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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3135219..3136130- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_005252-T1 ID=KYF_005252-T1|Name=KYF_005252-T1|organism=Aspergillus niger KYF3|type=mRNA|length=912bp|location=Sequence derived from alignment at ch4:3135219..3136130- (Aspergillus niger KYF3)
ATGTCTATGGACGCCAAAGAAATCGAGCTCCGGGCCAAGGCCATGACCAA
GGCCGCCTCTTCCAACGAACCTCCCTCTACCATCATACCACTACTCAAGC
AACTGCAACAAGGGGTGAAAGCCACCGAAGACCTGCTGCGATCGACCCGT
GTCGGTATCGCCGTCAACAAACTTAAACAACACAAATCTCCCGAAGTCGC
CCGTCTCGCGAGCGAAATCGTCTCCAAGTGGCGCCACGAAGTGAACAAGC
ACAAGGCCGGGGCTTCCCCCGGCGCTAGCCAACGGTCGAGCAGCTCTCCC
CACCCGAAAACCAACGGCACCCCCTCCGGCGGTGCGACTCCCTCCGATAA
GGCCTCGAAGCTCTCGGTGCCTCCCGACAAGCGTACCTGGAAGGCCGATG
GCGTGGACACCAACCAGACCGGCAACAGAATTCGCGACAGCTGCATCGGC
TTGATGTACGATGGGCTGTGTCTCAACTCGGTTGAACCCCCCCGCACAGT
CCTGTCCAAGGCGTCGGCCGTCGAAGCGGCAGCCTTTAGCGACCTCGGAC
CGGAAACGAAGGAACAATACCGCACGAAGATCCGCAGTCTCTACCAGAAC
CTCAAGAACAAATCGAACCCGACACTGCGAGTGCGGGTCCTCAACGGCGA
CGTGACGCCAGAACAGTTCGTCCGGATGTCGCACGACGAACTCCGGTCGG
CGGAACAGCAGGAGCGCGACCGCAAGATTCAAAAGGAGAACATGGACAAG
GCGATGGTGGCACAGGCGGAGCGGAGTATCAGTACGAGCTTGCAATGTGG
CAAGTGTGGACAGCGCAAGGTGACATATACGGAAGCGCAGACGCGCAGTG
CGGACGAACCGATGACATTGTTTTGTACGTGTATGAACTGCGGCAAGTCA
TGGAAGCAGTGA back to topCoding sequence (CDS) from alignment at ch4:3135219..3136130- >KYF_005252-T1 ID=KYF_005252-T1|Name=KYF_005252-T1|organism=Aspergillus niger KYF3|type=CDS|length=912bp|location=Sequence derived from alignment at ch4:3135219..3136130- (Aspergillus niger KYF3)
ATGTCTATGGACGCCAAAGAAATCGAGCTCCGGGCCAAGGCCATGACCAA
GGCCGCCTCTTCCAACGAACCTCCCTCTACCATCATACCACTACTCAAGC
AACTGCAACAAGGGGTGAAAGCCACCGAAGACCTGCTGCGATCGACCCGT
GTCGGTATCGCCGTCAACAAACTTAAACAACACAAATCTCCCGAAGTCGC
CCGTCTCGCGAGCGAAATCGTCTCCAAGTGGCGCCACGAAGTGAACAAGC
ACAAGGCCGGGGCTTCCCCCGGCGCTAGCCAACGGTCGAGCAGCTCTCCC
CACCCGAAAACCAACGGCACCCCCTCCGGCGGTGCGACTCCCTCCGATAA
GGCCTCGAAGCTCTCGGTGCCTCCCGACAAGCGTACCTGGAAGGCCGATG
GCGTGGACACCAACCAGACCGGCAACAGAATTCGCGACAGCTGCATCGGC
TTGATGTACGATGGGCTGTGTCTCAACTCGGTTGAACCCCCCCGCACAGT
CCTGTCCAAGGCGTCGGCCGTCGAAGCGGCAGCCTTTAGCGACCTCGGAC
CGGAAACGAAGGAACAATACCGCACGAAGATCCGCAGTCTCTACCAGAAC
CTCAAGAACAAATCGAACCCGACACTGCGAGTGCGGGTCCTCAACGGCGA
CGTGACGCCAGAACAGTTCGTCCGGATGTCGCACGACGAACTCCGGTCGG
CGGAACAGCAGGAGCGCGACCGCAAGATTCAAAAGGAGAACATGGACAAG
GCGATGGTGGCACAGGCGGAGCGGAGTATCAGTACGAGCTTGCAATGTGG
CAAGTGTGGACAGCGCAAGGTGACATATACGGAAGCGCAGACGCGCAGTG
CGGACGAACCGATGACATTGTTTTGTACGTGTATGAACTGCGGCAAGTCA
TGGAAGCAGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
| GO:0006351 | transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092645TJ |
| DBxref | InterPro:IPR006289 |
| DBxref | InterPro:IPR035441 |
| DBxref | InterPro:IPR036575 |
| DBxref | InterPro:IPR017923 |
| DBxref | InterPro:IPR035100 |
| DBxref | InterPro:IPR003618 |
| DBxref | InterPro:IPR001222 |
| DBxref | InterPro:IPR003617 |
| DBxref | PFAM:PF07500 |
| DBxref | PFAM:PF01096 |
| DBxref | PFAM:PF08711 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:3135219..3136130 - |
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