|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3018171..3019341- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_005218-T1 ID=KYF_005218-T1|Name=KYF_005218-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1171bp|location=Sequence derived from alignment at ch4:3018171..3019341- (Aspergillus niger KYF3) ATGACTATTGTCCGTCAGACCGAACACCCAGTGGAGGTCCATGATACCGG
CCTCCCACAGAACAACTGGAGTACACCCGGTCGAGCCGCATACGACTTCC
GGTCTGATTTCGTTACCTCCCCGAATATGAGCATGCTCGAATCCATCGTC
AACACAACACTTCTCGACGATGAGATGATGGAGGATCCAACCACTAACTA
TTTCCAGGAGTGGATGGCTCAGTTGACAGGCCATGAAAGGGCGCTCCTTA
CTTATTCGGGAACTATGAGCAACCAGGTGGCACTCCGGACGGCTCTCACC
ACCCCACCATACTCCATCCTTGCAGACCATCGCAGCCATATCCTGAACAT
GGAGGCAGGTGGGGCAGCGACTGTTTGTGGCGCTCTAATCCACGGTGTCA
TCCCAGCAAATGGCCATCATTTGACGCTGGAAGACATCAAGAAGCACTTT
GTCTTCAAGAAAGATATCTGTGAGTGAGATGACGTGTTGATTTACTTTTT
CTAATACTGCGTGCATAGATGACTGCCCCACTCGCGTTATAAGCCTCGAG
AACACCCTCTTCGGAACGATTATGCCCCTTGACGAAATCCGAGATATCTC
ATTGTGGGCTAAGACCCAAGACCCACCGGTTCACATGCATCTCGATGGAG
CAAGACTTTGGGAGGCCGTCGCTGCAGGTGCAGGTGCTCTTCATGAGTTT
TGTGCCTGCTTTGACAGCATTTCGCTGTGCTTCACCAAGGGTCTGGGAGC
ACCCATCGGATCTGTGATTGTAGGAAACACAGAATTCATCACAAGGGCAA
GGTGGATGCGTAAGCTGCTCGGTGGTGGACTGCGCCAAACAGGGATCATT
TCGGCGCCGATGTGCGTTGCACTCGAGGAAGTATTCTTAGGGGGCAAGCT
GAAACGGTGCCAAGAGAGAGCGAAATATATCTCTACAATGTGGGAACGTC
TAGGGGGGTCTTTGCTAAGACCCACAGAGACAAACATGATGTGGATGAAC
CTGAACGATGGAAATGTCGACAAGAAAGCATTCCAAAAAGTAGCAAAAGA
GCTAGGGCTCAAGGTGCACGAGAAAGAACGCTTAGAAGGACGGTTGGTAG
TGCATTATCAGATATCTGATGACGCTATCAAGAAGTTGGAAATTGCGATG
AGGGCTGCATTGAGTTGTTGA back to topCoding sequence (CDS) from alignment at ch4:3018171..3019341- >KYF_005218-T1 ID=KYF_005218-T1|Name=KYF_005218-T1|organism=Aspergillus niger KYF3|type=CDS|length=2244bp|location=Sequence derived from alignment at ch4:3018171..3019341- (Aspergillus niger KYF3) ATGACTGCCCCACTCGCGTTATAAGCCTCGAGAACACCCTCTTCGGAACG ATTATGCCCCTTGACGAAATCCGAGATATCTCATTGTGGGCTAAGACCCA AGACCCACCGGTTCACATGCATCTCGATGGAGCAAGACTTTGGGAGGCCG TCGCTGCAGGTGCAGGTGCTCTTCATGAGTTTTGTGCCTGCTTTGACAGC ATTTCGCTGTGCTTCACCAAGGGTCTGGGAGCACCCATCGGATCTGTGAT TGTAGGAAACACAGAATTCATCACAAGGGCAAGGTGGATGCGTAAGCTGC TCGGTGGTGGACTGCGCCAAACAGGGATCATTTCGGCGCCGATGTGCGTT GCACTCGAGGAAGTATTCTTAGGGGGCAAGCTGAAACGGTGCCAAGAGAG AGCGAAATATATCTCTACAATGTGGGAACGTCTAGGGGGGTCTTTGCTAA GACCCACAGAGACAAACATGATGTGGATGAACCTGAACGATGGAAATGTC GACAAGAAAGCATTCCAAAAAGTAGCAAAAGAGCTAGGGCTCAAGGTGCA CGAGAAAGAACGCTTAGAAGGACGGTTGGTAGTGCATTATCAGATATCTG ATGACGCTATCAAGAAGTTGGAAATTGCGATGAGGGCTGCATTGAGTTGT TGAATGACTATTGTCCGTCAGACCGAACACCCAGTGGAGGTCCATGATAC CGGCCTCCCACAGAACAACTGGAGTACACCCGGTCGAGCCGCATACGACT TCCGGTCTGATTTCGTTACCTCCCCGAATATGAGCATGCTCGAATCCATC GTCAACACAACACTTCTCGACGATGAGATGATGGAGGATCCAACCACTAA CTATTTCCAGGAGTGGATGGCTCAGTTGACAGGCCATGAAAGGGCGCTCC TTACTTATTCGGGAACTATGAGCAACCAGGTGGCACTCCGGACGGCTCTC ACCACCCCACCATACTCCATCCTTGCAGACCATCGCAGCCATATCCTGAA CATGGAGGCAGGTGGGGCAGCGACTGTTTGTGGCGCTCTAATCCACGGTG TCATCCCAGCAAATGGCCATCATTTGACGCTGGAAGACATCAAGAAGCAC TTTGTCTTCAAGAAAGATATCTATGACTGCCCCACTCGCGTTATAAGCCT CGAGAACACCCTCTTCGGAACGATTATGCCCCTTGACGAAATCCGAGATA TCTCATTGTGGGCTAAGACCCAAGACCCACCGGTTCACATGCATCTCGAT GGAGCAAGACTTTGGGAGGCCGTCGCTGCAGGTGCAGGTGCTCTTCATGA GTTTTGTGCCTGCTTTGACAGCATTTCGCTGTGCTTCACCAAGGGTCTGG GAGCACCCATCGGATCTGTGATTGTAGGAAACACAGAATTCATCACAAGG GCAAGGTGGATGCGTAAGCTGCTCGGTGGTGGACTGCGCCAAACAGGGAT CATTTCGGCGCCGATGTGCGTTGCACTCGAGGAAGTATTCTTAGGGGGCA AGCTGAAACGGTGCCAAGAGAGAGCGAAATATATCTCTACAATGTGGGAA CGTCTAGGGGGGTCTTTGCTAAGACCCACAGAGACAAACATGATGTGGAT GAACCTGAACGATGGAAATGTCGACAAGAAAGCATTCCAAAAAGTAGCAA AAGAGCTAGGGCTCAAGGTGCACGAGAAAGAACGCTTAGAAGGACGGTTG GTAGTGCATTATCAGATATCTGATGACGCTATCAAGAAGTTGGAAATTGC GATGAGGGCTGCATTGAGTTGTTGAATGACTATTGTCCGTCAGACCGAAC ACCCAGTGGAGGTCCATGATACCGGCCTCCCACAGAACAACTGGAGTACA CCCGGTCGAGCCGCATACGACTTCCGGTCTGATTTCGTTACCTCCCCGAA TATGAGCATGCTCGAATCCATCGTCAACACAACACTTCTCGACGATGAGA TGATGGAGGATCCAACCACTAACTATTTCCAGGAGTGGATGGCTCAGTTG ACAGGCCATGAAAGGGCGCTCCTTACTTATTCGGGAACTATGAGCAACCA GGTGGCACTCCGGACGGCTCTCACCACCCCACCATACTCCATCCTTGCAG ACCATCGCAGCCATATCCTGAACATGGAGGCAGGTGGGGCAGCGACTGTT TGTGGCGCTCTAATCCACGGTGTCATCCCAGCAAATGGCCATCATTTGAC GCTGGAAGACATCAAGAAGCACTTTGTCTTCAAGAAAGATATCT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
Term | Definition |
GO:0006520 | cellular amino acid metabolic process |
Vocabulary: Molecular Function
Term | Definition |
GO:0016829 | lyase activity |
GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
Property Name | Value |
DBxref | InterPro:IPR015424 |
DBxref | InterPro:IPR001597 |
DBxref | InterPro:IPR015422 |
DBxref | InterPro:IPR023603 |
DBxref | InterPro:IPR015421 |
DBxref | PFAM:PF01212 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch4 | supercontig | ch4:3018171..3019341 - |
|