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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2793466..2794299- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_005136-T1 ID=KYF_005136-T1|Name=KYF_005136-T1|organism=Aspergillus niger KYF3|type=mRNA|length=834bp|location=Sequence derived from alignment at ch4:2793466..2794299- (Aspergillus niger KYF3)
ATGACCGACACAGCAGATGCCCCCCAAACCAACAAGGCCTTCGTGCCCCT
CGGTACCCCCTCCTTCCCTCCCCCCAAAACACCACATATAACCACACCAA
CTAACCATTATCACCACTATTATTGCACCACAGAAAATAACCCCGAAGTA
ATGACCCACCTCGTCCGCCAACTCGGCCTCTCCCCAACCCTCGGCTTCAC
AGACGTGTGGTCAATCGACAGCCCGGACCTCCTCGCCTTCATCCCCCGCC
CCTCCTACGCCCTCCTCCTCGTCTTCCCCGTCTCCGCCGCCTACGAAGCC
ACCCGCCGAACCGAAGACGCGCCTCTCCCTGATTACACCGGCTCAGGTCC
CAACGAGCCCGTCATGTGGTTCAAGCAAACCATCCGCAACGCCTGCGGGC
TAATCGGGCTCCTGCACGCCGTGTCGAACGGCACGCCGCGGAAGCACATC
ACCCCTGGGTCCGATCTAGATAACCTGCTCAAGGAAGCGGAGGGTTTGGG
GCCGATTCAGCGCGCGGATCTGTTGTATGAGAGTAAGGCGTTGGAGAGTG
CGCATGCCGATGCGGCGAAACTGGGGGATACGGATGCGCCGGCGGCCGAG
GACTCGGTGGACTTGCATTTTGTGGCGTTTGTGAAGGGTGAGGATGGGAC
TTTGTGGGAGTTGGATGGGAGGAGGAAGGGGCCGTTGGTTAGGGGGGTTC
TTGAGGAGGGGGAGGATGCGTTGAGTGAGAGGGCTTTGCAGTTGGGGGTA
AGAAGGTTCTTGGAGGTCGAGAAGGGGAGCGGGGATGGAGATTTGAGGTT
TAGTCTTGTTAGTTTGGGGGAGGTTTTTGACTGA back to topCoding sequence (CDS) from alignment at ch4:2793466..2794299- >KYF_005136-T1 ID=KYF_005136-T1|Name=KYF_005136-T1|organism=Aspergillus niger KYF3|type=CDS|length=1506bp|location=Sequence derived from alignment at ch4:2793466..2794299- (Aspergillus niger KYF3)
AAAATAACCCCGAAGTAATGACCCACCTCGTCCGCCAACTCGGCCTCTCC
CCAACCCTCGGCTTCACAGACGTGTGGTCAATCGACAGCCCGGACCTCCT
CGCCTTCATCCCCCGCCCCTCCTACGCCCTCCTCCTCGTCTTCCCCGTCT
CCGCCGCCTACGAAGCCACCCGCCGAACCGAAGACGCGCCTCTCCCTGAT
TACACCGGCTCAGGTCCCAACGAGCCCGTCATGTGGTTCAAGCAAACCAT
CCGCAACGCCTGCGGGCTAATCGGGCTCCTGCACGCCGTGTCGAACGGCA
CGCCGCGGAAGCACATCACCCCTGGGTCCGATCTAGATAACCTGCTCAAG
GAAGCGGAGGGTTTGGGGCCGATTCAGCGCGCGGATCTGTTGTATGAGAG
TAAGGCGTTGGAGAGTGCGCATGCCGATGCGGCGAAACTGGGGGATACGG
ATGCGCCGGCGGCCGAGGACTCGGTGGACTTGCATTTTGTGGCGTTTGTG
AAGGGTGAGGATGGGACTTTGTGGGAGTTGGATGGGAGGAGGAAGGGGCC
GTTGGTTAGGGGGGTTCTTGAGGAGGGGGAGGATGCGTTGAGTGAGAGGG
CTTTGCAGTTGGGGGTAAGAAGGTTCTTGGAGGTCGAGAAGGGGAGCGGG
GATGGAGATTTGAGGTTTAGTCTTGTTAGTTTGGGGGAGGTTTTTGACTG
AATGACCGACACAGCAGATGCCCCCCAAACCAACAAGGCCTTCGTGCCCC
TCGAAAATAACCCCGAAGTAATGACCCACCTCGTCCGCCAACTCGGCCTC
TCCCCAACCCTCGGCTTCACAGACGTGTGGTCAATCGACAGCCCGGACCT
CCTCGCCTTCATCCCCCGCCCCTCCTACGCCCTCCTCCTCGTCTTCCCCG
TCTCCGCCGCCTACGAAGCCACCCGCCGAACCGAAGACGCGCCTCTCCCT
GATTACACCGGCTCAGGTCCCAACGAGCCCGTCATGTGGTTCAAGCAAAC
CATCCGCAACGCCTGCGGGCTAATCGGGCTCCTGCACGCCGTGTCGAACG
GCACGCCGCGGAAGCACATCACCCCTGGGTCCGATCTAGATAACCTGCTC
AAGGAAGCGGAGGGTTTGGGGCCGATTCAGCGCGCGGATCTGTTGTATGA
GAGTAAGGCGTTGGAGAGTGCGCATGCCGATGCGGCGAAACTGGGGGATA
CGGATGCGCCGGCGGCCGAGGACTCGGTGGACTTGCATTTTGTGGCGTTT
GTGAAGGGTGAGGATGGGACTTTGTGGGAGTTGGATGGGAGGAGGAAGGG
GCCGTTGGTTAGGGGGGTTCTTGAGGAGGGGGAGGATGCGTTGAGTGAGA
GGGCTTTGCAGTTGGGGGTAAGAAGGTTCTTGGAGGTCGAGAAGGGGAGC
GGGGATGGAGATTTGAGGTTTAGTCTTGTTAGTTTGGGGGAGGTTTTTGA
CTGAATGACCGACACAGCAGATGCCCCCCAAACCAACAAGGCCTTCGTGC
CCCTCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004843 | thiol-dependent ubiquitin-specific protease activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006511 | ubiquitin-dependent protein catabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | MEROPS:MER0000836 |
| DBxref | InterPro:IPR038765 |
| DBxref | InterPro:IPR036959 |
| DBxref | InterPro:IPR001578 |
| DBxref | PFAM:PF01088 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:2793466..2794299 - |
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