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KYF_005107-T1, KYF_005107-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_005107-T1
Unique NameKYF_005107-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:2683902..2684391-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_005107-T1 ID=KYF_005107-T1|Name=KYF_005107-T1|organism=Aspergillus niger KYF3|type=mRNA|length=490bp|location=Sequence derived from alignment at ch4:2683902..2684391- (Aspergillus niger KYF3)
ATGTCTGAGACTTCTGCCGGTATGCACATCCCAGGTCTCGTTTTTCTCAT
GGCCATATACTGACAATTTCTATAGCCTGGCCCCTCGCCGATGAGGCCCT
CACCCAGAACCTCCTGGACCTTGTCCAGCAGGCCGGTCACTACCGCCAGC
TGAAGAAGGGTGCTAACGAGGGTATGTGCTTCCTCAAGAACACTCATTGT
CTGTCTGTCTGCTAACTGTCTTTGCAGCCACCAAGACTCTTAACCGTGGT
ACCTCCGAGCTCGTTATCCTCGCTGCCGACACCTCTCCCCTCGCTATCCT
CCTCCACATCCCCCTCCTTGCTGAGGACAAGAACACCCCTTATGTCTTCG
TGCCCAGCAAGCTTGCTCTCGGCCGTGCTACCGGTGTTTCCCGCCCCGTG
ATTGCGGCCAGTATCACCACCAACGAGGCCAGTGACCTCCAGGGCCAGAT
CAAGACCATCAAGGACAAGGTCGAGAGACTGATGATCTAA
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Coding sequence (CDS) from alignment at ch4:2683902..2684391-

>KYF_005107-T1 ID=KYF_005107-T1|Name=KYF_005107-T1|organism=Aspergillus niger KYF3|type=CDS|length=1134bp|location=Sequence derived from alignment at ch4:2683902..2684391- (Aspergillus niger KYF3)
CCACCAAGACTCTTAACCGTGGTACCTCCGAGCTCGTTATCCTCGCTGCC
GACACCTCTCCCCTCGCTATCCTCCTCCACATCCCCCTCCTTGCTGAGGA
CAAGAACACCCCTTATGTCTTCGTGCCCAGCAAGCTTGCTCTCGGCCGTG
CTACCGGTGTTTCCCGCCCCGTGATTGCGGCCAGTATCACCACCAACGAG
GCCAGTGACCTCCAGGGCCAGATCAAGACCATCAAGGACAAGGTCGAGAG
ACTGATGATCTAACCTGGCCCCTCGCCGATGAGGCCCTCACCCAGAACCT
CCTGGACCTTGTCCAGCAGGCCGGTCACTACCGCCAGCTGAAGAAGGGTG
CTAACGAGGATGTCTGAGACTTCTGCCGCCACCAAGACTCTTAACCGTGG
TACCTCCGAGCTCGTTATCCTCGCTGCCGACACCTCTCCCCTCGCTATCC
TCCTCCACATCCCCCTCCTTGCTGAGGACAAGAACACCCCTTATGTCTTC
GTGCCCAGCAAGCTTGCTCTCGGCCGTGCTACCGGTGTTTCCCGCCCCGT
GATTGCGGCCAGTATCACCACCAACGAGGCCAGTGACCTCCAGGGCCAGA
TCAAGACCATCAAGGACAAGGTCGAGAGACTGATGATCTAACCTGGCCCC
TCGCCGATGAGGCCCTCACCCAGAACCTCCTGGACCTTGTCCAGCAGGCC
GGTCACTACCGCCAGCTGAAGAAGGGTGCTAACGAGGATGTCTGAGACTT
CTGCCGCCACCAAGACTCTTAACCGTGGTACCTCCGAGCTCGTTATCCTC
GCTGCCGACACCTCTCCCCTCGCTATCCTCCTCCACATCCCCCTCCTTGC
TGAGGACAAGAACACCCCTTATGTCTTCGTGCCCAGCAAGCTTGCTCTCG
GCCGTGCTACCGGTGTTTCCCGCCCCGTGATTGCGGCCAGTATCACCACC
AACGAGGCCAGTGACCTCCAGGGCCAGATCAAGACCATCAAGGACAAGGT
CGAGAGACTGATGATCTAACCTGGCCCCTCGCCGATGAGGCCCTCACCCA
GAACCTCCTGGACCTTGTCCAGCAGGCCGGTCACTACCGCCAGCTGAAGA
AGGGTGCTAACGAGGATGTCTGAGACTTCTGCCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005730nucleolus
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SNU13KYF_005107Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_005107-T1KYF_005107-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_005107-T1.cdsKYF_005107-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_005107-T1.exon3KYF_005107-T1.exon3Aspergillus niger KYF3exon
KYF_005107-T1.exon2KYF_005107-T1.exon2Aspergillus niger KYF3exon
KYF_005107-T1.exon1KYF_005107-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
DBxrefInterPro:IPR004038
DBxrefInterPro:IPR029064
DBxrefInterPro:IPR002415
DBxrefInterPro:IPR018492
DBxrefPFAM:PF01248
ProductRNA binding protein snu13
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:2683902..2684391 -
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