You are here

Home

KYF_005201-T1, KYF_005201-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_005201-T1
Unique NameKYF_005201-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:2975368..2976273+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_005201-T1 ID=KYF_005201-T1|Name=KYF_005201-T1|organism=Aspergillus niger KYF3|type=mRNA|length=906bp|location=Sequence derived from alignment at ch4:2975368..2976273+ (Aspergillus niger KYF3)
ATGTTTCTCAACACTGGCCTCTCGCGAAAATTCCTCAAACCATATGTCGC
CGAGTTCCTTGGAACGGCACTCCTGATCGTCATCGGCGATGGCGTCGTCG
CTCAGTGTCTCCTTTCCGACTACCAGTACGGCACTTGGCTATCGATCAAC
ATCGCCTGGGCTGCAGCTGTCTGCATCTCAGGCTACCTTTCCGACCCCGG
TCCAACCATCAACCCAGCTGTGACTATCTGCATGGCTCTTGTCCGTCCCA
CTCCCGGACAATGGCGTAAACTTCCCGGCAAGCTCTTTGCTCAATTTCTT
GGTGGATTTGTTGGTGCTGCCATTGTGTATATCAACTACCGCTCCGCCAT
CAAAGACTGGGATCCCGAGTTTACCATTCCTGGCGGCTCAATCCTGAGCC
CTCGTGGACATCATTCTGCCGGTATCTTCTCAACTTATCCTGCTGCATTC
TTCGAATCGAACTGGGAGGCCGCATTCTCGGAGTTGCTTGGGTCTGCAGT
TCTGATGTTTGGCATCTTGAGCATCTCGGATCCGGTCAATGCCGTCAGAT
TCCATTCGCCTCAGGTGACGGTATTCTTCTTGCTTACTGCTATTGGAGCT
GCGTTGGGCTGGCAGACTGGCTATGTAGGTTCCTCCGATAATTGAGTTCA
GTGATCGAAGCTAAATCTACAGGCTATCAACCCCGCGAGAGATTTCGGTC
CCAGGCTGTTCTCTGCTTTCATCTATGGCAGGGAGGTTTTTACCGCGGCC
AATTATTACTTCGTTGTGCCCATCTTTGCCCCCATTGTAGGTTGTATCGT
CGGAGCTGCCACTTACGACACATTCCTCTATGAGGGAGACGGGTCGCGCA
TCACCGATGCTCTGGACAATGTCGAGGATCGCGACGGTGCTCTGCGGCTG
CACTAA
back to top

Coding sequence (CDS) from alignment at ch4:2975368..2976273+

>KYF_005201-T1 ID=KYF_005201-T1|Name=KYF_005201-T1|organism=Aspergillus niger KYF3|type=CDS|length=1716bp|location=Sequence derived from alignment at ch4:2975368..2976273+ (Aspergillus niger KYF3)
ATGTTTCTCAACACTGGCCTCTCGCGAAAATTCCTCAAACCATATGTCGC
CGAGTTCCTTGGAACGGCACTCCTGATCGTCATCGGCGATGGCGTCGTCG
CTCAGTGTCTCCTTTCCGACTACCAGTACGGCACTTGGCTATCGATCAAC
ATCGCCTGGGCTGCAGCTGTCTGCATCTCAGGCTACCTTTCCGACCCCGG
TCCAACCATCAACCCAGCTGTGACTATCTGCATGGCTCTTGTCCGTCCCA
CTCCCGGACAATGGCGTAAACTTCCCGGCAAGCTCTTTGCTCAATTTCTT
GGTGGATTTGTTGGTGCTGCCATTGTGTATATCAACTACCGCTCCGCCAT
CAAAGACTGGGATCCCGAGTTTACCATTCCTGGCGGCTCAATCCTGAGCC
CTCGTGGACATCATTCTGCCGGTATCTTCTCAACTTATCCTGCTGCATTC
TTCGAATCGAACTGGGAGGCCGCATTCTCGGAGTTGCTTGGGTCTGCAGT
TCTGATGTTTGGCATCTTGAGCATCTCGGATCCGGTCAATGCCGTCAGAT
TCCATTCGCCTCAGGTGACGGTATTCTTCTTGCTTACTGCTATTGGAGCT
GCGTTGGGCTGGCAGACTGGCTATGCTATCAACCCCGCGAGAGATTTCGG
TCCCAGGCTGTTCTCTGCTTTCATCTATGGCAGGGAGGTTTTTACCGCGG
CCAATTATTACTTCGTTGTGCCCATCTTTGCCCCCATTGTAGGTTGTATC
GTCGGAGCTGCCACTTACGACACATTCCTCTATGAGGGAGACGGGTCGCG
CATCACCGATGCTCTGGACAATGTCGAGGATCGCGACGGTGCTCTGCGGC
TGCACTAAATGTTTCTCAACACTGGCCTCTCGCGAAAATTCCTCAAACCA
TATGTCGCCGAGTTCCTTGGAACGGCACTCCTGATCGTCATCGGCGATGG
CGTCGTCGCTCAGTGTCTCCTTTCCGACTACCAGTACGGCACTTGGCTAT
CGATCAACATCGCCTGGGCTGCAGCTGTCTGCATCTCAGGCTACCTTTCC
GACCCCGGTCCAACCATCAACCCAGCTGTGACTATCTGCATGGCTCTTGT
CCGTCCCACTCCCGGACAATGGCGTAAACTTCCCGGCAAGCTCTTTGCTC
AATTTCTTGGTGGATTTGTTGGTGCTGCCATTGTGTATATCAACTACCGC
TCCGCCATCAAAGACTGGGATCCCGAGTTTACCATTCCTGGCGGCTCAAT
CCTGAGCCCTCGTGGACATCATTCTGCCGGTATCTTCTCAACTTATCCTG
CTGCATTCTTCGAATCGAACTGGGAGGCCGCATTCTCGGAGTTGCTTGGG
TCTGCAGTTCTGATGTTTGGCATCTTGAGCATCTCGGATCCGGTCAATGC
CGTCAGATTCCATTCGCCTCAGGTGACGGTATTCTTCTTGCTTACTGCTA
TTGGAGCTGCGTTGGGCTGGCAGACTGGCTATGCTATCAACCCCGCGAGA
GATTTCGGTCCCAGGCTGTTCTCTGCTTTCATCTATGGCAGGGAGGTTTT
TACCGCGGCCAATTATTACTTCGTTGTGCCCATCTTTGCCCCCATTGTAG
GTTGTATCGTCGGAGCTGCCACTTACGACACATTCCTCTATGAGGGAGAC
GGGTCGCGCATCACCGATGCTCTGGACAATGTCGAGGATCGCGACGGTGC
TCTGCGGCTGCACTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0015267channel activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_005201KYF_005201Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_005201-T1.exon1KYF_005201-T1.exon1Aspergillus niger KYF3exon
KYF_005201-T1.exon2KYF_005201-T1.exon2Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_005201-T1.cdsKYF_005201-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_005201-T1KYF_005201-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR023271
DBxrefInterPro:IPR000425
DBxrefPFAM:PF00230
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:2975368..2976273 +
Powered by Drupal