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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2228024..2229589- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_004978-T1 ID=KYF_004978-T1|Name=KYF_004978-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1566bp|location=Sequence derived from alignment at ch4:2228024..2229589- (Aspergillus niger KYF3) ATGAGGAACAGGGCGACCCAGCATCTGAGCAAGCCGGTAAGGACATTTCT
TTCTTTTTTCTTGCTCTGTCTCCTTGCTCATCTCGCCGCAATTGCTAATT
CTGGTATGCTTTGCTTAGAAAGTCCGGCAATCATGGAGCAAATGGAACCT
ATATAACATGAAGCGGTTCTCCGTCAAGAACCCCATGTTCCGAACTCATT
TCCAGCAAAAATGGGATGCCAAGTCGATAGCCCGTGGATATCATGGCGAA
CAAGTCTCCGAGAAGCACTGGGTGCGCATGTTTTCTCCCCGCATTCGTAG
CGTGGTGCCCATGGATCCCGCCAAACTGGCCAAAGACGATGGTTCTGCCT
TGTCTGCCGGCCGTGGTATGGGTGTTGAGTCGCGTTCTGACACAGCCGCG
CATCTTAAACTCTCAAAATACGAGAGAGCCGACGCCGACCAACTGGAAAG
GCCTTTTCCCTATACACAGGCGACTTTTGCTCCCCTAGAGCGCCGGCTGG
ATGTGGCCGTCTTCCGGGCTATGTTCGCCAGCAGTACGAGGCAGGCGCGG
CAATTTGTCATTCATGGAGCGGTCACTGTCAATGGAAAGAAGGTGAGTGT
GCCTGGGACGCTGCATGGTCCTTTTCATTTAAGCGCTGCCATCGAAAGCT
GATCGGTTACGTTTGACAGATGAGATACCCCGGTTACCTGCTCAACCCTG
GTGATCTTTTCCAGGTTGAACCCGAGCGTGTCATGTTTGCCACCGGTGCT
CCAAAGGACAAGTACGACCGGCGCGCGGCTCGTGTTGCTGAGAAGGAGGC
AGAGAAGGAGGCGGAGAAAAAGGCCGAGGAAGCCGAGGAAGCCGAGGAAG
CCAAGGAAGAGAGTGAGGCCAAGGAGGAGGATAAGCAAGAGGTCCAGTCC
CCCCGCCAGACCTTGCAGGCTATGCTGTCGCAGGCCAAGAACATCATGGC
CGATAGCAAGTCGGTGCTTCCCGCCAAGCGGAAGCAGGAGCTGCGTGGAT
TCCAGAAGGCCGTCCGTCGCGTGCTGTCTCGCTCTGATTCAAACGTCCTC
GCCGACAACCTGGAGGCTCAGTTTTCCGAGCTGACTCTGCTGCTCAAGGC
CAAGAAGGCAGAGAAGACGAAGAAGTCGGGCAACAAGGAAAGACAGGATA
CCACATCTGCCAACTCCGAGAAGTCCGCCGATACCAAGGCTGCTACTGAG
GTAGACAGCGAGACTCAGCCCGGCGATAAGCTGTCCGAGGCATTCCGCCA
GGCTGCTGAGAACCCCGAACAGGAGGTGGATACGTCCGAGTTGACCGATG
AGGAGTTCAAGATTCTTCGTCGTGCCCTTATCCAGATGCGTGATAACCCG
ATCGATCATTCGAAGCCGTACGCTACGCCCTGGCGGCCGCGGGACTTCAT
GAGCGCCTTTGCCACGATCCCTCGCTACCTGGAAGTGAACCCTAAGGCTT
GTGCGGCCGTCTACCTGCGCCACCCCGTTGTTCGTCCGGGCTTGTCGGAG
GTTCCATCGCCCTTCAACCTTGCGACTGGAGCGCTGGCATACCACTGGTA
CCTGAGACGGCGGTAG back to topCoding sequence (CDS) from alignment at ch4:2228024..2229589- >KYF_004978-T1 ID=KYF_004978-T1|Name=KYF_004978-T1|organism=Aspergillus niger KYF3|type=CDS|length=4221bp|location=Sequence derived from alignment at ch4:2228024..2229589- (Aspergillus niger KYF3) ATGAGATACCCCGGTTACCTGCTCAACCCTGGTGATCTTTTCCAGGTTGA ACCCGAGCGTGTCATGTTTGCCACCGGTGCTCCAAAGGACAAGTACGACC GGCGCGCGGCTCGTGTTGCTGAGAAGGAGGCAGAGAAGGAGGCGGAGAAA AAGGCCGAGGAAGCCGAGGAAGCCGAGGAAGCCAAGGAAGAGAGTGAGGC CAAGGAGGAGGATAAGCAAGAGGTCCAGTCCCCCCGCCAGACCTTGCAGG CTATGCTGTCGCAGGCCAAGAACATCATGGCCGATAGCAAGTCGGTGCTT CCCGCCAAGCGGAAGCAGGAGCTGCGTGGATTCCAGAAGGCCGTCCGTCG CGTGCTGTCTCGCTCTGATTCAAACGTCCTCGCCGACAACCTGGAGGCTC AGTTTTCCGAGCTGACTCTGCTGCTCAAGGCCAAGAAGGCAGAGAAGACG AAGAAGTCGGGCAACAAGGAAAGACAGGATACCACATCTGCCAACTCCGA GAAGTCCGCCGATACCAAGGCTGCTACTGAGGTAGACAGCGAGACTCAGC CCGGCGATAAGCTGTCCGAGGCATTCCGCCAGGCTGCTGAGAACCCCGAA CAGGAGGTGGATACGTCCGAGTTGACCGATGAGGAGTTCAAGATTCTTCG TCGTGCCCTTATCCAGATGCGTGATAACCCGATCGATCATTCGAAGCCGT ACGCTACGCCCTGGCGGCCGCGGGACTTCATGAGCGCCTTTGCCACGATC CCTCGCTACCTGGAAGTGAACCCTAAGGCTTGTGCGGCCGTCTACCTGCG CCACCCCGTTGTTCGTCCGGGCTTGTCGGAGGTTCCATCGCCCTTCAACC TTGCGACTGGAGCGCTGGCATACCACTGGTACCTGAGACGGCGGTAGAAA GTCCGGCAATCATGGAGCAAATGGAACCTATATAACATGAAGCGGTTCTC CGTCAAGAACCCCATGTTCCGAACTCATTTCCAGCAAAAATGGGATGCCA AGTCGATAGCCCGTGGATATCATGGCGAACAAGTCTCCGAGAAGCACTGG GTGCGCATGTTTTCTCCCCGCATTCGTAGCGTGGTGCCCATGGATCCCGC CAAACTGGCCAAAGACGATGGTTCTGCCTTGTCTGCCGGCCGTGGTATGG GTGTTGAGTCGCGTTCTGACACAGCCGCGCATCTTAAACTCTCAAAATAC GAGAGAGCCGACGCCGACCAACTGGAAAGGCCTTTTCCCTATACACAGGC GACTTTTGCTCCCCTAGAGCGCCGGCTGGATGTGGCCGTCTTCCGGGCTA TGTTCGCCAGCAGTACGAGGCAGGCGCGGCAATTTGTCATTCATGGAGCG GTCACTGTCAATGGAAAGAAGATGAGGAACAGGGCGACCCAGCATCTGAG CAAGCCGATGAGATACCCCGGTTACCTGCTCAACCCTGGTGATCTTTTCC AGGTTGAACCCGAGCGTGTCATGTTTGCCACCGGTGCTCCAAAGGACAAG TACGACCGGCGCGCGGCTCGTGTTGCTGAGAAGGAGGCAGAGAAGGAGGC GGAGAAAAAGGCCGAGGAAGCCGAGGAAGCCGAGGAAGCCAAGGAAGAGA GTGAGGCCAAGGAGGAGGATAAGCAAGAGGTCCAGTCCCCCCGCCAGACC TTGCAGGCTATGCTGTCGCAGGCCAAGAACATCATGGCCGATAGCAAGTC GGTGCTTCCCGCCAAGCGGAAGCAGGAGCTGCGTGGATTCCAGAAGGCCG TCCGTCGCGTGCTGTCTCGCTCTGATTCAAACGTCCTCGCCGACAACCTG GAGGCTCAGTTTTCCGAGCTGACTCTGCTGCTCAAGGCCAAGAAGGCAGA GAAGACGAAGAAGTCGGGCAACAAGGAAAGACAGGATACCACATCTGCCA ACTCCGAGAAGTCCGCCGATACCAAGGCTGCTACTGAGGTAGACAGCGAG ACTCAGCCCGGCGATAAGCTGTCCGAGGCATTCCGCCAGGCTGCTGAGAA CCCCGAACAGGAGGTGGATACGTCCGAGTTGACCGATGAGGAGTTCAAGA TTCTTCGTCGTGCCCTTATCCAGATGCGTGATAACCCGATCGATCATTCG AAGCCGTACGCTACGCCCTGGCGGCCGCGGGACTTCATGAGCGCCTTTGC CACGATCCCTCGCTACCTGGAAGTGAACCCTAAGGCTTGTGCGGCCGTCT ACCTGCGCCACCCCGTTGTTCGTCCGGGCTTGTCGGAGGTTCCATCGCCC TTCAACCTTGCGACTGGAGCGCTGGCATACCACTGGTACCTGAGACGGCG GTAGAAAGTCCGGCAATCATGGAGCAAATGGAACCTATATAACATGAAGC GGTTCTCCGTCAAGAACCCCATGTTCCGAACTCATTTCCAGCAAAAATGG GATGCCAAGTCGATAGCCCGTGGATATCATGGCGAACAAGTCTCCGAGAA GCACTGGGTGCGCATGTTTTCTCCCCGCATTCGTAGCGTGGTGCCCATGG ATCCCGCCAAACTGGCCAAAGACGATGGTTCTGCCTTGTCTGCCGGCCGT GGTATGGGTGTTGAGTCGCGTTCTGACACAGCCGCGCATCTTAAACTCTC AAAATACGAGAGAGCCGACGCCGACCAACTGGAAAGGCCTTTTCCCTATA CACAGGCGACTTTTGCTCCCCTAGAGCGCCGGCTGGATGTGGCCGTCTTC CGGGCTATGTTCGCCAGCAGTACGAGGCAGGCGCGGCAATTTGTCATTCA TGGAGCGGTCACTGTCAATGGAAAGAAGATGAGGAACAGGGCGACCCAGC ATCTGAGCAAGCCGATGAGATACCCCGGTTACCTGCTCAACCCTGGTGAT CTTTTCCAGGTTGAACCCGAGCGTGTCATGTTTGCCACCGGTGCTCCAAA GGACAAGTACGACCGGCGCGCGGCTCGTGTTGCTGAGAAGGAGGCAGAGA AGGAGGCGGAGAAAAAGGCCGAGGAAGCCGAGGAAGCCGAGGAAGCCAAG GAAGAGAGTGAGGCCAAGGAGGAGGATAAGCAAGAGGTCCAGTCCCCCCG CCAGACCTTGCAGGCTATGCTGTCGCAGGCCAAGAACATCATGGCCGATA GCAAGTCGGTGCTTCCCGCCAAGCGGAAGCAGGAGCTGCGTGGATTCCAG AAGGCCGTCCGTCGCGTGCTGTCTCGCTCTGATTCAAACGTCCTCGCCGA CAACCTGGAGGCTCAGTTTTCCGAGCTGACTCTGCTGCTCAAGGCCAAGA AGGCAGAGAAGACGAAGAAGTCGGGCAACAAGGAAAGACAGGATACCACA TCTGCCAACTCCGAGAAGTCCGCCGATACCAAGGCTGCTACTGAGGTAGA CAGCGAGACTCAGCCCGGCGATAAGCTGTCCGAGGCATTCCGCCAGGCTG CTGAGAACCCCGAACAGGAGGTGGATACGTCCGAGTTGACCGATGAGGAG TTCAAGATTCTTCGTCGTGCCCTTATCCAGATGCGTGATAACCCGATCGA TCATTCGAAGCCGTACGCTACGCCCTGGCGGCCGCGGGACTTCATGAGCG CCTTTGCCACGATCCCTCGCTACCTGGAAGTGAACCCTAAGGCTTGTGCG GCCGTCTACCTGCGCCACCCCGTTGTTCGTCCGGGCTTGTCGGAGGTTCC ATCGCCCTTCAACCTTGCGACTGGAGCGCTGGCATACCACTGGTACCTGA GACGGCGGTAGAAAGTCCGGCAATCATGGAGCAAATGGAACCTATATAAC ATGAAGCGGTTCTCCGTCAAGAACCCCATGTTCCGAACTCATTTCCAGCA AAAATGGGATGCCAAGTCGATAGCCCGTGGATATCATGGCGAACAAGTCT CCGAGAAGCACTGGGTGCGCATGTTTTCTCCCCGCATTCGTAGCGTGGTG CCCATGGATCCCGCCAAACTGGCCAAAGACGATGGTTCTGCCTTGTCTGC CGGCCGTGGTATGGGTGTTGAGTCGCGTTCTGACACAGCCGCGCATCTTA AACTCTCAAAATACGAGAGAGCCGACGCCGACCAACTGGAAAGGCCTTTT CCCTATACACAGGCGACTTTTGCTCCCCTAGAGCGCCGGCTGGATGTGGC CGTCTTCCGGGCTATGTTCGCCAGCAGTACGAGGCAGGCGCGGCAATTTG TCATTCATGGAGCGGTCACTGTCAATGGAAAGAAGATGAGGAACAGGGCG ACCCAGCATCTGAGCAAGCCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
Term | Definition |
GO:0019843 | rRNA binding |
GO:0003723 | RNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
Property Name | Value |
Note | EggNog:ENOG41 |
Note | BUSCO:EOG092651FJ |
DBxref | InterPro:IPR018079 |
DBxref | InterPro:IPR036986 |
DBxref | InterPro:IPR002942 |
DBxref | PFAM:PF01479 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch4 | supercontig | ch4:2228024..2229589 - |
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