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KYF_005072-T1, KYF_005072-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_005072-T1
Unique NameKYF_005072-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:2579439..2580694-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_005072-T1 ID=KYF_005072-T1|Name=KYF_005072-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1256bp|location=Sequence derived from alignment at ch4:2579439..2580694- (Aspergillus niger KYF3)
ATGGCCGGTAGAGCAGGCATGAAACGTGATGCTAATCATTTGACGACACC
AGAGGCCGATTCAAAGAAACCCAAGGCCAATGGAAGCATCACTTCATTCT
TTGGTGCCCCCAAGAACAAGTCCAGCGACTCAAAGGCCACTTCGTCTTCA
TCGGCCTTTAATAAGCAGAAATGGGTCGACTCATTGACTTCAGAACAAAA
GGAGCTCCTTCAACTTGAGATTGACACTCTTGATGAGAGCTGGCTGGCAC
AGCTCAAGGAGGAAGTCGTCAAGCCTGAGTTCCTGGCCCTGAAGCGCTTC
CTCCAGAAGGAAAAGCAATCGGGAGCTAAAATCTTTCCTCCCGAAGAAGA
TATCTACTCATGGTAAATCCCCATTGTCTCCCATTTTGGCTCTACAATTA
TTATAGCAATTGGGGCAGCTAATCTTGAATACTAGGTCCCGTCATACACC
TCTCCACAAGGTGAAGGTGGTCATCGTCGGCCAAGATCCTTATCATAATT
ATAACCAGGCCCATGGCCTTGCATTCTCCGTCCGCCCTCCAACTCCTGCC
CCGCCTTCCCTCGTCAACATCTTTAACGAAATTCATAATGACTATCCTTC
TTTCCAAAGACCCGCAAACAAGGGTGGCCTTCTCATACCCTGGGCTGAGC
GTGGTGTACTGATGCTCAACACTTGCTTGACCGTACGCGCGCATCAAGCC
GCTAGCCATTCAAACAAGGGCTGGGAACTGTTCACGCAGAAAGCCATAGA
CTTAGTGGCCCGAGTACGGACGCGCGGTGTTGTTTTCCTTGCATGGGGAA
CACCCGCAGGGAAGCGCGTGACAGGCATCAATAGAGCAAAGCATTATGTT
CTGCAATCGGTCCACCCAAGCCCGCTAAGTGCGTCAAGAGGATTCGTAAG
TAGACCCTTGTTATCATCATTCATTGGCCATCTAATTTTGACGTTTGGTT
GTTTTGTAGTTCGGAAACCAGCATTTCAAAAAATGTAATGAGTGGCTTGC
TGAACGTTATGGTGCCGACGAAGTCATTGACTGGTCATTGACTTCGAAGA
GCAAAACCAGCTCTCCTTTTGCCACCATTCAAAGCCCCGCTCTCACTGGT
GCCCCGAATAAGCCTATCGCTAAAGGGTCAGATGCTAGTTTGGAGGAAGA
GGTCTCCAGGACAACAGAGCCTGCCAAGTCCACCGAGGCCGTTGACGAGT
TTGAAGACGATCTCGATGCGCTGGAAGCCCTAGCAGCAGCAGAAGCGACC
AGATAG
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Coding sequence (CDS) from alignment at ch4:2579439..2580694-

>KYF_005072-T1 ID=KYF_005072-T1|Name=KYF_005072-T1|organism=Aspergillus niger KYF3|type=CDS|length=3357bp|location=Sequence derived from alignment at ch4:2579439..2580694- (Aspergillus niger KYF3)
TTCGGAAACCAGCATTTCAAAAAATGTAATGAGTGGCTTGCTGAACGTTA
TGGTGCCGACGAAGTCATTGACTGGTCATTGACTTCGAAGAGCAAAACCA
GCTCTCCTTTTGCCACCATTCAAAGCCCCGCTCTCACTGGTGCCCCGAAT
AAGCCTATCGCTAAAGGGTCAGATGCTAGTTTGGAGGAAGAGGTCTCCAG
GACAACAGAGCCTGCCAAGTCCACCGAGGCCGTTGACGAGTTTGAAGACG
ATCTCGATGCGCTGGAAGCCCTAGCAGCAGCAGAAGCGACCAGATAGGTC
CCGTCATACACCTCTCCACAAGGTGAAGGTGGTCATCGTCGGCCAAGATC
CTTATCATAATTATAACCAGGCCCATGGCCTTGCATTCTCCGTCCGCCCT
CCAACTCCTGCCCCGCCTTCCCTCGTCAACATCTTTAACGAAATTCATAA
TGACTATCCTTCTTTCCAAAGACCCGCAAACAAGGGTGGCCTTCTCATAC
CCTGGGCTGAGCGTGGTGTACTGATGCTCAACACTTGCTTGACCGTACGC
GCGCATCAAGCCGCTAGCCATTCAAACAAGGGCTGGGAACTGTTCACGCA
GAAAGCCATAGACTTAGTGGCCCGAGTACGGACGCGCGGTGTTGTTTTCC
TTGCATGGGGAACACCCGCAGGGAAGCGCGTGACAGGCATCAATAGAGCA
AAGCATTATGTTCTGCAATCGGTCCACCCAAGCCCGCTAAGTGCGTCAAG
AGGATTCATGGCCGGTAGAGCAGGCATGAAACGTGATGCTAATCATTTGA
CGACACCAGAGGCCGATTCAAAGAAACCCAAGGCCAATGGAAGCATCACT
TCATTCTTTGGTGCCCCCAAGAACAAGTCCAGCGACTCAAAGGCCACTTC
GTCTTCATCGGCCTTTAATAAGCAGAAATGGGTCGACTCATTGACTTCAG
AACAAAAGGAGCTCCTTCAACTTGAGATTGACACTCTTGATGAGAGCTGG
CTGGCACAGCTCAAGGAGGAAGTCGTCAAGCCTGAGTTCCTGGCCCTGAA
GCGCTTCCTCCAGAAGGAAAAGCAATCGGGAGCTAAAATCTTTCCTCCCG
AAGAAGATATCTACTCATGTTCGGAAACCAGCATTTCAAAAAATGTAATG
AGTGGCTTGCTGAACGTTATGGTGCCGACGAAGTCATTGACTGGTCATTG
ACTTCGAAGAGCAAAACCAGCTCTCCTTTTGCCACCATTCAAAGCCCCGC
TCTCACTGGTGCCCCGAATAAGCCTATCGCTAAAGGGTCAGATGCTAGTT
TGGAGGAAGAGGTCTCCAGGACAACAGAGCCTGCCAAGTCCACCGAGGCC
GTTGACGAGTTTGAAGACGATCTCGATGCGCTGGAAGCCCTAGCAGCAGC
AGAAGCGACCAGATAGGTCCCGTCATACACCTCTCCACAAGGTGAAGGTG
GTCATCGTCGGCCAAGATCCTTATCATAATTATAACCAGGCCCATGGCCT
TGCATTCTCCGTCCGCCCTCCAACTCCTGCCCCGCCTTCCCTCGTCAACA
TCTTTAACGAAATTCATAATGACTATCCTTCTTTCCAAAGACCCGCAAAC
AAGGGTGGCCTTCTCATACCCTGGGCTGAGCGTGGTGTACTGATGCTCAA
CACTTGCTTGACCGTACGCGCGCATCAAGCCGCTAGCCATTCAAACAAGG
GCTGGGAACTGTTCACGCAGAAAGCCATAGACTTAGTGGCCCGAGTACGG
ACGCGCGGTGTTGTTTTCCTTGCATGGGGAACACCCGCAGGGAAGCGCGT
GACAGGCATCAATAGAGCAAAGCATTATGTTCTGCAATCGGTCCACCCAA
GCCCGCTAAGTGCGTCAAGAGGATTCATGGCCGGTAGAGCAGGCATGAAA
CGTGATGCTAATCATTTGACGACACCAGAGGCCGATTCAAAGAAACCCAA
GGCCAATGGAAGCATCACTTCATTCTTTGGTGCCCCCAAGAACAAGTCCA
GCGACTCAAAGGCCACTTCGTCTTCATCGGCCTTTAATAAGCAGAAATGG
GTCGACTCATTGACTTCAGAACAAAAGGAGCTCCTTCAACTTGAGATTGA
CACTCTTGATGAGAGCTGGCTGGCACAGCTCAAGGAGGAAGTCGTCAAGC
CTGAGTTCCTGGCCCTGAAGCGCTTCCTCCAGAAGGAAAAGCAATCGGGA
GCTAAAATCTTTCCTCCCGAAGAAGATATCTACTCATGTTCGGAAACCAG
CATTTCAAAAAATGTAATGAGTGGCTTGCTGAACGTTATGGTGCCGACGA
AGTCATTGACTGGTCATTGACTTCGAAGAGCAAAACCAGCTCTCCTTTTG
CCACCATTCAAAGCCCCGCTCTCACTGGTGCCCCGAATAAGCCTATCGCT
AAAGGGTCAGATGCTAGTTTGGAGGAAGAGGTCTCCAGGACAACAGAGCC
TGCCAAGTCCACCGAGGCCGTTGACGAGTTTGAAGACGATCTCGATGCGC
TGGAAGCCCTAGCAGCAGCAGAAGCGACCAGATAGGTCCCGTCATACACC
TCTCCACAAGGTGAAGGTGGTCATCGTCGGCCAAGATCCTTATCATAATT
ATAACCAGGCCCATGGCCTTGCATTCTCCGTCCGCCCTCCAACTCCTGCC
CCGCCTTCCCTCGTCAACATCTTTAACGAAATTCATAATGACTATCCTTC
TTTCCAAAGACCCGCAAACAAGGGTGGCCTTCTCATACCCTGGGCTGAGC
GTGGTGTACTGATGCTCAACACTTGCTTGACCGTACGCGCGCATCAAGCC
GCTAGCCATTCAAACAAGGGCTGGGAACTGTTCACGCAGAAAGCCATAGA
CTTAGTGGCCCGAGTACGGACGCGCGGTGTTGTTTTCCTTGCATGGGGAA
CACCCGCAGGGAAGCGCGTGACAGGCATCAATAGAGCAAAGCATTATGTT
CTGCAATCGGTCCACCCAAGCCCGCTAAGTGCGTCAAGAGGATTCATGGC
CGGTAGAGCAGGCATGAAACGTGATGCTAATCATTTGACGACACCAGAGG
CCGATTCAAAGAAACCCAAGGCCAATGGAAGCATCACTTCATTCTTTGGT
GCCCCCAAGAACAAGTCCAGCGACTCAAAGGCCACTTCGTCTTCATCGGC
CTTTAATAAGCAGAAATGGGTCGACTCATTGACTTCAGAACAAAAGGAGC
TCCTTCAACTTGAGATTGACACTCTTGATGAGAGCTGGCTGGCACAGCTC
AAGGAGGAAGTCGTCAAGCCTGAGTTCCTGGCCCTGAAGCGCTTCCTCCA
GAAGGAAAAGCAATCGGGAGCTAAAATCTTTCCTCCCGAAGAAGATATCT
ACTCATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO:0006284base-excision repair
Vocabulary: Molecular Function
TermDefinition
GO:0016799hydrolase activity, hydrolyzing N-glycosyl compounds
GO:0004844uracil DNA N-glycosylase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_005072KYF_005072Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_005072-T1KYF_005072-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_005072-T1.cdsKYF_005072-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_005072-T1.exon3KYF_005072-T1.exon3Aspergillus niger KYF3exon
KYF_005072-T1.exon2KYF_005072-T1.exon2Aspergillus niger KYF3exon
KYF_005072-T1.exon1KYF_005072-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
NoteBUSCO:EOG09264GMT
DBxrefInterPro:IPR018085
DBxrefInterPro:IPR002043
DBxrefInterPro:IPR036895
DBxrefInterPro:IPR005122
DBxrefPFAM:PF03167
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:2579439..2580694 -
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