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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2228024..2229589- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_004978-T1 ID=KYF_004978-T1|Name=KYF_004978-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1566bp|location=Sequence derived from alignment at ch4:2228024..2229589- (Aspergillus niger KYF3)
ATGAGGAACAGGGCGACCCAGCATCTGAGCAAGCCGGTAAGGACATTTCT
TTCTTTTTTCTTGCTCTGTCTCCTTGCTCATCTCGCCGCAATTGCTAATT
CTGGTATGCTTTGCTTAGAAAGTCCGGCAATCATGGAGCAAATGGAACCT
ATATAACATGAAGCGGTTCTCCGTCAAGAACCCCATGTTCCGAACTCATT
TCCAGCAAAAATGGGATGCCAAGTCGATAGCCCGTGGATATCATGGCGAA
CAAGTCTCCGAGAAGCACTGGGTGCGCATGTTTTCTCCCCGCATTCGTAG
CGTGGTGCCCATGGATCCCGCCAAACTGGCCAAAGACGATGGTTCTGCCT
TGTCTGCCGGCCGTGGTATGGGTGTTGAGTCGCGTTCTGACACAGCCGCG
CATCTTAAACTCTCAAAATACGAGAGAGCCGACGCCGACCAACTGGAAAG
GCCTTTTCCCTATACACAGGCGACTTTTGCTCCCCTAGAGCGCCGGCTGG
ATGTGGCCGTCTTCCGGGCTATGTTCGCCAGCAGTACGAGGCAGGCGCGG
CAATTTGTCATTCATGGAGCGGTCACTGTCAATGGAAAGAAGGTGAGTGT
GCCTGGGACGCTGCATGGTCCTTTTCATTTAAGCGCTGCCATCGAAAGCT
GATCGGTTACGTTTGACAGATGAGATACCCCGGTTACCTGCTCAACCCTG
GTGATCTTTTCCAGGTTGAACCCGAGCGTGTCATGTTTGCCACCGGTGCT
CCAAAGGACAAGTACGACCGGCGCGCGGCTCGTGTTGCTGAGAAGGAGGC
AGAGAAGGAGGCGGAGAAAAAGGCCGAGGAAGCCGAGGAAGCCGAGGAAG
CCAAGGAAGAGAGTGAGGCCAAGGAGGAGGATAAGCAAGAGGTCCAGTCC
CCCCGCCAGACCTTGCAGGCTATGCTGTCGCAGGCCAAGAACATCATGGC
CGATAGCAAGTCGGTGCTTCCCGCCAAGCGGAAGCAGGAGCTGCGTGGAT
TCCAGAAGGCCGTCCGTCGCGTGCTGTCTCGCTCTGATTCAAACGTCCTC
GCCGACAACCTGGAGGCTCAGTTTTCCGAGCTGACTCTGCTGCTCAAGGC
CAAGAAGGCAGAGAAGACGAAGAAGTCGGGCAACAAGGAAAGACAGGATA
CCACATCTGCCAACTCCGAGAAGTCCGCCGATACCAAGGCTGCTACTGAG
GTAGACAGCGAGACTCAGCCCGGCGATAAGCTGTCCGAGGCATTCCGCCA
GGCTGCTGAGAACCCCGAACAGGAGGTGGATACGTCCGAGTTGACCGATG
AGGAGTTCAAGATTCTTCGTCGTGCCCTTATCCAGATGCGTGATAACCCG
ATCGATCATTCGAAGCCGTACGCTACGCCCTGGCGGCCGCGGGACTTCAT
GAGCGCCTTTGCCACGATCCCTCGCTACCTGGAAGTGAACCCTAAGGCTT
GTGCGGCCGTCTACCTGCGCCACCCCGTTGTTCGTCCGGGCTTGTCGGAG
GTTCCATCGCCCTTCAACCTTGCGACTGGAGCGCTGGCATACCACTGGTA
CCTGAGACGGCGGTAG back to topCoding sequence (CDS) from alignment at ch4:2228024..2229589- >KYF_004978-T1 ID=KYF_004978-T1|Name=KYF_004978-T1|organism=Aspergillus niger KYF3|type=CDS|length=4221bp|location=Sequence derived from alignment at ch4:2228024..2229589- (Aspergillus niger KYF3)
ATGAGATACCCCGGTTACCTGCTCAACCCTGGTGATCTTTTCCAGGTTGA
ACCCGAGCGTGTCATGTTTGCCACCGGTGCTCCAAAGGACAAGTACGACC
GGCGCGCGGCTCGTGTTGCTGAGAAGGAGGCAGAGAAGGAGGCGGAGAAA
AAGGCCGAGGAAGCCGAGGAAGCCGAGGAAGCCAAGGAAGAGAGTGAGGC
CAAGGAGGAGGATAAGCAAGAGGTCCAGTCCCCCCGCCAGACCTTGCAGG
CTATGCTGTCGCAGGCCAAGAACATCATGGCCGATAGCAAGTCGGTGCTT
CCCGCCAAGCGGAAGCAGGAGCTGCGTGGATTCCAGAAGGCCGTCCGTCG
CGTGCTGTCTCGCTCTGATTCAAACGTCCTCGCCGACAACCTGGAGGCTC
AGTTTTCCGAGCTGACTCTGCTGCTCAAGGCCAAGAAGGCAGAGAAGACG
AAGAAGTCGGGCAACAAGGAAAGACAGGATACCACATCTGCCAACTCCGA
GAAGTCCGCCGATACCAAGGCTGCTACTGAGGTAGACAGCGAGACTCAGC
CCGGCGATAAGCTGTCCGAGGCATTCCGCCAGGCTGCTGAGAACCCCGAA
CAGGAGGTGGATACGTCCGAGTTGACCGATGAGGAGTTCAAGATTCTTCG
TCGTGCCCTTATCCAGATGCGTGATAACCCGATCGATCATTCGAAGCCGT
ACGCTACGCCCTGGCGGCCGCGGGACTTCATGAGCGCCTTTGCCACGATC
CCTCGCTACCTGGAAGTGAACCCTAAGGCTTGTGCGGCCGTCTACCTGCG
CCACCCCGTTGTTCGTCCGGGCTTGTCGGAGGTTCCATCGCCCTTCAACC
TTGCGACTGGAGCGCTGGCATACCACTGGTACCTGAGACGGCGGTAGAAA
GTCCGGCAATCATGGAGCAAATGGAACCTATATAACATGAAGCGGTTCTC
CGTCAAGAACCCCATGTTCCGAACTCATTTCCAGCAAAAATGGGATGCCA
AGTCGATAGCCCGTGGATATCATGGCGAACAAGTCTCCGAGAAGCACTGG
GTGCGCATGTTTTCTCCCCGCATTCGTAGCGTGGTGCCCATGGATCCCGC
CAAACTGGCCAAAGACGATGGTTCTGCCTTGTCTGCCGGCCGTGGTATGG
GTGTTGAGTCGCGTTCTGACACAGCCGCGCATCTTAAACTCTCAAAATAC
GAGAGAGCCGACGCCGACCAACTGGAAAGGCCTTTTCCCTATACACAGGC
GACTTTTGCTCCCCTAGAGCGCCGGCTGGATGTGGCCGTCTTCCGGGCTA
TGTTCGCCAGCAGTACGAGGCAGGCGCGGCAATTTGTCATTCATGGAGCG
GTCACTGTCAATGGAAAGAAGATGAGGAACAGGGCGACCCAGCATCTGAG
CAAGCCGATGAGATACCCCGGTTACCTGCTCAACCCTGGTGATCTTTTCC
AGGTTGAACCCGAGCGTGTCATGTTTGCCACCGGTGCTCCAAAGGACAAG
TACGACCGGCGCGCGGCTCGTGTTGCTGAGAAGGAGGCAGAGAAGGAGGC
GGAGAAAAAGGCCGAGGAAGCCGAGGAAGCCGAGGAAGCCAAGGAAGAGA
GTGAGGCCAAGGAGGAGGATAAGCAAGAGGTCCAGTCCCCCCGCCAGACC
TTGCAGGCTATGCTGTCGCAGGCCAAGAACATCATGGCCGATAGCAAGTC
GGTGCTTCCCGCCAAGCGGAAGCAGGAGCTGCGTGGATTCCAGAAGGCCG
TCCGTCGCGTGCTGTCTCGCTCTGATTCAAACGTCCTCGCCGACAACCTG
GAGGCTCAGTTTTCCGAGCTGACTCTGCTGCTCAAGGCCAAGAAGGCAGA
GAAGACGAAGAAGTCGGGCAACAAGGAAAGACAGGATACCACATCTGCCA
ACTCCGAGAAGTCCGCCGATACCAAGGCTGCTACTGAGGTAGACAGCGAG
ACTCAGCCCGGCGATAAGCTGTCCGAGGCATTCCGCCAGGCTGCTGAGAA
CCCCGAACAGGAGGTGGATACGTCCGAGTTGACCGATGAGGAGTTCAAGA
TTCTTCGTCGTGCCCTTATCCAGATGCGTGATAACCCGATCGATCATTCG
AAGCCGTACGCTACGCCCTGGCGGCCGCGGGACTTCATGAGCGCCTTTGC
CACGATCCCTCGCTACCTGGAAGTGAACCCTAAGGCTTGTGCGGCCGTCT
ACCTGCGCCACCCCGTTGTTCGTCCGGGCTTGTCGGAGGTTCCATCGCCC
TTCAACCTTGCGACTGGAGCGCTGGCATACCACTGGTACCTGAGACGGCG
GTAGAAAGTCCGGCAATCATGGAGCAAATGGAACCTATATAACATGAAGC
GGTTCTCCGTCAAGAACCCCATGTTCCGAACTCATTTCCAGCAAAAATGG
GATGCCAAGTCGATAGCCCGTGGATATCATGGCGAACAAGTCTCCGAGAA
GCACTGGGTGCGCATGTTTTCTCCCCGCATTCGTAGCGTGGTGCCCATGG
ATCCCGCCAAACTGGCCAAAGACGATGGTTCTGCCTTGTCTGCCGGCCGT
GGTATGGGTGTTGAGTCGCGTTCTGACACAGCCGCGCATCTTAAACTCTC
AAAATACGAGAGAGCCGACGCCGACCAACTGGAAAGGCCTTTTCCCTATA
CACAGGCGACTTTTGCTCCCCTAGAGCGCCGGCTGGATGTGGCCGTCTTC
CGGGCTATGTTCGCCAGCAGTACGAGGCAGGCGCGGCAATTTGTCATTCA
TGGAGCGGTCACTGTCAATGGAAAGAAGATGAGGAACAGGGCGACCCAGC
ATCTGAGCAAGCCGATGAGATACCCCGGTTACCTGCTCAACCCTGGTGAT
CTTTTCCAGGTTGAACCCGAGCGTGTCATGTTTGCCACCGGTGCTCCAAA
GGACAAGTACGACCGGCGCGCGGCTCGTGTTGCTGAGAAGGAGGCAGAGA
AGGAGGCGGAGAAAAAGGCCGAGGAAGCCGAGGAAGCCGAGGAAGCCAAG
GAAGAGAGTGAGGCCAAGGAGGAGGATAAGCAAGAGGTCCAGTCCCCCCG
CCAGACCTTGCAGGCTATGCTGTCGCAGGCCAAGAACATCATGGCCGATA
GCAAGTCGGTGCTTCCCGCCAAGCGGAAGCAGGAGCTGCGTGGATTCCAG
AAGGCCGTCCGTCGCGTGCTGTCTCGCTCTGATTCAAACGTCCTCGCCGA
CAACCTGGAGGCTCAGTTTTCCGAGCTGACTCTGCTGCTCAAGGCCAAGA
AGGCAGAGAAGACGAAGAAGTCGGGCAACAAGGAAAGACAGGATACCACA
TCTGCCAACTCCGAGAAGTCCGCCGATACCAAGGCTGCTACTGAGGTAGA
CAGCGAGACTCAGCCCGGCGATAAGCTGTCCGAGGCATTCCGCCAGGCTG
CTGAGAACCCCGAACAGGAGGTGGATACGTCCGAGTTGACCGATGAGGAG
TTCAAGATTCTTCGTCGTGCCCTTATCCAGATGCGTGATAACCCGATCGA
TCATTCGAAGCCGTACGCTACGCCCTGGCGGCCGCGGGACTTCATGAGCG
CCTTTGCCACGATCCCTCGCTACCTGGAAGTGAACCCTAAGGCTTGTGCG
GCCGTCTACCTGCGCCACCCCGTTGTTCGTCCGGGCTTGTCGGAGGTTCC
ATCGCCCTTCAACCTTGCGACTGGAGCGCTGGCATACCACTGGTACCTGA
GACGGCGGTAGAAAGTCCGGCAATCATGGAGCAAATGGAACCTATATAAC
ATGAAGCGGTTCTCCGTCAAGAACCCCATGTTCCGAACTCATTTCCAGCA
AAAATGGGATGCCAAGTCGATAGCCCGTGGATATCATGGCGAACAAGTCT
CCGAGAAGCACTGGGTGCGCATGTTTTCTCCCCGCATTCGTAGCGTGGTG
CCCATGGATCCCGCCAAACTGGCCAAAGACGATGGTTCTGCCTTGTCTGC
CGGCCGTGGTATGGGTGTTGAGTCGCGTTCTGACACAGCCGCGCATCTTA
AACTCTCAAAATACGAGAGAGCCGACGCCGACCAACTGGAAAGGCCTTTT
CCCTATACACAGGCGACTTTTGCTCCCCTAGAGCGCCGGCTGGATGTGGC
CGTCTTCCGGGCTATGTTCGCCAGCAGTACGAGGCAGGCGCGGCAATTTG
TCATTCATGGAGCGGTCACTGTCAATGGAAAGAAGATGAGGAACAGGGCG
ACCCAGCATCTGAGCAAGCCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0019843 | rRNA binding |
| GO:0003723 | RNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| Note | BUSCO:EOG092651FJ |
| DBxref | InterPro:IPR018079 |
| DBxref | InterPro:IPR036986 |
| DBxref | InterPro:IPR002942 |
| DBxref | PFAM:PF01479 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:2228024..2229589 - |
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