|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2268250..2270169+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_004992-T1 ID=KYF_004992-T1|Name=KYF_004992-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1920bp|location=Sequence derived from alignment at ch4:2268250..2270169+ (Aspergillus niger KYF3) ATGAGATCCACGACCAGTCGCAAGGGACAGACGTCCATCACTCATCTGAT
GAACTTCTCCCTTCCCCCTCGTCCTCAGTACCATCCTCCACCCCGTAATA
CTCGCCGCTATACGTCCTGGGGTCCAGGTTCCGGCTACCATGCCATGGAC
AAATCCCGCTACGTTCATGCCAACTATCGCTTTATTGTGACGCCAAATCG
CAACTACCATGCACAAGCGGCCAATGCTGATGTCCATCTTGACTGGGATT
CAGTGATGCAGGTCTTGGTATCAGAGCAGACACAGTCAGCTAGCTGCCCC
ATCTGTTTGTCCACACCGGTAGCGCCACGCATGGCTCGTTGTGGTCATAT
ATTCTGCCTTCCTTGTTTGATTCGCTACATGCATTCGACTGACGAGGAAA
AACCGGTTCCTGAGAAGAAGCCACGATGGAAAAAGTGCCCCATCTGTTGG
GACTCTGTGTACATTTCGGAAACTCGGCCTGTGCGATGGTTTCGTGGCCA
AGAAGGGGACCTCCCATTCGAGGGGGGTGATGTCGTGCTAAGGCTAGTGA
AAAGAGAGCCCGGAAGCACGTTAGCACTCCCACGGGATGGAGCTGAGGGA
ATAGCACCAGATGAGGATGTTCCGTGGTATCATGCTGCAGAAGTGGCTGA
TTACGCGCGCATAATGAAAGGAGGTGAAGATTATATGAAAGAACAATACG
ACATTGAGATTGATGAGCTCCGCAGGCAGGAGCTTGAGGATGAGCTTTTA
TTTGGAGATGATACTACTTGGACACGGAAGGCGGTTGCAGCAATTGCAGA
TGCCAAATCCAAGGTAGAGGGTATAGGGAACCCACCCGAGATTGTGCGAC
TGCCCGTCCCAAGCCAAGAGCCAAAGGAACCTGTCGCCGCACACTCACCA
CCAGAGGAAATTGCTGCCATGTATGCATCGCAGCATGCAATCAAGTCAGG
CCAAAGTTCGTCTGCGGAGTCTATCCCCGCGTCAGATACTGGGCCTGGTT
CGGCCTCCACTCCGGAGACGTCCAATGATGTGGATCGTACAGCCGAAGCT
TTGGGCCAGGTTGACCTGAATACAACCTCTGCCCCGAAAAAGAAAAAGAG
AGATCCTGGACACGGCCGAAATAATATGCCCTCAAAGCGAGGTCCTACTA
CATCTGACCATGCGTTCTTCTTCTACCAAGCTCTACCCCAATTCTACCTT
TCGCCCTTGGACATCCGCATCTTGAAAGCTGCATTTGGCGATTACTCTTC
ATTCCCGGCCACCATTCTCCCTAGGGTTGAGCGTATTTCGAGCGGTCATA
TTGTGGACGACGAGCTACGCAAACGAGTCAAGTATCTCAGCCACCTGCCG
CAAGGTTGTGAGGTGAACTTTCTCGAGTGTGACTGGAGAGACGTAGTTGT
GCCGGAGGTGCTAGAAAATTTCAAGTCGGAAACTGAAAAGAGACGGAAGC
GCAATAAGGAGAAAGAGGTGCGAGAAGAGAAGGATCGCATCCGAGCGGAG
AAAGAAGAGGATGAAAAGCGCTGGGCAGCGGCGCGCCGGAAGAGGCCTAG
CATTGGCCCCGTCGATGAACCTCCCTTCTCCGACCGCGATTTTCAGCCGT
TATCGGGCTCTGCTGGCGAGCCTTCTGGCTTCGATATAGGCTCTTCCTCT
GCATCCCCTCCGCCCTCCTCGAGTCCCCCCGGATCTCGTACGGTGTGGGG
AACAGTTGCCGCTCCGACACTTTCGGCTCCGTCGAGCTCACAAGCCCCTG
CCGATGGTTGGCTGCAGGGCTGGGAGGAGGAGCTGTGGGCCCAGCAAGAA
AGGGAGCTCTTGGCTCAATCTGCTGCTGAGGCGAACACTCCAGCTTCTTC
CTCTGGCGGGAAAAAGAAGAAGAATAAGAAAATTACACTCATGTCGACCA
ATATCCAAAGAGGGGCATAG back to topCoding sequence (CDS) from alignment at ch4:2268250..2270169+ >KYF_004992-T1 ID=KYF_004992-T1|Name=KYF_004992-T1|organism=Aspergillus niger KYF3|type=CDS|length=1920bp|location=Sequence derived from alignment at ch4:2268250..2270169+ (Aspergillus niger KYF3) ATGAGATCCACGACCAGTCGCAAGGGACAGACGTCCATCACTCATCTGAT GAACTTCTCCCTTCCCCCTCGTCCTCAGTACCATCCTCCACCCCGTAATA CTCGCCGCTATACGTCCTGGGGTCCAGGTTCCGGCTACCATGCCATGGAC AAATCCCGCTACGTTCATGCCAACTATCGCTTTATTGTGACGCCAAATCG CAACTACCATGCACAAGCGGCCAATGCTGATGTCCATCTTGACTGGGATT CAGTGATGCAGGTCTTGGTATCAGAGCAGACACAGTCAGCTAGCTGCCCC ATCTGTTTGTCCACACCGGTAGCGCCACGCATGGCTCGTTGTGGTCATAT ATTCTGCCTTCCTTGTTTGATTCGCTACATGCATTCGACTGACGAGGAAA AACCGGTTCCTGAGAAGAAGCCACGATGGAAAAAGTGCCCCATCTGTTGG GACTCTGTGTACATTTCGGAAACTCGGCCTGTGCGATGGTTTCGTGGCCA AGAAGGGGACCTCCCATTCGAGGGGGGTGATGTCGTGCTAAGGCTAGTGA AAAGAGAGCCCGGAAGCACGTTAGCACTCCCACGGGATGGAGCTGAGGGA ATAGCACCAGATGAGGATGTTCCGTGGTATCATGCTGCAGAAGTGGCTGA TTACGCGCGCATAATGAAAGGAGGTGAAGATTATATGAAAGAACAATACG ACATTGAGATTGATGAGCTCCGCAGGCAGGAGCTTGAGGATGAGCTTTTA TTTGGAGATGATACTACTTGGACACGGAAGGCGGTTGCAGCAATTGCAGA TGCCAAATCCAAGGTAGAGGGTATAGGGAACCCACCCGAGATTGTGCGAC TGCCCGTCCCAAGCCAAGAGCCAAAGGAACCTGTCGCCGCACACTCACCA CCAGAGGAAATTGCTGCCATGTATGCATCGCAGCATGCAATCAAGTCAGG CCAAAGTTCGTCTGCGGAGTCTATCCCCGCGTCAGATACTGGGCCTGGTT CGGCCTCCACTCCGGAGACGTCCAATGATGTGGATCGTACAGCCGAAGCT TTGGGCCAGGTTGACCTGAATACAACCTCTGCCCCGAAAAAGAAAAAGAG AGATCCTGGACACGGCCGAAATAATATGCCCTCAAAGCGAGGTCCTACTA CATCTGACCATGCGTTCTTCTTCTACCAAGCTCTACCCCAATTCTACCTT TCGCCCTTGGACATCCGCATCTTGAAAGCTGCATTTGGCGATTACTCTTC ATTCCCGGCCACCATTCTCCCTAGGGTTGAGCGTATTTCGAGCGGTCATA TTGTGGACGACGAGCTACGCAAACGAGTCAAGTATCTCAGCCACCTGCCG CAAGGTTGTGAGGTGAACTTTCTCGAGTGTGACTGGAGAGACGTAGTTGT GCCGGAGGTGCTAGAAAATTTCAAGTCGGAAACTGAAAAGAGACGGAAGC GCAATAAGGAGAAAGAGGTGCGAGAAGAGAAGGATCGCATCCGAGCGGAG AAAGAAGAGGATGAAAAGCGCTGGGCAGCGGCGCGCCGGAAGAGGCCTAG CATTGGCCCCGTCGATGAACCTCCCTTCTCCGACCGCGATTTTCAGCCGT TATCGGGCTCTGCTGGCGAGCCTTCTGGCTTCGATATAGGCTCTTCCTCT GCATCCCCTCCGCCCTCCTCGAGTCCCCCCGGATCTCGTACGGTGTGGGG AACAGTTGCCGCTCCGACACTTTCGGCTCCGTCGAGCTCACAAGCCCCTG CCGATGGTTGGCTGCAGGGCTGGGAGGAGGAGCTGTGGGCCCAGCAAGAA AGGGAGCTCTTGGCTCAATCTGCTGCTGAGGCGAACACTCCAGCTTCTTC CTCTGGCGGGAAAAAGAAGAAGAATAAGAAAATTACACTCATGTCGACCA ATATCCAAAGAGGGGCATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
Term | Definition |
GO:0046872 | metal ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
Property Name | Value |
DBxref | InterPro:IPR017907 |
DBxref | InterPro:IPR013083 |
DBxref | InterPro:IPR018957 |
DBxref | InterPro:IPR001841 |
DBxref | PFAM:PF13445 |
DBxref | PFAM:PF00097 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch4 | supercontig | ch4:2268250..2270169 + |
|