KYF_004976-T1, KYF_004976-T1 (mRNA) Aspergillus niger KYF3

Overview


Name	KYF_004976-T1
Unique Name	KYF_004976-T1
Type	mRNA
Organism	Aspergillus niger KYF3

Sequences

The following sequences are available for this feature:

mRNA from alignment at ch4:2223330..2224754+
coding sequence from alignment at ch4:2223330..2224754+

mRNA from alignment at ch4:2223330..2224754+

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>KYF_004976-T1 ID=KYF_004976-T1|Name=KYF_004976-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1425bp|location=Sequence derived from alignment at ch4:2223330..2224754+ (Aspergillus niger KYF3)
ATGTTGTTCCGCGCTGCGGTCCGTCAGTCCGCGCCCTTGAGGCGTCAGGC
CCTCACTCCTCTTGCTCGTCGCTCCGTCACCACCGACGCCGCCTCGTCGC
ATGCTGAAAATGTCCCCCAGGTTCGTTGAGAGCTCCCTGGATATCCCGGA
TTGACCTCCGCAATGGCCCTGGCTAATGCGATTTCCATCTATCTACAGGA
GGATGACAAGCCCTTCACTGTCCGCCTCTCCGACGAGAGCTTCGAGACCT
ACGAGATCGACCCTCCCCCGTACACCCTGGAGATCACCAAGAAGGAGCTC
AAGCAGATGTACTACGACATGGTTTCGATGAGGTATGGCCACCGTTTGGC
CCTTTGCTTTTTCTTTCCACAAGCCTCATGCAGAATCTAATCTATCGCTC
AGACGCATGGAGATGGCCGCCGACCGTCTTTACAAGGAGAAGAAGATCAG
AGGTTTCTGCCACTTGTCTACCGGTCAGGAAGCCGTCGCCACCGGTATCG
AGCACGCTATCACCCGCGACGACAAGGTCATCACTGCCTACCGTTGCCAC
GGTTTCGCCATGATGCGCGGTGGTACCGTCCGCTCCATCATCGGTGAGCT
GCTCGGTCGCCGTGAGGGTATCGCCTACGGAAAGGGTGGTTCCATGCACA
TGTTCGCCCCCAACTTCTACGGCGGTAACGGTATCGTCGGTGCCCAGGTC
CCCGTCGGTGCTGGTCTCGCTTTCGCCCAGCAGTACAACGAGGAGCCCAC
CACCAGTATCGTCCTCTACGGTGACGGTGCCTCCAACCAGGGTCAGGTCT
TCGAGGCCTTCAACATGGCCAAGCTGTGGAACCTCCCCGTTCTGTTCGGT
TGTGAGAGTAAGTCATAGTCCTCACGCCACTCCATCCAAGACAGCCAAAG
CTAATTCCTTTTCTACTAGACAACAAGTACGGTATGGGTACCTCCGCCGC
TCGCTCCTCCGCCTTGACCGAGTACTACAAGCGTGGTCAGTACATCCCTG
GTATCAAGGTCAACGGCATGGACGTCCTGGCCACCAAGGCCGCCGTCAAG
TACGGTAAGGACTGGGCCGTGGCCGGCAACGGCCCCCTGGTCTACGAGTA
CGTCACCTACCGTTACGGTGGTCACTCCATGTCCGACCCCGGTACCACCT
ACCGTAGCCGTGAGGAGATCCAGCGCATGCGCAGCACCAACGACCCCATC
GCCGGTCTCAAGCAGAAGATCCTCGACTGGAACGTCTGCTCCGAGGACGA
GCTCAAGTCCCTCGACAAGGCCGCTCGTGCCCACGTCGACGAGGAGGTCG
CCATCGCCGAGAAGATGCCCGCTCCCGAGAACACCTCCCGCATTCTCTTC
GAGGACATCTACGTCCGTGGCTCCGAGCCCAAGTGGATGCGTGGTCGCAC
TGTCGACGAGACCTTCTACTACTAG

Coding sequence (CDS) from alignment at ch4:2223330..2224754+

>KYF_004976-T1 ID=KYF_004976-T1|Name=KYF_004976-T1|organism=Aspergillus niger KYF3|type=CDS|length=4860bp|location=Sequence derived from alignment at ch4:2223330..2224754+ (Aspergillus niger KYF3)
ATGTTGTTCCGCGCTGCGGTCCGTCAGTCCGCGCCCTTGAGGCGTCAGGC
CCTCACTCCTCTTGCTCGTCGCTCCGTCACCACCGACGCCGCCTCGTCGC
ATGCTGAAAATGTCCCCCAGGAGGATGACAAGCCCTTCACTGTCCGCCTC
TCCGACGAGAGCTTCGAGACCTACGAGATCGACCCTCCCCCGTACACCCT
GGAGATCACCAAGAAGGAGCTCAAGCAGATGTACTACGACATGGTTTCGA
TGAGACGCATGGAGATGGCCGCCGACCGTCTTTACAAGGAGAAGAAGATC
AGAGGTTTCTGCCACTTGTCTACCGGTCAGGAAGCCGTCGCCACCGGTAT
CGAGCACGCTATCACCCGCGACGACAAGGTCATCACTGCCTACCGTTGCC
ACGGTTTCGCCATGATGCGCGGTGGTACCGTCCGCTCCATCATCGGTGAG
CTGCTCGGTCGCCGTGAGGGTATCGCCTACGGAAAGGGTGGTTCCATGCA
CATGTTCGCCCCCAACTTCTACGGCGGTAACGGTATCGTCGGTGCCCAGG
TCCCCGTCGGTGCTGGTCTCGCTTTCGCCCAGCAGTACAACGAGGAGCCC
ACCACCAGTATCGTCCTCTACGGTGACGGTGCCTCCAACCAGGGTCAGGT
CTTCGAGGCCTTCAACATGGCCAAGCTGTGGAACCTCCCCGTTCTGTTCG
GTTGTGAGAACAACAAGTACGGTATGGGTACCTCCGCCGCTCGCTCCTCC
GCCTTGACCGAGTACTACAAGCGTGGTCAGTACATCCCTGGTATCAAGGT
CAACGGCATGGACGTCCTGGCCACCAAGGCCGCCGTCAAGTACGGTAAGG
ACTGGGCCGTGGCCGGCAACGGCCCCCTGGTCTACGAGTACGTCACCTAC
CGTTACGGTGGTCACTCCATGTCCGACCCCGGTACCACCTACCGTAGCCG
TGAGGAGATCCAGCGCATGCGCAGCACCAACGACCCCATCGCCGGTCTCA
AGCAGAAGATCCTCGACTGGAACGTCTGCTCCGAGGACGAGCTCAAGTCC
CTCGACAAGGCCGCTCGTGCCCACGTCGACGAGGAGGTCGCCATCGCCGA
GAAGATGCCCGCTCCCGAGAACACCTCCCGCATTCTCTTCGAGGACATCT
ACGTCCGTGGCTCCGAGCCCAAGTGGATGCGTGGTCGCACTGTCGACGAG
ACCTTCTACTACTAGATGTTGTTCCGCGCTGCGGTCCGTCAGTCCGCGCC
CTTGAGGCGTCAGGCCCTCACTCCTCTTGCTCGTCGCTCCGTCACCACCG
ACGCCGCCTCGTCGCATGCTGAAAATGTCCCCCAGGAGGATGACAAGCCC
TTCACTGTCCGCCTCTCCGACGAGAGCTTCGAGACCTACGAGATCGACCC
TCCCCCGTACACCCTGGAGATCACCAAGAAGGAGCTCAAGCAGATGTACT
ACGACATGGTTTCGATGAGACGCATGGAGATGGCCGCCGACCGTCTTTAC
AAGGAGAAGAAGATCAGAGGTTTCTGCCACTTGTCTACCGGTCAGGAAGC
CGTCGCCACCGGTATCGAGCACGCTATCACCCGCGACGACAAGGTCATCA
CTGCCTACCGTTGCCACGGTTTCGCCATGATGCGCGGTGGTACCGTCCGC
TCCATCATCGGTGAGCTGCTCGGTCGCCGTGAGGGTATCGCCTACGGAAA
GGGTGGTTCCATGCACATGTTCGCCCCCAACTTCTACGGCGGTAACGGTA
TCGTCGGTGCCCAGGTCCCCGTCGGTGCTGGTCTCGCTTTCGCCCAGCAG
TACAACGAGGAGCCCACCACCAGTATCGTCCTCTACGGTGACGGTGCCTC
CAACCAGGGTCAGGTCTTCGAGGCCTTCAACATGGCCAAGCTGTGGAACC
TCCCCGTTCTGTTCGGTTGTGAGAACAACAAGTACGGTATGGGTACCTCC
GCCGCTCGCTCCTCCGCCTTGACCGAGTACTACAAGCGTGGTCAGTACAT
CCCTGGTATCAAGGTCAACGGCATGGACGTCCTGGCCACCAAGGCCGCCG
TCAAGTACGGTAAGGACTGGGCCGTGGCCGGCAACGGCCCCCTGGTCTAC
GAGTACGTCACCTACCGTTACGGTGGTCACTCCATGTCCGACCCCGGTAC
CACCTACCGTAGCCGTGAGGAGATCCAGCGCATGCGCAGCACCAACGACC
CCATCGCCGGTCTCAAGCAGAAGATCCTCGACTGGAACGTCTGCTCCGAG
GACGAGCTCAAGTCCCTCGACAAGGCCGCTCGTGCCCACGTCGACGAGGA
GGTCGCCATCGCCGAGAAGATGCCCGCTCCCGAGAACACCTCCCGCATTC
TCTTCGAGGACATCTACGTCCGTGGCTCCGAGCCCAAGTGGATGCGTGGT
CGCACTGTCGACGAGACCTTCTACTACTAGATGTTGTTCCGCGCTGCGGT
CCGTCAGTCCGCGCCCTTGAGGCGTCAGGCCCTCACTCCTCTTGCTCGTC
GCTCCGTCACCACCGACGCCGCCTCGTCGCATGCTGAAAATGTCCCCCAG
GAGGATGACAAGCCCTTCACTGTCCGCCTCTCCGACGAGAGCTTCGAGAC
CTACGAGATCGACCCTCCCCCGTACACCCTGGAGATCACCAAGAAGGAGC
TCAAGCAGATGTACTACGACATGGTTTCGATGAGACGCATGGAGATGGCC
GCCGACCGTCTTTACAAGGAGAAGAAGATCAGAGGTTTCTGCCACTTGTC
TACCGGTCAGGAAGCCGTCGCCACCGGTATCGAGCACGCTATCACCCGCG
ACGACAAGGTCATCACTGCCTACCGTTGCCACGGTTTCGCCATGATGCGC
GGTGGTACCGTCCGCTCCATCATCGGTGAGCTGCTCGGTCGCCGTGAGGG
TATCGCCTACGGAAAGGGTGGTTCCATGCACATGTTCGCCCCCAACTTCT
ACGGCGGTAACGGTATCGTCGGTGCCCAGGTCCCCGTCGGTGCTGGTCTC
GCTTTCGCCCAGCAGTACAACGAGGAGCCCACCACCAGTATCGTCCTCTA
CGGTGACGGTGCCTCCAACCAGGGTCAGGTCTTCGAGGCCTTCAACATGG
CCAAGCTGTGGAACCTCCCCGTTCTGTTCGGTTGTGAGAACAACAAGTAC
GGTATGGGTACCTCCGCCGCTCGCTCCTCCGCCTTGACCGAGTACTACAA
GCGTGGTCAGTACATCCCTGGTATCAAGGTCAACGGCATGGACGTCCTGG
CCACCAAGGCCGCCGTCAAGTACGGTAAGGACTGGGCCGTGGCCGGCAAC
GGCCCCCTGGTCTACGAGTACGTCACCTACCGTTACGGTGGTCACTCCAT
GTCCGACCCCGGTACCACCTACCGTAGCCGTGAGGAGATCCAGCGCATGC
GCAGCACCAACGACCCCATCGCCGGTCTCAAGCAGAAGATCCTCGACTGG
AACGTCTGCTCCGAGGACGAGCTCAAGTCCCTCGACAAGGCCGCTCGTGC
CCACGTCGACGAGGAGGTCGCCATCGCCGAGAAGATGCCCGCTCCCGAGA
ACACCTCCCGCATTCTCTTCGAGGACATCTACGTCCGTGGCTCCGAGCCC
AAGTGGATGCGTGGTCGCACTGTCGACGAGACCTTCTACTACTAGATGTT
GTTCCGCGCTGCGGTCCGTCAGTCCGCGCCCTTGAGGCGTCAGGCCCTCA
CTCCTCTTGCTCGTCGCTCCGTCACCACCGACGCCGCCTCGTCGCATGCT
GAAAATGTCCCCCAGGAGGATGACAAGCCCTTCACTGTCCGCCTCTCCGA
CGAGAGCTTCGAGACCTACGAGATCGACCCTCCCCCGTACACCCTGGAGA
TCACCAAGAAGGAGCTCAAGCAGATGTACTACGACATGGTTTCGATGAGA
CGCATGGAGATGGCCGCCGACCGTCTTTACAAGGAGAAGAAGATCAGAGG
TTTCTGCCACTTGTCTACCGGTCAGGAAGCCGTCGCCACCGGTATCGAGC
ACGCTATCACCCGCGACGACAAGGTCATCACTGCCTACCGTTGCCACGGT
TTCGCCATGATGCGCGGTGGTACCGTCCGCTCCATCATCGGTGAGCTGCT
CGGTCGCCGTGAGGGTATCGCCTACGGAAAGGGTGGTTCCATGCACATGT
TCGCCCCCAACTTCTACGGCGGTAACGGTATCGTCGGTGCCCAGGTCCCC
GTCGGTGCTGGTCTCGCTTTCGCCCAGCAGTACAACGAGGAGCCCACCAC
CAGTATCGTCCTCTACGGTGACGGTGCCTCCAACCAGGGTCAGGTCTTCG
AGGCCTTCAACATGGCCAAGCTGTGGAACCTCCCCGTTCTGTTCGGTTGT
GAGAACAACAAGTACGGTATGGGTACCTCCGCCGCTCGCTCCTCCGCCTT
GACCGAGTACTACAAGCGTGGTCAGTACATCCCTGGTATCAAGGTCAACG
GCATGGACGTCCTGGCCACCAAGGCCGCCGTCAAGTACGGTAAGGACTGG
GCCGTGGCCGGCAACGGCCCCCTGGTCTACGAGTACGTCACCTACCGTTA
CGGTGGTCACTCCATGTCCGACCCCGGTACCACCTACCGTAGCCGTGAGG
AGATCCAGCGCATGCGCAGCACCAACGACCCCATCGCCGGTCTCAAGCAG
AAGATCCTCGACTGGAACGTCTGCTCCGAGGACGAGCTCAAGTCCCTCGA
CAAGGCCGCTCGTGCCCACGTCGACGAGGAGGTCGCCATCGCCGAGAAGA
TGCCCGCTCCCGAGAACACCTCCCGCATTCTCTTCGAGGACATCTACGTC
CGTGGCTCCGAGCCCAAGTGGATGCGTGGTCGCACTGTCGACGAGACCTT
CTACTACTAG

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Cellular Component**
Term	Definition
GO:0043231	intracellular membrane-bounded organelle

Vocabulary: **Molecular Function**
Term	Definition
GO:0016624	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
GO:0004739	pyruvate dehydrogenase (acetyl-transferring) activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006086	acetyl-CoA biosynthetic process from pyruvate

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
PDA1	KYF_004976	Aspergillus niger KYF3	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KYF_004976-T1.exon1	KYF_004976-T1.exon1	Aspergillus niger KYF3	exon
KYF_004976-T1.exon2	KYF_004976-T1.exon2	Aspergillus niger KYF3	exon
KYF_004976-T1.exon3	KYF_004976-T1.exon3	Aspergillus niger KYF3	exon
KYF_004976-T1.exon4	KYF_004976-T1.exon4	Aspergillus niger KYF3	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KYF_004976-T1.cds	KYF_004976-T1.cds	Aspergillus niger KYF3	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
KYF_004976-T1	KYF_004976-T1-protein	Aspergillus niger KYF3	polypeptide

Properties


Property Name	Value
Note	BUSCO:EOG09262Q8D
DBxref	InterPro:IPR029061
DBxref	InterPro:IPR001017
DBxref	InterPro:IPR017597
DBxref	PFAM:PF00676
Product	alpha subunit of pyruvate dehydrogenase

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF3	2020-10-09

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ch4	supercontig	ch4:2223330..2224754 +

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KYF_004976-T1, KYF_004976-T1 (mRNA) Aspergillus niger KYF3