTACGCGTTGATC
GAATACTCCACCCTCCCCGAAGCCTCGGAAGCCATCAAGGCTTTGAACGG
ATCCAAATTGCTGGACCAGACAATCCAGGTCGACTTCGCGTTTGTCCGGC
CACCCCCATCAAACAAAGGAAAGAACGCTGGACAAAGAGGTGGCCGTGGT
GGACGGGGACGCAGCAGGAGCCGGGATAGGAGTCGCAGCCCTGGAGCGGA
GGAGGCTAGAGACTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003729mRNA binding
GO:0003676nucleic acid binding
GO:0003723RNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006396RNA processing
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_004841KYF_004841Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_004841-T1.exon1KYF_004841-T1.exon1Aspergillus niger KYF3exon
KYF_004841-T1.exon2KYF_004841-T1.exon2Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_004841-T1.cdsKYF_004841-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_004841-T1KYF_004841-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR033744
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefInterPro:IPR008111
DBxrefPFAM:PF00076
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:1720323..1720935 +
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